RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 CHRM5P08912 532 aaPredicted RBP6.6□□□□□ -1.35
TRIM55-203ENST00000350034 LINGO3P0C6S8 592 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 FAM58BPP0C7Q3 252 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 EFNA1P20827 205 aaPredicted RBP6.6□□□□□ -1.35
TRIM55-203ENST00000350034 AK4P27144 223 aaPredicted RBP6.6□□□□□ -1.35
TRIM55-203ENST00000350034 KDELR2P33947 212 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 PCGF2P35227 344 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 AHRP35869 848 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 NUDT1P36639 197 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 BCL6P41182 706 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 SLC19A1P41440 591 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 DGKEP52429 567 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 CRYBA2P53672 197 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 MAPK12P53778 367 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 SRP54P61011 504 aaKnown RBP6.6□□□□□ -1.35
TRIM55-203ENST00000350034 HBA1P69905 142 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 CYP4F2P78329 520 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 EEF1A2Q05639 463 aaKnown RBP6.6□□□□□ -1.35
TRIM55-203ENST00000350034 RBBP4Q09028 425 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 HYAL2Q12891 473 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 TDGQ13569 410 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 GK3PQ14409 553 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 KRT33BQ14525 404 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 MYBPC3Q14896 1274 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 C16orf72Q14CZ0 275 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 SMAD2Q15796 467 aaKnown RBP6.6□□□□□ -1.35
TRIM55-203ENST00000350034 SLC36A3Q495N2 470 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 IQCCQ4KMZ1 466 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 CCNYL2Q5T2Q4 361 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 MRM1Q6IN84 353 aaKnown RBP6.6□□□□□ -1.35
TRIM55-203ENST00000350034 ZCCHC8Q6NZY4 707 aaKnown RBP6.6□□□□□ -1.35
TRIM55-203ENST00000350034 TBPL2Q6SJ96 375 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 Q6ZS52 159 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 Q6ZSR6 202 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 USP51Q70EK9 711 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 CBLL1Q75N03 491 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 EIF3MQ7L2H7 374 aaKnown RBP6.6□□□□□ -1.35
TRIM55-203ENST00000350034 SYT13Q7L8C5 426 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 PAGE2Q7Z2X7 111 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 PAQR7Q86WK9 346 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 MMP21Q8N119 569 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 FBXL6Q8N531 539 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 MFSD9Q8NBP5 474 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 OR52N2Q8NGI0 321 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 OR4A15Q8NGL6 344 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 CCL4L1Q8NHW4 92 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 CDC26Q8NHZ8 85 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 FBXO30Q8TB52 745 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 GPBAR1Q8TDU6 330 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 HMGB4Q8WW32 186 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 ZFPM2Q8WW38 1151 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 OR5P2Q8WZ92 322 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 SNX19Q92543 992 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 TSACCQ96A04 125 aaPredicted RBP6.6□□□□□ -1.35
TRIM55-203ENST00000350034 RGMAQ96B86 450 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 SLC47A1Q96FL8 570 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 CNTNAP3BQ96NU0 1288 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 ORAI3Q9BRQ5 295 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 CNTNAP3Q9BZ76 1288 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 SLC6A16Q9GZN6 736 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 POLMQ9NP87 494 aaPredicted RBP6.6□□□□□ -1.35
TRIM55-203ENST00000350034 MRPS30Q9NP92 439 aaKnown RBP6.6□□□□□ -1.35
TRIM55-203ENST00000350034 C1GALT1Q9NS00 363 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 SPHK1Q9NYA1 384 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 USE1Q9NZ43 259 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 TAAR2Q9P1P5 351 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 MOSPD1Q9UJG1 213 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 PADI4Q9UM07 663 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 PCDHGB4Q9UN71 923 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 SNX7Q9UNH6 387 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 SAMD4AQ9UPU9 718 aaKnown RBP6.6□□□□□ -1.35
TRIM55-203ENST00000350034 DMTF1Q9Y222 760 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 PCDHGB5Q9Y5G0 923 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 V9GYQ6 96 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 CHD9Q3L8U1 2897 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 FAM208BQ5VWN6 2430 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 RNF103-CHMP3A0A140T963 221 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 A0A1W2PRB8 838 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 OR2A25A4D2G3 310 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 TRIM64A6NGJ6 449 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 PRR33A8MZF0 331 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 H0YAE9 185 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 RTCAO00442 366 aaKnown RBP6.59□□□□□ -1.35
TRIM55-203ENST00000350034 BTN3A3O00478 584 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 HAT1O14929 419 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 SCAMP1O15126 338 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 TNFSF14O43557 240 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 HPRP00739 348 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 MT-ND1P03886 318 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 NUDT7P0C024 238 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 F3P13726 295 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 DRD2P14416 443 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 DDX5P17844 614 aaKnown RBP6.59□□□□□ -1.35
TRIM55-203ENST00000350034 CD72P21854 359 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 UQCRC2P22695 453 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 MYF6P23409 242 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 CMPK1P30085 196 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 ACTR1BP42025 376 aa6.59□□□□□ -1.35
TRIM55-203ENST00000350034 RPS9P46781 194 aaKnown RBP6.59□□□□□ -1.35
TRIM55-203ENST00000350034 RABIFP47224 123 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms