RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 MEP1AQ16819 746 aa12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 TOR1AIP1Q5JTV8 583 aa12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 SULT1C3Q6IMI6 304 aa12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 ISCA2Q86U28 154 aa12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 RELTQ969Z4 430 aa12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 GAL3ST3Q96A11 431 aa12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 ESAMQ96AP7 390 aa12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 SCMH1Q96GD3 660 aa12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 PTCHD1Q96NR3 888 aa12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 NPLQ9BXD5 320 aaPredicted RBP12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 RAB17Q9H0T7 212 aa12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 RHBGQ9H310 441 aa12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 TRIM45Q9H8W5 580 aaPredicted RBP12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 PRDM9Q9NQV7 894 aa12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 DNAJC11Q9NVH1 559 aa12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 ASB1Q9Y576 335 aa12.82□□□□□ -0.36
TNFRSF1A-202ENST00000366159 SVILO95425 2214 aa12.81□□□□□ -0.36
TNFRSF1A-202ENST00000366159 CROCCQ5TZA2 2017 aa12.81□□□□□ -0.36
TNFRSF1A-202ENST00000366159 SAGE2PA6NJ88 616 aa12.81□□□□□ -0.36
TNFRSF1A-202ENST00000366159 H2AFYO75367 372 aaKnown RBP12.81□□□□□ -0.36
TNFRSF1A-202ENST00000366159 STK16O75716 305 aa12.81□□□□□ -0.36
TNFRSF1A-202ENST00000366159 NEURL1O76050 574 aa12.81□□□□□ -0.36
TNFRSF1A-202ENST00000366159 HSPA7P48741 367 aa12.81□□□□□ -0.36
TNFRSF1A-202ENST00000366159 STXBP1P61764 594 aaKnown RBP12.81□□□□□ -0.36
TNFRSF1A-202ENST00000366159 BTN3A2P78410 334 aa12.81□□□□□ -0.36
TNFRSF1A-202ENST00000366159 DOC2AQ14183 400 aa12.81□□□□□ -0.36
TNFRSF1A-202ENST00000366159 FBXO48Q5FWF7 155 aa12.81□□□□□ -0.36
TNFRSF1A-202ENST00000366159 ZNF766Q5HY98 468 aa12.81□□□□□ -0.36
TNFRSF1A-202ENST00000366159 ADNP2Q6IQ32 1131 aa12.81□□□□□ -0.36
TNFRSF1A-202ENST00000366159 SCUBE1Q8IWY4 988 aa12.81□□□□□ -0.36
TNFRSF1A-202ENST00000366159 KRT78Q8N1N4 520 aa12.81□□□□□ -0.36
TNFRSF1A-202ENST00000366159 KIF2BQ8N4N8 673 aa12.81□□□□□ -0.36
TNFRSF1A-202ENST00000366159 SUN3Q8TAQ9 357 aa12.81□□□□□ -0.36
TNFRSF1A-202ENST00000366159 FBF1Q8TES7 1133 aa12.81□□□□□ -0.36
TNFRSF1A-202ENST00000366159 MAGEB10Q96LZ2 347 aaPredicted RBP12.81□□□□□ -0.36
TNFRSF1A-202ENST00000366159 ATOH8Q96SQ7 321 aa12.81□□□□□ -0.36
TNFRSF1A-202ENST00000366159 CNOT10Q9H9A5 744 aaKnown RBP12.81□□□□□ -0.36
TNFRSF1A-202ENST00000366159 ZDHHC18Q9NUE0 388 aa12.81□□□□□ -0.36
TNFRSF1A-202ENST00000366159 TXNDC16Q9P2K2 825 aa12.81□□□□□ -0.36
TNFRSF1A-202ENST00000366159 PPIEQ9UNP9 301 aaKnown RBP12.81□□□□□ -0.36
TNFRSF1A-202ENST00000366159 HMX2A2RU54 273 aa12.8□□□□□ -0.36
TNFRSF1A-202ENST00000366159 ASPDHA6ND91 283 aa12.8□□□□□ -0.36
TNFRSF1A-202ENST00000366159 TGFBR3LH3BV60 316 aa12.8□□□□□ -0.36
TNFRSF1A-202ENST00000366159 CRYABP02511 175 aaKnown RBP12.8□□□□□ -0.36
TNFRSF1A-202ENST00000366159 UQCRHP07919 91 aa12.8□□□□□ -0.36
TNFRSF1A-202ENST00000366159 MYBL2P10244 700 aa12.8□□□□□ -0.36
TNFRSF1A-202ENST00000366159 COL8A1P27658 744 aa12.8□□□□□ -0.36
TNFRSF1A-202ENST00000366159 GPR143P51810 404 aa12.8□□□□□ -0.36
TNFRSF1A-202ENST00000366159 KCNK10P57789 538 aa12.8□□□□□ -0.36
TNFRSF1A-202ENST00000366159 SRSF11Q05519 484 aaKnown RBP12.8□□□□□ -0.36
TNFRSF1A-202ENST00000366159 NAB1Q13506 487 aa12.8□□□□□ -0.36
TNFRSF1A-202ENST00000366159 TBCCQ15814 346 aa12.8□□□□□ -0.36
TNFRSF1A-202ENST00000366159 ZNF468Q5VIY5 522 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF1A-202ENST00000366159 SPINK14Q6IE38 97 aa12.8□□□□□ -0.36
TNFRSF1A-202ENST00000366159 ABHD17CQ6PCB6 329 aa12.8□□□□□ -0.36
TNFRSF1A-202ENST00000366159 CMC1Q7Z7K0 106 aa12.8□□□□□ -0.36
TNFRSF1A-202ENST00000366159 RPS19BP1Q86WX3 136 aaKnown RBP12.8□□□□□ -0.36
TNFRSF1A-202ENST00000366159 ZNF227Q86WZ6 799 aa12.8□□□□□ -0.36
TNFRSF1A-202ENST00000366159 CTAGE3PQ8IX95 158 aa12.8□□□□□ -0.36
TNFRSF1A-202ENST00000366159 SLC5A8Q8N695 610 aa12.8□□□□□ -0.36
TNFRSF1A-202ENST00000366159 PPM1NQ8N819 430 aa12.8□□□□□ -0.36
TNFRSF1A-202ENST00000366159 APCDD1LQ8NCL9 501 aa12.8□□□□□ -0.36
TNFRSF1A-202ENST00000366159 TMEM52Q8NDY8 209 aa12.8□□□□□ -0.36
TNFRSF1A-202ENST00000366159 OR2L5Q8NG80 312 aa12.8□□□□□ -0.36
TNFRSF1A-202ENST00000366159 PTCD3Q96EY7 689 aaKnown RBP12.8□□□□□ -0.36
TNFRSF1A-202ENST00000366159 HES7Q9BYE0 225 aa12.8□□□□□ -0.36
TNFRSF1A-202ENST00000366159 CD244Q9BZW8 370 aa12.8□□□□□ -0.36
TNFRSF1A-202ENST00000366159 CDCP1Q9H5V8 836 aa12.8□□□□□ -0.36
TNFRSF1A-202ENST00000366159 PRDM7Q9NQW5 492 aa12.8□□□□□ -0.36
TNFRSF1A-202ENST00000366159 IGSF5Q9NSI5 407 aa12.8□□□□□ -0.36
TNFRSF1A-202ENST00000366159 WWOXQ9NZC7 414 aa12.8□□□□□ -0.36
TNFRSF1A-202ENST00000366159 MMACHCQ9Y4U1 282 aa12.8□□□□□ -0.36
TNFRSF1A-202ENST00000366159 LRBAP50851 2863 aa12.79□□□□□ -0.36
TNFRSF1A-202ENST00000366159 GABRR3A8MPY1 467 aa12.79□□□□□ -0.36
TNFRSF1A-202ENST00000366159 CYR61O00622 381 aa12.79□□□□□ -0.36
TNFRSF1A-202ENST00000366159 CLGNO14967 610 aa12.79□□□□□ -0.36
TNFRSF1A-202ENST00000366159 ERI3O43414 337 aaKnown RBP12.79□□□□□ -0.36
TNFRSF1A-202ENST00000366159 MTHFD2P13995 350 aa12.79□□□□□ -0.36
TNFRSF1A-202ENST00000366159 STX2P32856 288 aa12.79□□□□□ -0.36
TNFRSF1A-202ENST00000366159 TRHRP34981 398 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF1A-202ENST00000366159 ST13P50502 369 aaKnown RBP12.79□□□□□ -0.36
TNFRSF1A-202ENST00000366159 HNRNPFP52597 415 aaKnown RBP12.79□□□□□ -0.36
TNFRSF1A-202ENST00000366159 HSD17B7P56937 341 aa12.79□□□□□ -0.36
TNFRSF1A-202ENST00000366159 MLF1P58340 268 aa12.79□□□□□ -0.36
TNFRSF1A-202ENST00000366159 PMP22Q01453 160 aa12.79□□□□□ -0.36
TNFRSF1A-202ENST00000366159 TERF2Q15554 542 aa12.79□□□□□ -0.36
TNFRSF1A-202ENST00000366159 OR1C1Q15619 314 aa12.79□□□□□ -0.36
TNFRSF1A-202ENST00000366159 ZRSR2Q15696 482 aaKnown RBP12.79□□□□□ -0.36
TNFRSF1A-202ENST00000366159 PDK4Q16654 411 aa12.79□□□□□ -0.36
TNFRSF1A-202ENST00000366159 UBE3DQ7Z6J8 389 aa12.79□□□□□ -0.36
TNFRSF1A-202ENST00000366159 STAG3L4Q8TBR4 150 aa12.79□□□□□ -0.36
TNFRSF1A-202ENST00000366159 UBTD2Q8WUN7 234 aa12.79□□□□□ -0.36
TNFRSF1A-202ENST00000366159 UTP23Q9BRU9 249 aaKnown RBP12.79□□□□□ -0.36
TNFRSF1A-202ENST00000366159 LRRC1Q9BTT6 524 aa12.79□□□□□ -0.36
TNFRSF1A-202ENST00000366159 EFCAB11Q9BUY7 163 aa12.79□□□□□ -0.36
TNFRSF1A-202ENST00000366159 REXO4Q9GZR2 422 aaKnown RBP12.79□□□□□ -0.36
TNFRSF1A-202ENST00000366159 ALG9Q9H6U8 611 aa12.79□□□□□ -0.36
TNFRSF1A-202ENST00000366159 ANKRD10Q9NXR5 420 aa12.79□□□□□ -0.36
TNFRSF1A-202ENST00000366159 CD274Q9NZQ7 290 aa12.79□□□□□ -0.36
TNFRSF1A-202ENST00000366159 KCMF1Q9P0J7 381 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms