RNA–Protein interactions for RNA: ENST00000346141.10

TUBD1-203, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-203ENST00000346141 LGI4Q8N135 537 aa11.18□□□□□ -0.62
TUBD1-203ENST00000346141 BEST3Q8N1M1 668 aa11.18□□□□□ -0.62
TUBD1-203ENST00000346141 KRT78Q8N1N4 520 aa11.18□□□□□ -0.62
TUBD1-203ENST00000346141 CREB3L4Q8TEY5 395 aa11.18□□□□□ -0.62
TUBD1-203ENST00000346141 PARD6BQ9BYG5 372 aa11.18□□□□□ -0.62
TUBD1-203ENST00000346141 EHD1Q9H4M9 534 aa11.18□□□□□ -0.62
TUBD1-203ENST00000346141 ANKZF1Q9H8Y5 726 aa11.18□□□□□ -0.62
TUBD1-203ENST00000346141 CAB39LQ9H9S4 337 aa11.18□□□□□ -0.62
TUBD1-203ENST00000346141 PRDM9Q9NQV7 894 aa11.18□□□□□ -0.62
TUBD1-203ENST00000346141 WWOXQ9NZC7 414 aa11.18□□□□□ -0.62
TUBD1-203ENST00000346141 PCDHGB6Q9Y5F9 930 aa11.18□□□□□ -0.62
TUBD1-203ENST00000346141 A0A088AWK7 358 aa11.17□□□□□ -0.62
TUBD1-203ENST00000346141 NCF1BA6NI72 391 aaPredicted RBP11.17□□□□□ -0.62
TUBD1-203ENST00000346141 NCF1CA8MVU1 366 aaPredicted RBP11.17□□□□□ -0.62
TUBD1-203ENST00000346141 PHGDHO43175 533 aaKnown RBP11.17□□□□□ -0.62
TUBD1-203ENST00000346141 LRRTM2O43300 516 aa11.17□□□□□ -0.62
TUBD1-203ENST00000346141 B4GALT2O60909 372 aa11.17□□□□□ -0.62
TUBD1-203ENST00000346141 DNAJB6O75190 326 aa11.17□□□□□ -0.62
TUBD1-203ENST00000346141 B3GALT4O96024 378 aa11.17□□□□□ -0.62
TUBD1-203ENST00000346141 STSP08842 583 aa11.17□□□□□ -0.62
TUBD1-203ENST00000346141 SMIM10L1P0DMW3 83 aa11.17□□□□□ -0.62
TUBD1-203ENST00000346141 NCF1P14598 390 aaPredicted RBP11.17□□□□□ -0.62
TUBD1-203ENST00000346141 CD1DP15813 335 aa11.17□□□□□ -0.62
TUBD1-203ENST00000346141 ZNF10P21506 573 aaPredicted RBP11.17□□□□□ -0.62
TUBD1-203ENST00000346141 SPRP35270 261 aaPredicted RBP11.17□□□□□ -0.62
TUBD1-203ENST00000346141 GGT5P36269 586 aa11.17□□□□□ -0.62
TUBD1-203ENST00000346141 GDF5P43026 501 aa11.17□□□□□ -0.62
TUBD1-203ENST00000346141 TDGF1P3P51864 188 aa11.17□□□□□ -0.62
TUBD1-203ENST00000346141 PLTPP55058 493 aa11.17□□□□□ -0.62
TUBD1-203ENST00000346141 SLC26A5P58743 744 aa11.17□□□□□ -0.62
TUBD1-203ENST00000346141 RAB10P61026 200 aa11.17□□□□□ -0.62
TUBD1-203ENST00000346141 SLBPQ14493 270 aaKnown RBP eCLIP11.17□□□□□ -0.62
TUBD1-203ENST00000346141 ZKSCAN8Q15776 578 aaPredicted RBP11.17□□□□□ -0.62
TUBD1-203ENST00000346141 ZNF766Q5HY98 468 aa11.17□□□□□ -0.62
TUBD1-203ENST00000346141 TOR1AIP1Q5JTV8 583 aa11.17□□□□□ -0.62
TUBD1-203ENST00000346141 SULT1C3Q6IMI6 304 aa11.17□□□□□ -0.62
TUBD1-203ENST00000346141 GPSM1Q86YR5 675 aa11.17□□□□□ -0.62
TUBD1-203ENST00000346141 CRLF3Q8IUI8 442 aa11.17□□□□□ -0.62
TUBD1-203ENST00000346141 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.17□□□□□ -0.62
TUBD1-203ENST00000346141 AMER2Q8N7J2 671 aa11.17□□□□□ -0.62
TUBD1-203ENST00000346141 ARMC2Q8NEN0 867 aa11.17□□□□□ -0.62
TUBD1-203ENST00000346141 GAL3ST3Q96A11 431 aa11.17□□□□□ -0.62
TUBD1-203ENST00000346141 SMIM10Q96HG1 83 aa11.17□□□□□ -0.62
TUBD1-203ENST00000346141 FAR2Q96K12 515 aa11.17□□□□□ -0.62
TUBD1-203ENST00000346141 PTCHD1Q96NR3 888 aa11.17□□□□□ -0.62
TUBD1-203ENST00000346141 UTP23Q9BRU9 249 aaKnown RBP11.17□□□□□ -0.62
TUBD1-203ENST00000346141 UNKQ9C0B0 810 aaKnown RBP11.17□□□□□ -0.62
TUBD1-203ENST00000346141 KLHL31Q9H511 634 aa11.17□□□□□ -0.62
TUBD1-203ENST00000346141 NT5DC2Q9H857 520 aa11.17□□□□□ -0.62
TUBD1-203ENST00000346141 DNAJC11Q9NVH1 559 aa11.17□□□□□ -0.62
TUBD1-203ENST00000346141 COPG2Q9UBF2 871 aa11.17□□□□□ -0.62
TUBD1-203ENST00000346141 IGKV3D-11A0A0A0MRZ8 115 aa11.16□□□□□ -0.62
TUBD1-203ENST00000346141 A0A1B0GUH1 482 aa11.16□□□□□ -0.62
TUBD1-203ENST00000346141 TCRBV16S1A1N1A0A5B0 115 aa11.16□□□□□ -0.62
TUBD1-203ENST00000346141 CLGNO14967 610 aa11.16□□□□□ -0.62
TUBD1-203ENST00000346141 STK16O75716 305 aa11.16□□□□□ -0.62
TUBD1-203ENST00000346141 CLDN1O95832 211 aa11.16□□□□□ -0.62
TUBD1-203ENST00000346141 STX2P32856 288 aa11.16□□□□□ -0.62
TUBD1-203ENST00000346141 GPX6P59796 221 aa11.16□□□□□ -0.62
TUBD1-203ENST00000346141 NAB1Q13506 487 aa11.16□□□□□ -0.62
TUBD1-203ENST00000346141 TUBA3CQ13748 450 aa11.16□□□□□ -0.62
TUBD1-203ENST00000346141 C18orf21Q32NC0 220 aaPredicted RBP11.16□□□□□ -0.62
TUBD1-203ENST00000346141 GRTP1Q5TC63 336 aa11.16□□□□□ -0.62
TUBD1-203ENST00000346141 FCRLBQ6BAA4 426 aa11.16□□□□□ -0.62
TUBD1-203ENST00000346141 TUBA3EQ6PEY2 450 aa11.16□□□□□ -0.62
TUBD1-203ENST00000346141 CTAGE3PQ8IX95 158 aa11.16□□□□□ -0.62
TUBD1-203ENST00000346141 SPATA6LQ8N4H0 392 aa11.16□□□□□ -0.62
TUBD1-203ENST00000346141 HORMAD2Q8N7B1 307 aa11.16□□□□□ -0.62
TUBD1-203ENST00000346141 FBXO25Q8TCJ0 367 aa11.16□□□□□ -0.62
TUBD1-203ENST00000346141 ELP5Q8TE02 316 aa11.16□□□□□ -0.62
TUBD1-203ENST00000346141 UBXN10Q96LJ8 280 aa11.16□□□□□ -0.62
TUBD1-203ENST00000346141 TMEM79Q9BSE2 394 aa11.16□□□□□ -0.62
TUBD1-203ENST00000346141 NPLQ9BXD5 320 aaPredicted RBP11.16□□□□□ -0.62
TUBD1-203ENST00000346141 FAM53CQ9NYF3 392 aa11.16□□□□□ -0.62
TUBD1-203ENST00000346141 MMACHCQ9Y4U1 282 aa11.16□□□□□ -0.62
TUBD1-203ENST00000346141 LRIT2A6NDA9 550 aa11.15□□□□□ -0.62
TUBD1-203ENST00000346141 SAGE2PA6NJ88 616 aa11.15□□□□□ -0.62
TUBD1-203ENST00000346141 GABRR3A8MPY1 467 aa11.15□□□□□ -0.62
TUBD1-203ENST00000346141 C4orf51C9J302 202 aa11.15□□□□□ -0.62
TUBD1-203ENST00000346141 TAPBPO15533 448 aa11.15□□□□□ -0.62
TUBD1-203ENST00000346141 CLEC3AO75596 197 aa11.15□□□□□ -0.62
TUBD1-203ENST00000346141 C1QAP02745 245 aa11.15□□□□□ -0.62
TUBD1-203ENST00000346141 S100BP04271 92 aaPredicted RBP11.15□□□□□ -0.62
TUBD1-203ENST00000346141 MAOAP21397 527 aa11.15□□□□□ -0.62
TUBD1-203ENST00000346141 MAGEA4P43358 317 aa11.15□□□□□ -0.62
TUBD1-203ENST00000346141 BTN3A2P78410 334 aa11.15□□□□□ -0.62
TUBD1-203ENST00000346141 BTG2P78543 158 aa11.15□□□□□ -0.62
TUBD1-203ENST00000346141 TERF2Q15554 542 aa11.15□□□□□ -0.62
TUBD1-203ENST00000346141 OR1C1Q15619 314 aa11.15□□□□□ -0.62
TUBD1-203ENST00000346141 PDK4Q16654 411 aa11.15□□□□□ -0.62
TUBD1-203ENST00000346141 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.15□□□□□ -0.62
TUBD1-203ENST00000346141 KBTBD12Q3ZCT8 623 aa11.15□□□□□ -0.62
TUBD1-203ENST00000346141 GLE1Q53GS7 698 aaKnown RBP11.15□□□□□ -0.62
TUBD1-203ENST00000346141 HIST2H2BCQ6DN03 193 aa11.15□□□□□ -0.62
TUBD1-203ENST00000346141 GFRALQ6UXV0 394 aa11.15□□□□□ -0.62
TUBD1-203ENST00000346141 CCDC25Q86WR0 208 aa11.15□□□□□ -0.62
TUBD1-203ENST00000346141 CYP4X1Q8N118 509 aa11.15□□□□□ -0.62
TUBD1-203ENST00000346141 CA13Q8N1Q1 262 aa11.15□□□□□ -0.62
TUBD1-203ENST00000346141 TMEM178AQ8NBL3 297 aa11.15□□□□□ -0.62
TUBD1-203ENST00000346141 NOA1Q8NC60 698 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms