RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 ERI3O43414 337 aaKnown RBP12.47□□□□□ -0.41
CLCC1-202ENST00000348264 CCNT2O60583 730 aaKnown RBP12.47□□□□□ -0.41
CLCC1-202ENST00000348264 PRMT3O60678 531 aa12.47□□□□□ -0.41
CLCC1-202ENST00000348264 H2AFYO75367 372 aaKnown RBP12.47□□□□□ -0.41
CLCC1-202ENST00000348264 URI1O94763 535 aaPredicted RBP12.47□□□□□ -0.41
CLCC1-202ENST00000348264 EDN3P14138 238 aa12.47□□□□□ -0.41
CLCC1-202ENST00000348264 TDGF1P3P51864 188 aa12.47□□□□□ -0.41
CLCC1-202ENST00000348264 STXBP1P61764 594 aaKnown RBP12.47□□□□□ -0.41
CLCC1-202ENST00000348264 BTN3A2P78410 334 aa12.47□□□□□ -0.41
CLCC1-202ENST00000348264 IRF9Q00978 393 aa12.47□□□□□ -0.41
CLCC1-202ENST00000348264 SRSF11Q05519 484 aaKnown RBP12.47□□□□□ -0.41
CLCC1-202ENST00000348264 BMPR2Q13873 1038 aa12.47□□□□□ -0.41
CLCC1-202ENST00000348264 DOC2AQ14183 400 aa12.47□□□□□ -0.41
CLCC1-202ENST00000348264 ADPRMQ3LIE5 342 aa12.47□□□□□ -0.41
CLCC1-202ENST00000348264 XKR6Q5GH73 641 aa12.47□□□□□ -0.41
CLCC1-202ENST00000348264 RAPH1Q70E73 1250 aa12.47□□□□□ -0.41
CLCC1-202ENST00000348264 ISCA2Q86U28 154 aa12.47□□□□□ -0.41
CLCC1-202ENST00000348264 CENPLQ8N0S6 344 aaPredicted RBP12.47□□□□□ -0.41
CLCC1-202ENST00000348264 KIF2BQ8N4N8 673 aa12.47□□□□□ -0.41
CLCC1-202ENST00000348264 MRRFQ96E11 262 aaKnown RBP12.47□□□□□ -0.41
CLCC1-202ENST00000348264 WDR34Q96EX3 536 aa12.47□□□□□ -0.41
CLCC1-202ENST00000348264 ATOH8Q96SQ7 321 aa12.47□□□□□ -0.41
CLCC1-202ENST00000348264 CAPS2Q9BXY5 557 aa12.47□□□□□ -0.41
CLCC1-202ENST00000348264 NT5DC2Q9H857 520 aa12.47□□□□□ -0.41
CLCC1-202ENST00000348264 CLK4Q9HAZ1 481 aaKnown RBP12.47□□□□□ -0.41
CLCC1-202ENST00000348264 NECTIN3Q9NQS3 549 aa12.47□□□□□ -0.41
CLCC1-202ENST00000348264 NUDT4Q9NZJ9 180 aa12.47□□□□□ -0.41
CLCC1-202ENST00000348264 SLC5A6Q9Y289 635 aa12.47□□□□□ -0.41
CLCC1-202ENST00000348264 CACNA1DQ01668 2161 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 TCRBV16S1A1N1A0A5B0 115 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 HMX2A2RU54 273 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 WIPF3A6NGB9 483 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 SUPT3HB4E1H0 165 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 TGFBR3LH3BV60 316 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 PRAMEF2O60811 474 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 KERAO60938 352 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 SUPT3HO75486 399 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 CLEC3AO75596 197 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 DDAH2O95865 285 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 S100BP04271 92 aaPredicted RBP12.46□□□□□ -0.41
CLCC1-202ENST00000348264 LTA4HP09960 611 aaKnown RBP12.46□□□□□ -0.41
CLCC1-202ENST00000348264 GSTM2P28161 218 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 CRABP2P29373 138 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 HNRNPFP52597 415 aaKnown RBP12.46□□□□□ -0.41
CLCC1-202ENST00000348264 PMP22Q01453 160 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 TUBA3CQ13748 450 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 RUNX2Q13950 521 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 WHAMMP3Q1A5X7 153 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 TUBA3EQ6PEY2 450 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 LRRC70Q7Z2Q7 622 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 TBC1D1Q86TI0 1168 aaPredicted RBP12.46□□□□□ -0.41
CLCC1-202ENST00000348264 CYP4X1Q8N118 509 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 MDS2Q8NDY4 140 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 TMEM52Q8NDY8 209 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 STAG3L4Q8TBR4 150 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 ELP5Q8TE02 316 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 UBTD2Q8WUN7 234 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 KCTD4Q8WVF5 259 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 NR4A3Q92570 626 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 NXNL1Q96CM4 212 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 PTCD3Q96EY7 689 aaKnown RBP12.46□□□□□ -0.41
CLCC1-202ENST00000348264 SEC16BQ96JE7 1060 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 FAR2Q96K12 515 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 ZNF354BQ96LW1 612 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 C5orf34Q96MH7 638 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 QRFPRQ96P65 431 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 SIGLEC12Q96PQ1 595 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 EFCAB11Q9BUY7 163 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 PITHD1Q9GZP4 211 aaPredicted RBP12.46□□□□□ -0.41
CLCC1-202ENST00000348264 NMRAL1Q9HBL8 299 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 PRDM9Q9NQV7 894 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 ANKRD10Q9NXR5 420 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 NINJ2Q9NZG7 142 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 ZNF490Q9ULM2 529 aaPredicted RBP12.46□□□□□ -0.41
CLCC1-202ENST00000348264 OSGIN2Q9Y236 505 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 CLDN16Q9Y5I7 305 aa12.46□□□□□ -0.41
CLCC1-202ENST00000348264 ITPR2Q14571 2701 aa12.46□□□□□ -0.42
CLCC1-202ENST00000348264 TEX15Q9BXT5 2789 aa12.45□□□□□ -0.42
CLCC1-202ENST00000348264 ANKDD1BA6NHY2 528 aa12.45□□□□□ -0.42
CLCC1-202ENST00000348264 SAGE2PA6NJ88 616 aa12.45□□□□□ -0.42
CLCC1-202ENST00000348264 GABRR3A8MPY1 467 aa12.45□□□□□ -0.42
CLCC1-202ENST00000348264 CERS1P27544 350 aa12.45□□□□□ -0.42
CLCC1-202ENST00000348264 PLA2G16P53816 162 aa12.45□□□□□ -0.42
CLCC1-202ENST00000348264 RAB38P57729 211 aa12.45□□□□□ -0.42
CLCC1-202ENST00000348264 KCNK10P57789 538 aa12.45□□□□□ -0.42
CLCC1-202ENST00000348264 GTF3C1Q12789 2109 aa12.45□□□□□ -0.42
CLCC1-202ENST00000348264 CHIT1Q13231 466 aa12.45□□□□□ -0.42
CLCC1-202ENST00000348264 E2F2Q14209 437 aa12.45□□□□□ -0.42
CLCC1-202ENST00000348264 MEP1AQ16819 746 aa12.45□□□□□ -0.42
CLCC1-202ENST00000348264 ZNF766Q5HY98 468 aa12.45□□□□□ -0.42
CLCC1-202ENST00000348264 MROH9Q5TGP6 573 aa12.45□□□□□ -0.42
CLCC1-202ENST00000348264 SCUBE1Q8IWY4 988 aa12.45□□□□□ -0.42
CLCC1-202ENST00000348264 SLC5A8Q8N695 610 aa12.45□□□□□ -0.42
CLCC1-202ENST00000348264 FAM47BQ8NA70 645 aa12.45□□□□□ -0.42
CLCC1-202ENST00000348264 NOA1Q8NC60 698 aaKnown RBP12.45□□□□□ -0.42
CLCC1-202ENST00000348264 NFAM1Q8NET5 270 aaPredicted RBP12.45□□□□□ -0.42
CLCC1-202ENST00000348264 OR2L5Q8NG80 312 aa12.45□□□□□ -0.42
CLCC1-202ENST00000348264 SUN3Q8TAQ9 357 aa12.45□□□□□ -0.42
CLCC1-202ENST00000348264 CSF3RQ99062 836 aa12.45□□□□□ -0.42
CLCC1-202ENST00000348264 HES7Q9BYE0 225 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms