RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 SNX7Q9UNH6 387 aa15.73■□□□□ 0.11
SCAF1-201ENST00000360565 ING4Q9UNL4 249 aa15.73■□□□□ 0.11
SCAF1-201ENST00000360565 USP22Q9UPT9 525 aa15.73■□□□□ 0.11
SCAF1-201ENST00000360565 TMA7Q9Y2S6 64 aaKnown RBP15.73■□□□□ 0.11
SCAF1-201ENST00000360565 SMIM30A4D0T7 59 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 KMOO15229 486 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 RETP07949 1114 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 HOXC13P31276 330 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 PGFP49763 221 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 SMSP52788 366 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 FADDQ13158 208 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 TEX26Q8N6G2 289 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 MFSD2AQ8NA29 543 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 OR4E2Q8NGC2 313 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 PRSS21Q9Y6M0 314 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 A0A1B0GVG6 124 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 DAPL1A0PJW8 107 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 ARHGEF33A8MVX0 844 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 ACOT8O14734 319 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 SDC1P18827 310 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 TNFRSF1BP20333 461 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 CD9P21926 228 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 CTSOP43234 321 aaPredicted RBP15.72■□□□□ 0.11
SCAF1-201ENST00000360565 CTSL3PQ5NE16 218 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 CASD1Q96PB1 797 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 F2RL3Q96RI0 385 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 LHPPQ9H008 270 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 KCNN2Q9H2S1 579 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 C11orf49Q9H6J7 331 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 TMEM138Q9NPI0 162 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 HEBP1Q9NRV9 189 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 ARNTLO00327 626 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 CLDN4O14493 209 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 ADAMTS4O75173 837 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 STSP08842 583 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 FSHRP23945 695 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 FUNDC1Q8IVP5 155 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 MFSD6LQ8IWD5 586 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 TCEAL8Q8IYN2 117 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 CBARPQ8N350 705 aaPredicted RBP15.72■□□□□ 0.11
SCAF1-201ENST00000360565 TMEM102Q8N9M5 508 aaPredicted RBP15.72■□□□□ 0.11
SCAF1-201ENST00000360565 ZNF675Q8TD23 568 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 ZNF296Q8WUU4 475 aaPredicted RBP15.72■□□□□ 0.11
SCAF1-201ENST00000360565 LRIG1Q96JA1 1093 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 CLSTN3Q9BQT9 956 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 LINC00597Q9H2U6 94 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 PAK1IP1Q9NWT1 392 aaPredicted RBP15.72■□□□□ 0.11
SCAF1-201ENST00000360565 PHIPQ8WWQ0 1821 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 GMFGO60234 142 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 GSTM3P21266 225 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 GSTM2P28161 218 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 ARRB2P32121 409 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 C10orf62Q5T681 223 aaPredicted RBP15.72■□□□□ 0.11
SCAF1-201ENST00000360565 SLC8B1Q6J4K2 584 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 FAM180BQ6P0A1 224 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 CARM1Q86X55 608 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 MINDY2Q8NBR6 621 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 GPR78Q96P69 363 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 ACPTQ9BZG2 426 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 SP140LQ9H930 580 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 TAS2R7Q9NYW3 318 aa15.72■□□□□ 0.11
SCAF1-201ENST00000360565 GPC6Q9Y625 555 aaPredicted RBP15.72■□□□□ 0.11
SCAF1-201ENST00000360565 HMGN1P05114 100 aa15.71■□□□□ 0.11
SCAF1-201ENST00000360565 OR2B6P58173 313 aa15.71■□□□□ 0.11
SCAF1-201ENST00000360565 FPGSQ05932 587 aa15.71■□□□□ 0.11
SCAF1-201ENST00000360565 CLCA4Q14CN2 919 aa15.71■□□□□ 0.11
SCAF1-201ENST00000360565 HMGN2P46Q86SG4 172 aa15.71■□□□□ 0.11
SCAF1-201ENST00000360565 CHERPQ8IWX8 916 aaKnown RBP15.71■□□□□ 0.11
SCAF1-201ENST00000360565 OR7G3Q8NG95 312 aa15.71■□□□□ 0.11
SCAF1-201ENST00000360565 PXYLP1Q8TE99 480 aa15.71■□□□□ 0.11
SCAF1-201ENST00000360565 SESN1Q9Y6P5 492 aa15.71■□□□□ 0.11
SCAF1-201ENST00000360565 E2F3O00716 465 aa15.71■□□□□ 0.11
SCAF1-201ENST00000360565 KHDRBS3O75525 346 aaKnown RBP15.71■□□□□ 0.11
SCAF1-201ENST00000360565 DNAJB5O75953 348 aa15.71■□□□□ 0.11
SCAF1-201ENST00000360565 KLKB1P03952 638 aa15.71■□□□□ 0.11
SCAF1-201ENST00000360565 RPL34P49207 117 aaKnown RBP15.71■□□□□ 0.11
SCAF1-201ENST00000360565 SLC13A2Q13183 592 aa15.71■□□□□ 0.11
SCAF1-201ENST00000360565 ERN2Q76MJ5 926 aaKnown RBP15.71■□□□□ 0.11
SCAF1-201ENST00000360565 CCDC116Q8IYX3 515 aa15.71■□□□□ 0.11
SCAF1-201ENST00000360565 SLC22A18Q96BI1 424 aa15.71■□□□□ 0.11
SCAF1-201ENST00000360565 TSSK6Q9BXA6 273 aa15.71■□□□□ 0.11
SCAF1-201ENST00000360565 HEBP2Q9Y5Z4 205 aa15.71■□□□□ 0.11
SCAF1-201ENST00000360565 EIF3FO00303 357 aaPredicted RBP15.71■□□□□ 0.1
SCAF1-201ENST00000360565 CDRT1O95170 752 aa15.71■□□□□ 0.1
SCAF1-201ENST00000360565 PTNP21246 168 aa15.71■□□□□ 0.1
SCAF1-201ENST00000360565 AGXTP21549 392 aa15.71■□□□□ 0.1
SCAF1-201ENST00000360565 MATN1P21941 496 aa15.71■□□□□ 0.1
SCAF1-201ENST00000360565 ALAS2P22557 587 aa15.71■□□□□ 0.1
SCAF1-201ENST00000360565 UQCRC2P22695 453 aa15.71■□□□□ 0.1
SCAF1-201ENST00000360565 TOR1AIP1Q5JTV8 583 aa15.71■□□□□ 0.1
SCAF1-201ENST00000360565 OAFQ86UD1 273 aa15.71■□□□□ 0.1
SCAF1-201ENST00000360565 C12orf76Q8N812 135 aaPredicted RBP15.71■□□□□ 0.1
SCAF1-201ENST00000360565 SIPA1Q96FS4 1042 aa15.71■□□□□ 0.1
SCAF1-201ENST00000360565 BARD1Q99728 777 aaKnown RBP15.71■□□□□ 0.1
SCAF1-201ENST00000360565 STOX2Q9P2F5 926 aaPredicted RBP15.71■□□□□ 0.1
SCAF1-201ENST00000360565 FBXL21Q9UKT6 434 aa15.71■□□□□ 0.1
SCAF1-201ENST00000360565 CKMT1AP12532 417 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 ZNF26P17031 533 aaPredicted RBP15.7■□□□□ 0.1
SCAF1-201ENST00000360565 CCR7P32248 378 aa15.7■□□□□ 0.1
SCAF1-201ENST00000360565 NTHL1P78549 312 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms