RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 SUCOQ9UBS9 1254 aaKnown RBP8.76□□□□□ -1.01
UPF2-202ENST00000357604 C2orf16Q68DN1 1984 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 RFPL1O75677 317 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 C9P02748 559 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 FAM58BPP0C7Q3 252 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 ARNTP27540 789 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 KIR3DL1P43629 444 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 ERVK-8P63133 956 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 CBLBQ13191 982 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 EFR3AQ14156 821 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 KANK2Q63ZY3 851 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 CENPLQ8N0S6 344 aaPredicted RBP8.76□□□□□ -1.01
UPF2-202ENST00000357604 HUS1BQ8NHY5 278 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 NAT14Q8WUY8 206 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 NEIL2Q969S2 332 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 G6PC3Q9BUM1 346 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 EFCAB1Q9HAE3 211 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 SLC22A2O15244 555 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 PRAMEF2O60811 474 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 NSA2O95478 260 aaKnown RBP8.76□□□□□ -1.01
UPF2-202ENST00000357604 NUDT14O95848 222 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 PDYNP01213 254 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 ALDOAP04075 364 aaKnown RBP8.76□□□□□ -1.01
UPF2-202ENST00000357604 XCR1P46094 333 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 TPD52P55327 224 aaPredicted RBP8.76□□□□□ -1.01
UPF2-202ENST00000357604 DNAL1Q4LDG9 190 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 RNF44Q7L0R7 432 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 ZFAND4Q86XD8 727 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 LRRC34Q8IZ02 419 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 ZNF614Q8N883 585 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 FAM120BQ96EK7 910 aaKnown RBP8.76□□□□□ -1.01
UPF2-202ENST00000357604 ZNF607Q96SK3 696 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 SGPP1Q9BX95 441 aa8.76□□□□□ -1.01
UPF2-202ENST00000357604 A0A0A6YYC8 382 aaPredicted RBP8.75□□□□□ -1.01
UPF2-202ENST00000357604 A8MUA0 341 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 E7ENX8 843 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 I3L1I5 382 aaPredicted RBP8.75□□□□□ -1.01
UPF2-202ENST00000357604 SGK494L7N484 410 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 SAP18O00422 153 aaKnown RBP8.75□□□□□ -1.01
UPF2-202ENST00000357604 PIP5K1BO14986 540 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 ALOX12BO75342 701 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 PIAS1O75925 651 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 SCTRP47872 440 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 TAP2Q03519 686 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 GPAT3Q53EU6 434 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 ADGRF3Q8IZF5 1079 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 TMCO5AQ8N6Q1 288 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 ACTRT2Q8TDY3 377 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 SLC35G5Q96KT7 338 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 SPIN1Q9Y657 262 aaPredicted RBP8.75□□□□□ -1.01
UPF2-202ENST00000357604 SLC22A7Q9Y694 548 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 AK1P00568 194 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 NTRK1P04629 796 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 RPS17P08708 135 aaKnown RBP8.75□□□□□ -1.01
UPF2-202ENST00000357604 IL1RL1Q01638 556 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 EEF1A2Q05639 463 aaKnown RBP8.75□□□□□ -1.01
UPF2-202ENST00000357604 BST1Q10588 318 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 FAM53BQ14153 422 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 SSPNQ14714 243 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 EIPR1Q53HC9 387 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 ZNF621Q6ZSS3 439 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 NDUFAF7Q7L592 441 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 GALNT12Q8IXK2 581 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 FAM47BQ8NA70 645 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 THAP4Q8WY91 577 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 TBC1D20Q96BZ9 403 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 NUDT22Q9BRQ3 303 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 THUMPD3Q9BV44 507 aaKnown RBP8.75□□□□□ -1.01
UPF2-202ENST00000357604 GATA5Q9BWX5 397 aaPredicted RBP8.75□□□□□ -1.01
UPF2-202ENST00000357604 EBF2Q9HAK2 575 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 TAS2R9Q9NYW1 312 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 C6orf203Q9P0P8 240 aaPredicted RBP8.75□□□□□ -1.01
UPF2-202ENST00000357604 OR6C76A6NM76 312 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 RDH16O75452 317 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 SOD1P00441 154 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 ALBP02768 609 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 P04436 131 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 F7P08709 466 aaPredicted RBP8.75□□□□□ -1.01
UPF2-202ENST00000357604 HOXB6P17509 224 aaKnown RBP8.75□□□□□ -1.01
UPF2-202ENST00000357604 PSMB5P28074 263 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 SHC2P98077 582 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 NKAIN1Q4KMZ8 207 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 SYVN1Q86TM6 617 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 BCAS4Q8TDM0 211 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 EBPLQ9BY08 206 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 OR51B5Q9H339 312 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 ADA2Q9NZK5 511 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 DKKL1Q9UK85 242 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 TIMM22Q9Y584 194 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 A8MUI8 341 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 GAPDHSO14556 408 aaPredicted RBP8.75□□□□□ -1.01
UPF2-202ENST00000357604 CLCN2P51788 898 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 GFERP55789 205 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 CSNK1G2P78368 415 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 SNTA1Q13424 505 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 SPPL2AQ8TCT8 520 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 TXLNGYQ9BZA5 131 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 METTL7AQ9H8H3 244 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 GALPQ9UBC7 116 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 PCDHGA7Q9Y5G6 932 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms