RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 ZBTB20Q9HC78 741 aaPredicted RBP20.44■□□□□ 0.86
PTPN18-202ENST00000347849 ASIC5Q9NY37 505 aa20.44■□□□□ 0.86
PTPN18-202ENST00000347849 HSPE1-MOB4S4R3N1 261 aa20.44■□□□□ 0.86
PTPN18-202ENST00000347849 TBX1O43435 398 aa20.43■□□□□ 0.86
PTPN18-202ENST00000347849 ETHE1O95571 254 aa20.43■□□□□ 0.86
PTPN18-202ENST00000347849 C1QCP02747 245 aa20.43■□□□□ 0.86
PTPN18-202ENST00000347849 NTRK1P04629 796 aa20.43■□□□□ 0.86
PTPN18-202ENST00000347849 EIF2DP41214 584 aaKnown RBP20.43■□□□□ 0.86
PTPN18-202ENST00000347849 MAGEA2P43356 314 aa20.43■□□□□ 0.86
PTPN18-202ENST00000347849 TSTA3Q13630 321 aaPredicted RBP20.43■□□□□ 0.86
PTPN18-202ENST00000347849 SMU1Q2TAY7 513 aa20.43■□□□□ 0.86
PTPN18-202ENST00000347849 ZNF551Q7Z340 670 aaPredicted RBP20.43■□□□□ 0.86
PTPN18-202ENST00000347849 TRMT11Q7Z4G4 463 aaKnown RBP20.43■□□□□ 0.86
PTPN18-202ENST00000347849 LYSMD2Q8IV50 215 aa20.43■□□□□ 0.86
PTPN18-202ENST00000347849 CDCA3Q99618 268 aaPredicted RBP20.43■□□□□ 0.86
PTPN18-202ENST00000347849 HDAC8Q9BY41 377 aa20.43■□□□□ 0.86
PTPN18-202ENST00000347849 EPHX3Q9H6B9 360 aa20.43■□□□□ 0.86
PTPN18-202ENST00000347849 CLEC1BQ9P126 229 aa20.43■□□□□ 0.86
PTPN18-202ENST00000347849 SLC23A2Q9UGH3 650 aa20.43■□□□□ 0.86
PTPN18-202ENST00000347849 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.43■□□□□ 0.86
PTPN18-202ENST00000347849 ERVK-11Q9UQG0 969 aa20.43■□□□□ 0.86
PTPN18-202ENST00000347849 DOCK9Q9BZ29 2069 aa20.43■□□□□ 0.86
PTPN18-202ENST00000347849 C1QTNF3-AMACRE9PGA6 284 aa20.43■□□□□ 0.86
PTPN18-202ENST00000347849 UPK1BO75841 260 aa20.43■□□□□ 0.86
PTPN18-202ENST00000347849 PCCBP05166 539 aa20.43■□□□□ 0.86
PTPN18-202ENST00000347849 LAMP2P13473 410 aa20.43■□□□□ 0.86
PTPN18-202ENST00000347849 MAGP20916 626 aa20.43■□□□□ 0.86
PTPN18-202ENST00000347849 KRT20P35900 424 aa20.43■□□□□ 0.86
PTPN18-202ENST00000347849 SLC14A1Q13336 389 aa20.43■□□□□ 0.86
PTPN18-202ENST00000347849 SF3B4Q15427 424 aaKnown RBP eCLIP20.43■□□□□ 0.861e-8■■■■■ 38.7
PTPN18-202ENST00000347849 COLEC12Q5KU26 742 aa20.43■□□□□ 0.86
PTPN18-202ENST00000347849 POC5Q8NA72 575 aa20.43■□□□□ 0.86
PTPN18-202ENST00000347849 OR56A3Q8NH54 315 aa20.43■□□□□ 0.86
PTPN18-202ENST00000347849 NEIL2Q969S2 332 aa20.43■□□□□ 0.86
PTPN18-202ENST00000347849 IL1RAPQ9NPH3 570 aa20.43■□□□□ 0.86
PTPN18-202ENST00000347849 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.42■□□□□ 0.86
PTPN18-202ENST00000347849 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.42■□□□□ 0.86
PTPN18-202ENST00000347849 AMD1P17707 334 aa20.42■□□□□ 0.86
PTPN18-202ENST00000347849 TGFBR2P37173 567 aa20.42■□□□□ 0.86
PTPN18-202ENST00000347849 ATAD3BQ5T9A4 648 aa20.42■□□□□ 0.86
PTPN18-202ENST00000347849 AGBL4Q5VU57 503 aa20.42■□□□□ 0.86
PTPN18-202ENST00000347849 TMEM184AQ6ZMB5 413 aa20.42■□□□□ 0.86
PTPN18-202ENST00000347849 PRSS48Q7RTY5 328 aa20.42■□□□□ 0.86
PTPN18-202ENST00000347849 HEATR4Q86WZ0 1026 aa20.42■□□□□ 0.86
PTPN18-202ENST00000347849 EHD1Q9H4M9 534 aa20.42■□□□□ 0.86
PTPN18-202ENST00000347849 NDRG4Q9ULP0 352 aaKnown RBP20.42■□□□□ 0.86
PTPN18-202ENST00000347849 SAMD4AQ9UPU9 718 aaKnown RBP20.42■□□□□ 0.86
PTPN18-202ENST00000347849 A0A096LPI6 279 aa20.42■□□□□ 0.86
PTPN18-202ENST00000347849 OR2A25A4D2G3 310 aa20.42■□□□□ 0.86
PTPN18-202ENST00000347849 MVKQ03426 396 aa20.42■□□□□ 0.86
PTPN18-202ENST00000347849 WSCD2Q2TBF2 565 aa20.42■□□□□ 0.86
PTPN18-202ENST00000347849 LRIF1Q5T3J3 769 aa20.42■□□□□ 0.86
PTPN18-202ENST00000347849 TSPYL5Q86VY4 417 aaPredicted RBP20.42■□□□□ 0.86
PTPN18-202ENST00000347849 GALNT13Q8IUC8 556 aa20.42■□□□□ 0.86
PTPN18-202ENST00000347849 ATG16L2Q8NAA4 619 aa20.42■□□□□ 0.86
PTPN18-202ENST00000347849 KLK6Q92876 244 aa20.42■□□□□ 0.86
PTPN18-202ENST00000347849 CMTM7Q96FZ5 175 aa20.42■□□□□ 0.86
PTPN18-202ENST00000347849 C6orf62Q9GZU0 229 aaPredicted RBP20.42■□□□□ 0.86
PTPN18-202ENST00000347849 GABARAPL1Q9H0R8 117 aa20.42■□□□□ 0.86
PTPN18-202ENST00000347849 MIR1-1HGQ9H1L0 117 aa20.42■□□□□ 0.86
PTPN18-202ENST00000347849 SLC6A17Q9H1V8 727 aa20.42■□□□□ 0.86
PTPN18-202ENST00000347849 CPNE5Q9HCH3 593 aa20.42■□□□□ 0.86
PTPN18-202ENST00000347849 TM9SF3Q9HD45 589 aa20.42■□□□□ 0.86
PTPN18-202ENST00000347849 MBNL1Q9NR56 388 aaKnown RBP20.42■□□□□ 0.86
PTPN18-202ENST00000347849 MSRAQ9UJ68 235 aa20.42■□□□□ 0.86
PTPN18-202ENST00000347849 CCNDBP1O95273 360 aa20.41■□□□□ 0.86
PTPN18-202ENST00000347849 DLGAP3O95886 979 aa20.41■□□□□ 0.86
PTPN18-202ENST00000347849 DNAJA1P31689 397 aaKnown RBP20.41■□□□□ 0.86
PTPN18-202ENST00000347849 NKX2-5P52952 324 aaPredicted RBP20.41■□□□□ 0.86
PTPN18-202ENST00000347849 CLDN8P56748 225 aa20.41■□□□□ 0.86
PTPN18-202ENST00000347849 ABHD18Q0P651 414 aa20.41■□□□□ 0.86
PTPN18-202ENST00000347849 CDC20Q12834 499 aa20.41■□□□□ 0.86
PTPN18-202ENST00000347849 ZNF404Q494X3 552 aa20.41■□□□□ 0.86
PTPN18-202ENST00000347849 LIPJQ5W064 366 aa20.41■□□□□ 0.86
PTPN18-202ENST00000347849 VTCN1Q7Z7D3 282 aa20.41■□□□□ 0.86
PTPN18-202ENST00000347849 CCDC71Q8IV32 467 aaPredicted RBP20.41■□□□□ 0.86
PTPN18-202ENST00000347849 C2orf73Q8N5S3 287 aaPredicted RBP20.41■□□□□ 0.86
PTPN18-202ENST00000347849 FOPNLQ96NB1 174 aa20.41■□□□□ 0.86
PTPN18-202ENST00000347849 CTRCQ99895 268 aa20.41■□□□□ 0.86
PTPN18-202ENST00000347849 CCNB1IP1Q9NPC3 277 aa20.41■□□□□ 0.86
PTPN18-202ENST00000347849 AASDHPPTQ9NRN7 309 aa20.41■□□□□ 0.86
PTPN18-202ENST00000347849 KRT84Q9NSB2 600 aa20.41■□□□□ 0.86
PTPN18-202ENST00000347849 GPRC5BQ9NZH0 403 aa20.41■□□□□ 0.86
PTPN18-202ENST00000347849 KIF17Q9P2E2 1029 aa20.41■□□□□ 0.86
PTPN18-202ENST00000347849 PLAGL1Q9UM63 463 aa20.41■□□□□ 0.86
PTPN18-202ENST00000347849 NUP214P35658 2090 aaPredicted RBP20.41■□□□□ 0.86
PTPN18-202ENST00000347849 CLDN24A6NM45 220 aa20.41■□□□□ 0.86
PTPN18-202ENST00000347849 SNPHO15079 494 aa20.41■□□□□ 0.86
PTPN18-202ENST00000347849 PCDH8O95206 1070 aa20.41■□□□□ 0.86
PTPN18-202ENST00000347849 ZNF24P17028 368 aa20.41■□□□□ 0.86
PTPN18-202ENST00000347849 TIE1P35590 1138 aa20.41■□□□□ 0.86
PTPN18-202ENST00000347849 LIPAP38571 399 aa20.41■□□□□ 0.86
PTPN18-202ENST00000347849 TBPL1P62380 186 aa20.41■□□□□ 0.86
PTPN18-202ENST00000347849 CST6Q15828 149 aa20.41■□□□□ 0.86
PTPN18-202ENST00000347849 STEAP3Q658P3 488 aa20.41■□□□□ 0.86
PTPN18-202ENST00000347849 KIAA1211LQ6NV74 962 aa20.41■□□□□ 0.86
PTPN18-202ENST00000347849 NOXRED1Q6NXP6 359 aa20.41■□□□□ 0.86
PTPN18-202ENST00000347849 ZCCHC8Q6NZY4 707 aaKnown RBP20.41■□□□□ 0.86
PTPN18-202ENST00000347849 HORMAD1Q86X24 394 aa20.41■□□□□ 0.86
PTPN18-202ENST00000347849 LACC1Q8IV20 430 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms