RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 GPR33Q49SQ1 333 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 C10orf62Q5T681 223 aaPredicted RBP10.14□□□□□ -0.79
SMC3-201ENST00000361804 TMC8Q8IU68 726 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 NPAS4Q8IUM7 802 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 OR7G3Q8NG95 312 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 SLC35A5Q9BS91 424 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 ACAT2Q9BWD1 397 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 SUV39H2Q9H5I1 410 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 CCNB1IP1Q9NPC3 277 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 EHD3Q9NZN3 535 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 ERVW-1Q9UQF0 538 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 PCDHGB6Q9Y5F9 930 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 PCDHGB3Q9Y5G1 929 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 PITPNM1O00562 1244 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 GPX5O75715 221 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 ZNF8P17098 575 aaPredicted RBP10.14□□□□□ -0.79
SMC3-201ENST00000361804 CNR2P34972 360 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 SPINT3P49223 89 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 SELENOWP63302 87 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 DEFB103AP81534 67 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 SRSF11Q05519 484 aaKnown RBP10.14□□□□□ -0.79
SMC3-201ENST00000361804 SSX1Q16384 188 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 RSBN1Q5VWQ0 802 aaPredicted RBP10.14□□□□□ -0.79
SMC3-201ENST00000361804 GAREM2Q75VX8 874 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 KIAA1958Q8N8K9 716 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 AQP11Q8NBQ7 271 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 OR8J2Q8NGG1 315 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 WDR36Q8NI36 951 aaKnown RBP10.14□□□□□ -0.79
SMC3-201ENST00000361804 TMEM203Q969S6 136 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 GABARAPL3Q9BY60 117 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 MMP27Q9H306 513 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 CTPS2Q9NRF8 586 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 MUTYHQ9UIF7 546 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 AGAP14A8MT82 685 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 GFYI3L273 518 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 ARHGAP33O14559 1287 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 METAP1P53582 386 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 ATN1P54259 1190 aaPredicted RBP10.14□□□□□ -0.79
SMC3-201ENST00000361804 LRRC74AQ0VAA2 488 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 ARMCX6Q7L4S7 300 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 ANKRD33Q7Z3H0 272 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 NRARPQ7Z6K4 114 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 CYB5D2Q8WUJ1 264 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 RIOK2Q9BVS4 552 aaKnown RBP10.14□□□□□ -0.79
SMC3-201ENST00000361804 STOX2Q9P2F5 926 aaPredicted RBP10.14□□□□□ -0.79
SMC3-201ENST00000361804 HSPE1-MOB4S4R3N1 261 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 A0A1W2PRU2 124 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 ZW10O43264 779 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 GABRB1P18505 474 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 CYP2A7P20853 494 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 S100A5P33763 92 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 DAB2P98082 770 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 SCARB2Q14108 478 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 TBCEQ15813 527 aaPredicted RBP10.14□□□□□ -0.79
SMC3-201ENST00000361804 USP43Q70EL4 1123 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 ABI3BPQ7Z7G0 1075 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 IQCF1Q8N6M8 205 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 IPCEF1Q8WWN9 437 aaPredicted RBP10.14□□□□□ -0.79
SMC3-201ENST00000361804 EPYCQ99645 322 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 PLAGL1Q9UM63 463 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 NOX1Q9Y5S8 564 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 HCFC2Q9Y5Z7 792 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 RTCAO00442 366 aaKnown RBP10.13□□□□□ -0.79
SMC3-201ENST00000361804 ASNA1O43681 348 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 NUAK1O60285 661 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 PQBP1O60828 265 aaKnown RBP10.13□□□□□ -0.79
SMC3-201ENST00000361804 SSTR4P31391 388 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 CCR2P41597 374 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 PRIM2P49643 509 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 STARD3Q14849 445 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 BCL2A1Q16548 175 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 GGTA1PQ4G0N0 100 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 C11orf65Q8NCR3 313 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 GPR151Q8TDV0 419 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 RAB8BQ92930 207 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 MGLLQ99685 303 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 BARHL1Q9BZE3 327 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 TIGARQ9NQ88 270 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 PLSCR3Q9NRY6 295 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 SPATA6Q9NWH7 488 aaPredicted RBP10.13□□□□□ -0.79
SMC3-201ENST00000361804 FAM120CQ9NX05 1096 aaKnown RBP10.13□□□□□ -0.79
SMC3-201ENST00000361804 PCDHGA3Q9Y5H0 932 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 TRBV4-1A0A0J9YWV2 114 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 SEMA7AO75326 666 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 CCNKO75909 580 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 MFN2O95140 757 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 NTN1O95631 604 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 RECKO95980 971 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 RPLP2P05387 115 aaKnown RBP10.13□□□□□ -0.79
SMC3-201ENST00000361804 IMPA1P29218 277 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 CCDC92Q53HC0 331 aaPredicted RBP10.13□□□□□ -0.79
SMC3-201ENST00000361804 TNFAIP8L2Q6P589 184 aaPredicted RBP10.13□□□□□ -0.79
SMC3-201ENST00000361804 USP45Q70EL2 814 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 TMEM25Q86YD3 366 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 LAX1Q8IWV1 398 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 OR4C15Q8NGM1 316 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 IGSF21Q96ID5 467 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 NUAK2Q9H093 628 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 MMP28Q9H239 520 aa10.13□□□□□ -0.79
SMC3-201ENST00000361804 TMED5Q9Y3A6 229 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms