RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 FCRL5Q96RD9 977 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 TSSK6Q9BXA6 273 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 ABCG4Q9H172 646 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 OXTRP30559 389 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 KRBOX4Q5JUW0 171 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 ATG9BQ674R7 924 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 SLC8B1Q6J4K2 584 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 SLC29A4Q7RTT9 530 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 VTCN1Q7Z7D3 282 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 ACDQ96AP0 544 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 TMEM41AQ96HV5 264 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 PIP5K1AQ99755 562 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 TEX264Q9Y6I9 313 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 ECI2O75521 394 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 EPHX2P34913 555 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 PRAMEF13Q5VWM6 474 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 SNAPC3Q92966 411 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 LMLNQ96KR4 655 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 SAV1Q9H4B6 383 aaPredicted RBP18.74■□□□□ 0.59
HDAC4-201ENST00000345617 EXTL2Q9UBQ6 330 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 KCNQ2O43526 872 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 SULT1B1O43704 296 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 CHRM1P11229 460 aaPredicted RBP18.74■□□□□ 0.59
HDAC4-201ENST00000345617 MYF6P23409 242 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 CNTN2Q02246 1040 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 HACD4Q5VWC8 232 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 KCTD18Q6PI47 426 aaPredicted RBP18.74■□□□□ 0.59
HDAC4-201ENST00000345617 ZBED3Q96IU2 234 aaPredicted RBP18.74■□□□□ 0.59
HDAC4-201ENST00000345617 MROQ9BYG7 248 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 AMBNQ9NP70 447 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 SLIT2O94813 1529 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 OR6C6A6NF89 314 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 CLDN5O00501 218 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 UTS2RQ9UKP6 389 aa18.74■□□□□ 0.59
HDAC4-201ENST00000345617 HMCESQ96FZ2 354 aa18.73■□□□□ 0.59
HDAC4-201ENST00000345617 GPR22Q99680 433 aa18.73■□□□□ 0.59
HDAC4-201ENST00000345617 CLCA3PQ9Y6N3 262 aa18.73■□□□□ 0.59
HDAC4-201ENST00000345617 CNTN5O94779 1100 aa18.73■□□□□ 0.59
HDAC4-201ENST00000345617 SFTPBP07988 381 aa18.73■□□□□ 0.59
HDAC4-201ENST00000345617 DSC2Q02487 901 aa18.73■□□□□ 0.59
HDAC4-201ENST00000345617 ALAS2P22557 587 aa18.73■□□□□ 0.59
HDAC4-201ENST00000345617 XKR5Q6UX68 686 aa18.73■□□□□ 0.59
HDAC4-201ENST00000345617 CMKLR1Q99788 373 aa18.73■□□□□ 0.59
HDAC4-201ENST00000345617 RHCEP18577 417 aa18.73■□□□□ 0.59
HDAC4-201ENST00000345617 KLF1Q13351 362 aaPredicted RBP18.73■□□□□ 0.59
HDAC4-201ENST00000345617 ZNF460Q14592 562 aa18.73■□□□□ 0.59
HDAC4-201ENST00000345617 CFAP52Q8N1V2 620 aa18.73■□□□□ 0.59
HDAC4-201ENST00000345617 GRHL3Q8TE85 626 aa18.73■□□□□ 0.59
HDAC4-201ENST00000345617 LRFN1Q9P244 771 aa18.73■□□□□ 0.59
HDAC4-201ENST00000345617 TP53BP1Q12888 1972 aaPredicted RBP18.73■□□□□ 0.59
HDAC4-201ENST00000345617 PTPRAP18433 802 aa18.73■□□□□ 0.59
HDAC4-201ENST00000345617 TTYH2Q9BSA4 534 aa18.73■□□□□ 0.59
HDAC4-201ENST00000345617 ACTR1BP42025 376 aa18.73■□□□□ 0.59
HDAC4-201ENST00000345617 LIPKQ5VXJ0 399 aa18.73■□□□□ 0.59
HDAC4-201ENST00000345617 DCBLD1Q8N8Z6 715 aa18.73■□□□□ 0.59
HDAC4-201ENST00000345617 DGAT2Q96PD7 388 aa18.73■□□□□ 0.59
HDAC4-201ENST00000345617 CDC14AQ9UNH5 594 aa18.73■□□□□ 0.59
HDAC4-201ENST00000345617 PRSS51A0A1B0GVH4 220 aa18.73■□□□□ 0.59
HDAC4-201ENST00000345617 SC5DO75845 299 aa18.73■□□□□ 0.59
HDAC4-201ENST00000345617 MAGEA3P43357 314 aa18.73■□□□□ 0.59
HDAC4-201ENST00000345617 PRSS48Q7RTY5 328 aa18.73■□□□□ 0.59
HDAC4-201ENST00000345617 CCDC71Q8IV32 467 aaPredicted RBP18.73■□□□□ 0.59
HDAC4-201ENST00000345617 C4BPAP04003 597 aaKnown RBP18.72■□□□□ 0.59
HDAC4-201ENST00000345617 IRF9Q00978 393 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 ZNF763Q0D2J5 394 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 MTFR2Q6P444 385 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 TBX5Q99593 518 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 RNF121Q9H920 327 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 DEC1Q9P2X7 70 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 NOX1Q9Y5S8 564 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 MST1RQ04912 1400 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 FAM170BA6NMN3 283 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 A8MXE2 369 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 SEPT4O43236 478 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 BCHEP06276 602 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 PIM1P11309 404 aaPredicted RBP18.72■□□□□ 0.59
HDAC4-201ENST00000345617 FECHP22830 423 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 VSX2P58304 361 aaPredicted RBP18.72■□□□□ 0.59
HDAC4-201ENST00000345617 RPS3AP61247 264 aaKnown RBP18.72■□□□□ 0.59
HDAC4-201ENST00000345617 GNPDA2Q8TDQ7 276 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 COQ10AQ96MF6 247 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 ACTL8Q9H568 366 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 KIF13BQ9NQT8 1826 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 CERS1P27544 350 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 RPP30P78346 268 aaKnown RBP18.72■□□□□ 0.59
HDAC4-201ENST00000345617 CDC6Q99741 560 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 SSX3Q99909 188 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 SLC2A11Q9BYW1 496 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 QPCTLQ9NXS2 382 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 DLDP09622 509 aaKnown RBP18.72■□□□□ 0.59
HDAC4-201ENST00000345617 ZNF41P51814 821 aaPredicted RBP18.72■□□□□ 0.59
HDAC4-201ENST00000345617 EXOC3L2Q2M3D2 409 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 ZNF792Q3KQV3 632 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 PLD6Q8N2A8 252 aaKnown RBP18.72■□□□□ 0.59
HDAC4-201ENST00000345617 G6PC3Q9BUM1 346 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 TCRBV7S2A1N4TA0A589 114 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 GLUD1P00367 558 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 PCCBP05166 539 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 ZNF436Q9C0F3 470 aaPredicted RBP18.72■□□□□ 0.59
HDAC4-201ENST00000345617 ABCG5Q9H222 651 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms