RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 GLUD1P00367 558 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 DLDP09622 509 aaKnown RBP9□□□□□ -0.97
VPS13A-203ENST00000360280 RAC2P15153 192 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 OXTRP30559 389 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 ZNF84P51523 738 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 EIF2B1Q14232 305 aaKnown RBP9□□□□□ -0.97
VPS13A-203ENST00000360280 SCML4Q8N228 414 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 PYROXD2Q8N2H3 581 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 CANT1Q8WVQ1 401 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 SLC29A3Q9BZD2 475 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 IL17RBQ9NRM6 502 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 TISP43B9A030 160 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 SMIM10L2AP0DMW4 78 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 SMIM10L2BP0DMW5 78 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 CHRNB2P17787 502 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 PLP2Q04941 152 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 CHST9Q7L1S5 443 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 ERMP1Q7Z2K6 904 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 TRMT61BQ9BVS5 477 aaKnown RBP9□□□□□ -0.97
VPS13A-203ENST00000360280 RHOP08100 348 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 CD6P30203 668 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 PRMT2P55345 433 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 PSPHP78330 225 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 PLGLB1Q02325 96 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 TRAM2Q15035 370 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 ZNF619Q8N2I2 560 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 MARVELD2Q8N4S9 558 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 FAIMQ9NVQ4 179 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 MYPNQ86TC9 1320 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 EPHX1P07099 455 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 CHRM1P11229 460 aaPredicted RBP9□□□□□ -0.97
VPS13A-203ENST00000360280 OR4K17Q8NGC6 315 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 DPCDQ9BVM2 203 aaPredicted RBP9□□□□□ -0.97
VPS13A-203ENST00000360280 ASF1BQ9NVP2 202 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 SLC27A5Q9Y2P5 690 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 UBE2J1Q9Y385 318 aaPredicted RBP9□□□□□ -0.97
VPS13A-203ENST00000360280 A0A0A6YYH2 397 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 A0A1W2PP18 115 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 A6NJ64 397 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 SLC27A4Q6P1M0 643 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 MYRFLQ96LU7 910 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 RAB9BQ9NP90 201 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9□□□□□ -0.97
VPS13A-203ENST00000360280 FCER2P06734 321 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 DNAJB1P25685 340 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 GLUD2P49448 558 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 TSTD2Q5T7W7 516 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 OR52B2Q96RD2 323 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 ABCB8Q9NUT2 735 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 RAB19A4D1S5 217 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 LIPKQ5VXJ0 399 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 KLHL13Q9P2N7 655 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 CD84Q9UIB8 345 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 HPRP00739 348 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 AGXTP21549 392 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 GABARAPL2P60520 117 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 CAPSQ13938 189 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 FBXO48Q5FWF7 155 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 ELP2Q6IA86 826 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 ITPKCQ96DU7 683 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 HNRNPABQ99729 332 aaKnown RBP8.99□□□□□ -0.97
VPS13A-203ENST00000360280 GHRLQ9UBU3 117 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 FAM237AA0A1B0GTK4 181 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 DFNA5O60443 496 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 CREG1O75629 220 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 SC5DO75845 299 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 PTPRAP18433 802 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 GABRR2P28476 465 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 OR5AK3PQ8NH89 298 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 CERKQ8TCT0 537 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 OR51I1Q9H343 314 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 FAM86C1Q9NVL1 165 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 PAK1IP1Q9NWT1 392 aaPredicted RBP8.99□□□□□ -0.97
VPS13A-203ENST00000360280 GPRC5BQ9NZH0 403 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 A0A1W2PPL8 197 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 M0R2N6 131 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 BRINP1O60477 761 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 RFPL2O75678 378 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 NFKBIDQ8NI38 313 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 RNF128Q8TEB7 428 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 LDAHQ9H6V9 325 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 CTPS2Q9NRF8 586 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 CCDC71Q8IV32 467 aaPredicted RBP8.99□□□□□ -0.97
VPS13A-203ENST00000360280 OR8K3Q8NH51 312 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 ARMC5Q96C12 935 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 PWWP2AQ96N64 755 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 SYT3Q9BQG1 590 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 GATA5Q9BWX5 397 aaPredicted RBP8.99□□□□□ -0.97
VPS13A-203ENST00000360280 RPF2Q9H7B2 306 aaKnown RBP8.99□□□□□ -0.97
VPS13A-203ENST00000360280 ZNF705GA8MUZ8 300 aaPredicted RBP8.99□□□□□ -0.97
VPS13A-203ENST00000360280 ACTR1BP42025 376 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 TAS2R31P59538 309 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 PGAP1Q75T13 922 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 S100A7AQ86SG5 101 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 PGAP3Q96FM1 320 aaPredicted RBP8.99□□□□□ -0.97
VPS13A-203ENST00000360280 FUNDC2Q9BWH2 189 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 AKTIPQ9H8T0 292 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 RPS10P5Q9NQ39 176 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 DNAJC27Q9NZQ0 273 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 STUB1Q9UNE7 303 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms