RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 C1orf146Q5VVC0 180 aa16.23■□□□□ 0.19
TPM1-205ENST00000357980 NANOGP8Q6NSW7 305 aa16.23■□□□□ 0.19
TPM1-205ENST00000357980 TRIM40Q6P9F5 258 aa16.23■□□□□ 0.19
TPM1-205ENST00000357980 R3HCC1LQ7Z5L2 792 aaKnown RBP16.23■□□□□ 0.19
TPM1-205ENST00000357980 ANKRD46Q86W74 232 aa16.23■□□□□ 0.19
TPM1-205ENST00000357980 MSRB3Q8IXL7 192 aa16.23■□□□□ 0.19
TPM1-205ENST00000357980 MMP21Q8N119 569 aa16.23■□□□□ 0.19
TPM1-205ENST00000357980 DNAJB8Q8NHS0 232 aa16.23■□□□□ 0.19
TPM1-205ENST00000357980 DNAJB14Q8TBM8 379 aa16.23■□□□□ 0.19
TPM1-205ENST00000357980 MTERF3Q96E29 417 aa16.23■□□□□ 0.19
TPM1-205ENST00000357980 ITCHQ96J02 903 aa16.23■□□□□ 0.19
TPM1-205ENST00000357980 PRPF18Q99633 342 aaKnown RBP16.23■□□□□ 0.19
TPM1-205ENST00000357980 TBCDQ9BTW9 1192 aa16.23■□□□□ 0.19
TPM1-205ENST00000357980 DUSP26Q9BV47 211 aa16.23■□□□□ 0.19
TPM1-205ENST00000357980 TRIM8Q9BZR9 551 aa16.23■□□□□ 0.19
TPM1-205ENST00000357980 KCNH6Q9H252 994 aa16.23■□□□□ 0.19
TPM1-205ENST00000357980 NANOGQ9H9S0 305 aa16.23■□□□□ 0.19
TPM1-205ENST00000357980 FAM60AQ9NP50 221 aa16.23■□□□□ 0.19
TPM1-205ENST00000357980 SLC6A13Q9NSD5 602 aa16.23■□□□□ 0.19
TPM1-205ENST00000357980 SLC25A37Q9NYZ2 338 aa16.23■□□□□ 0.19
TPM1-205ENST00000357980 SLC6A14Q9UN76 642 aa16.23■□□□□ 0.19
TPM1-205ENST00000357980 RP1P56715 2156 aa16.23■□□□□ 0.19
TPM1-205ENST00000357980 NUP214P35658 2090 aaPredicted RBP16.22■□□□□ 0.19
TPM1-205ENST00000357980 A0A096LPI6 279 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 C15orf38-AP3S2A0A0A6YYH1 394 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 SLC9B1P1A6NJY1 282 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 HCRTR1O43613 425 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 ERN1O75460 977 aaKnown RBP16.22■□□□□ 0.19
TPM1-205ENST00000357980 SCELO95171 688 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 MYF5P13349 255 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 ME2P23368 584 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 ATP5A1P25705 553 aaKnown RBP16.22■□□□□ 0.19
TPM1-205ENST00000357980 RPL3P39023 403 aaKnown RBP16.22■□□□□ 0.19
TPM1-205ENST00000357980 OR1D5P58170 312 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 ACTR3P61158 418 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 TRA2BP62995 288 aaKnown RBP16.22■□□□□ 0.19
TPM1-205ENST00000357980 SNRPNP63162 240 aaKnown RBP16.22■□□□□ 0.19
TPM1-205ENST00000357980 LPAL2Q16609 132 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 RABL3Q5HYI8 236 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 NKAIN2Q5VXU1 208 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 MRM1Q6IN84 353 aaKnown RBP16.22■□□□□ 0.19
TPM1-205ENST00000357980 FAM92BQ6ZTR7 304 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 DGLUCYQ7Z3D6 616 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 ARPINQ7Z6K5 226 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 ZCCHC7Q8N3Z6 543 aaKnown RBP16.22■□□□□ 0.19
TPM1-205ENST00000357980 INPP5KQ9BT40 448 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 BHLHE41Q9C0J9 482 aaPredicted RBP16.22■□□□□ 0.19
TPM1-205ENST00000357980 EPB41L1Q9H4G0 881 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 PADI4Q9UM07 663 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 LY6G6EA0A0G2JKS1 128 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 TLCD2A6NGC4 264 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 ARHGAP33O14559 1287 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 KIF1CO43896 1103 aaKnown RBP16.22■□□□□ 0.19
TPM1-205ENST00000357980 SMIM10L1P0DMW3 83 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 CCT8P50990 548 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 DNAJC14Q6Y2X3 702 aaPredicted RBP16.22■□□□□ 0.19
TPM1-205ENST00000357980 ACOT4Q8N9L9 421 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 CAMKVQ8NCB2 501 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 FAM156AQ8NDB6 213 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 OR8K5Q8NH50 307 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 UTP15Q8TED0 518 aaKnown RBP16.22■□□□□ 0.19
TPM1-205ENST00000357980 RERGQ96A58 199 aaPredicted RBP16.22■□□□□ 0.19
TPM1-205ENST00000357980 MIEF2Q96C03 454 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 SMIM10Q96HG1 83 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 CCDC115Q96NT0 180 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 ANKRD27Q96NW4 1050 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 TGM7Q96PF1 710 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 SH3BP4Q9P0V3 963 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 SUCOQ9UBS9 1254 aaKnown RBP16.22■□□□□ 0.19
TPM1-205ENST00000357980 ERVK-11Q9UQG0 969 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 U3KQA8 63 aa16.22■□□□□ 0.19
TPM1-205ENST00000357980 WDR87Q6ZQQ6 2873 aa16.21■□□□□ 0.19
TPM1-205ENST00000357980 SCN3AQ9NY46 2000 aa16.21■□□□□ 0.19
TPM1-205ENST00000357980 PRSS51A0A1B0GVH4 220 aa16.21■□□□□ 0.19
TPM1-205ENST00000357980 B4GAT1O43505 415 aa16.21■□□□□ 0.19
TPM1-205ENST00000357980 FAM58BPP0C7Q3 252 aa16.21■□□□□ 0.19
TPM1-205ENST00000357980 ZNF888P0CJ79 500 aaPredicted RBP16.21■□□□□ 0.19
TPM1-205ENST00000357980 ALPPL2P10696 532 aa16.21■□□□□ 0.19
TPM1-205ENST00000357980 HSD17B1P14061 328 aa16.21■□□□□ 0.19
TPM1-205ENST00000357980 DDCP20711 480 aa16.21■□□□□ 0.19
TPM1-205ENST00000357980 MSX2P35548 267 aaPredicted RBP16.21■□□□□ 0.19
TPM1-205ENST00000357980 CDKN2CP42773 168 aa16.21■□□□□ 0.19
TPM1-205ENST00000357980 RAB8AP61006 207 aa16.21■□□□□ 0.19
TPM1-205ENST00000357980 GPLD1P80108 840 aa16.21■□□□□ 0.19
TPM1-205ENST00000357980 TGM3Q08188 693 aa16.21■□□□□ 0.19
TPM1-205ENST00000357980 PRSS53Q2L4Q9 553 aa16.21■□□□□ 0.19
TPM1-205ENST00000357980 MPEG1Q2M385 716 aa16.21■□□□□ 0.19
TPM1-205ENST00000357980 MUM1Q2TAK8 710 aa16.21■□□□□ 0.19
TPM1-205ENST00000357980 SPATS1Q496A3 300 aa16.21■□□□□ 0.19
TPM1-205ENST00000357980 MANEAQ5SRI9 462 aa16.21■□□□□ 0.19
TPM1-205ENST00000357980 FAM181AQ8N9Y4 354 aa16.21■□□□□ 0.19
TPM1-205ENST00000357980 OR8J3Q8NGG0 315 aa16.21■□□□□ 0.19
TPM1-205ENST00000357980 OR2I1PQ8NGU4 316 aa16.21■□□□□ 0.19
TPM1-205ENST00000357980 NCSTNQ92542 709 aa16.21■□□□□ 0.19
TPM1-205ENST00000357980 PPCDCQ96CD2 204 aa16.21■□□□□ 0.19
TPM1-205ENST00000357980 ZNF764Q96H86 408 aaPredicted RBP16.21■□□□□ 0.19
TPM1-205ENST00000357980 CD180Q99467 661 aa16.21■□□□□ 0.19
TPM1-205ENST00000357980 C11orf16Q9NQ32 467 aa16.21■□□□□ 0.19
TPM1-205ENST00000357980 ATAD3AQ9NVI7 634 aa16.21■□□□□ 0.19
TPM1-205ENST00000357980 TEX10Q9NXF1 929 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms