RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 CORO1AP31146 461 aaKnown RBP12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 IRF9Q00978 393 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 UBXN11Q5T124 520 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 PIGZQ86VD9 579 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 GTPBP8Q8N3Z3 284 aaPredicted RBP12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 DUSP26Q9BV47 211 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 Q9N2J8 555 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 ASB3Q9Y575 518 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 SVILO95425 2214 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 OR6C65A6NJZ3 312 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 H1F0P07305 194 aaKnown RBP12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 C2orf76Q3KRA6 126 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 FBXO15Q8NCQ5 510 aaPredicted RBP12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 SLC41A3Q96GZ6 507 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 OR2M4Q96R27 311 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 DPYSL5Q9BPU6 564 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 FER1L6Q2WGJ9 1857 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 NCBP2P52298 156 aaKnown RBP eCLIP12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 HERVK_113P63132 956 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 GALEQ14376 348 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 MYLK3Q32MK0 819 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 CARD16Q5EG05 197 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 TMEM69Q5SWH9 247 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 C9orf57Q5W0N0 161 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 KANK2Q63ZY3 851 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 CHST9Q7L1S5 443 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 FAM124AQ86V42 546 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 OR56A1Q8NGH5 318 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 EFCAB11Q9BUY7 163 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 ERVK-6Q9BXR3 956 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 SDHAF2Q9NX18 166 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 TP53I11O14683 189 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 CAMLGP49069 296 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 GRIK2Q13002 908 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 ITPK1Q13572 414 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 BRAT1Q6PJG6 821 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 ZNF367Q7RTV3 350 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 TMEM139Q8IV31 216 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 PTTG1O95997 202 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 MAP2K4P45985 399 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 GTF2BQ00403 316 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 ODF4Q2M2E3 257 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 GID4Q8IVV7 300 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 BBS1Q8NFJ9 593 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 ACER1Q8TDN7 264 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 NUP205Q92621 2012 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 SLC35A5Q9BS91 424 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 DNAJC27Q9NZQ0 273 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 FZD4Q9ULV1 537 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 ICKQ9UPZ9 632 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 RBMXP38159 391 aaKnown RBP12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 AFF3P51826 1226 aaKnown RBP12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 ZNF169Q14929 603 aaPredicted RBP12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 LIPKQ5VXJ0 399 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 PAPD4Q6PIY7 484 aaKnown RBP12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 OR5T1Q8NG75 326 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 FAM237AA0A1B0GTK4 181 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 INSIG1O15503 277 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 BCAS2O75934 225 aaPredicted RBP12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 GP1BBP13224 206 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 C14orf28Q4W4Y0 310 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 CCDC71Q8IV32 467 aaPredicted RBP12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 CCDC32Q9BV29 185 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 PLEKHA3Q9HB20 300 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 ZBTB26Q9HCK0 441 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 FLRT2O43155 660 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 KLRC4O43908 158 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 OR1D2P34982 312 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 PTGIRP43119 386 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 NR4A2P43354 598 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 TARBP2Q15633 366 aaKnown RBP12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 NBPF12Q5TAG4 269 aaPredicted RBP12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 RAB39BQ96DA2 213 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 DNTTIP1Q9H147 329 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 ACTL8Q9H568 366 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 ERVK-18Q9QC07 812 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 MROH2AA6NES4 1674 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 CH25HO95992 272 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 ZBTB48P10074 688 aaPredicted RBP12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 TAL1P17542 331 aaPredicted RBP12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 THBS2P35442 1172 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 GALK2Q01415 458 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 RNF151Q2KHN1 245 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 BACE2Q9Y5Z0 518 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 VWDEQ8N2E2 1590 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 FFAR2O15552 330 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 MFSD11O43934 449 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 DIRAS3O95661 229 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 CDH11P55287 796 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 FRZBQ92765 325 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 ADAMTS10Q9H324 1103 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 LCHNA4D1U4 455 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 GRID2O43424 1007 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 GPX6P59796 221 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 PLD5Q8N7P1 536 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 OR14A2Q96R54 314 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 G6PC3Q9BUM1 346 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 HDHD5Q9BXW7 423 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 TCAF1Q9Y4C2 921 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 CLIC1O00299 241 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms