RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 EIPR1Q53HC9 387 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 CTSL3PQ5NE16 218 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 MEAF6Q9HAF1 191 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 MKS1Q9NXB0 559 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 AQP12BA6NM10 295 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 CACNG3O60359 315 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 MTTPP55157 894 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 BNC1Q01954 994 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 SHISA6Q6ZSJ9 500 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 COMMD6Q7Z4G1 85 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 NRROSQ86YC3 692 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 AQP12AQ8IXF9 295 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 ZNF433Q8N7K0 673 aaPredicted RBP13.16□□□□□ -0.3
SMC6-201ENST00000351948 OR10H4Q8NGA5 316 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 GPR150Q8NGU9 434 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 LKAAEAR1Q8TD35 194 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 MRPS26Q9BYN8 205 aaKnown RBP13.16□□□□□ -0.3
SMC6-201ENST00000351948 RDH14Q9HBH5 336 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 TAS2R9Q9NYW1 312 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 SCML1Q9UN30 329 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 IQCMA0A1B0GVH7 501 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 RGS10O43665 173 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 APBB3O95704 486 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 PROS1P07225 676 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 PAX7P23759 505 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 CXCR1P25024 350 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 CTHP32929 405 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 SGCBQ16585 318 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 KDM1BQ8NB78 822 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 SNX33Q8WV41 574 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 PEX12O00623 359 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 GCAP28676 217 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 GABRA3P34903 492 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 COX10Q12887 443 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 DECR1Q16698 335 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 RTL10Q7L3V2 364 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 CLIP4Q8N3C7 705 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 MYADMQ96S97 322 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 CCDC106Q9BWC9 280 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 FBRSQ9HAH7 460 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 AIG1Q9NVV5 245 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 PCDHGA2Q9Y5H1 932 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 NUDT6P53370 316 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 GTDC1Q4AE62 458 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 LILRA3Q8N6C8 439 aaPredicted RBP13.15□□□□□ -0.3
SMC6-201ENST00000351948 OR7G3Q8NG95 312 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 OR56A1Q8NGH5 318 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 NELL2Q99435 816 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 GSTO2Q9H4Y5 243 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 METTL7AQ9H8H3 244 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 LINGO3P0C6S8 592 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 LAMP1P11279 417 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 RPS3P23396 243 aaKnown RBP eCLIP13.15□□□□□ -0.3
SMC6-201ENST00000351948 TRAP1Q12931 704 aaKnown RBP13.15□□□□□ -0.3
SMC6-201ENST00000351948 CDKN3Q16667 212 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 CYBRD1Q53TN4 286 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 KCTD11Q693B1 232 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 OR2T5Q6IEZ7 315 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 OR2T29Q8NH02 315 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 OR5K1Q8NHB7 308 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 SLC30A3Q99726 388 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 RPF2Q9H7B2 306 aaKnown RBP13.15□□□□□ -0.3
SMC6-201ENST00000351948 ANKMY1Q9P2S6 941 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 DAPK2Q9UIK4 370 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 DMTF1Q9Y222 760 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 ANKRD31Q8N7Z5 1873 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 PRSS38A1L453 326 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 PRRT4C9JH25 899 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 COQ9O75208 318 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 H1F0P07305 194 aaKnown RBP13.15□□□□□ -0.3
SMC6-201ENST00000351948 DUSP6Q16828 381 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 FAM180AQ6UWF9 173 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 UNC5DQ6UXZ4 953 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 OR52E1Q8NGJ3 308 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 GEMIN6Q8WXD5 167 aaKnown RBP13.15□□□□□ -0.3
SMC6-201ENST00000351948 MKKSQ9NPJ1 570 aaPredicted RBP13.15□□□□□ -0.3
SMC6-201ENST00000351948 COMMD3-BMI1R4GMX3 469 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 LY75O60449 1722 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 CLIC3O95833 236 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 CD6P30203 668 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 GSTT1P30711 240 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 CCSAPQ6IQ19 270 aaPredicted RBP13.15□□□□□ -0.3
SMC6-201ENST00000351948 KCNK12Q9HB15 430 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 EMCNQ9ULC0 261 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 ZNF451Q9Y4E5 1061 aa13.15□□□□□ -0.3
SMC6-201ENST00000351948 PCSK2P16519 638 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 ETV4P43268 484 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 ABATP80404 500 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 DENND5AQ6IQ26 1287 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 ZNF347Q96SE7 839 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 TMEM168Q9H0V1 697 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 BRD7Q9NPI1 651 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 ACTR3BQ9P1U1 418 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 FIGNL1Q6PIW4 674 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 FRRS1Q6ZNA5 592 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 GJD3Q8N144 294 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 SVOPLQ8N434 492 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 EHD1Q9H4M9 534 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 SSR3Q9UNL2 185 aa13.14□□□□□ -0.31
SMC6-201ENST00000351948 SCO2O43819 266 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms