RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 XKR6Q5GH73 641 aa13.56□□□□□ -0.24
HMGN3-202ENST00000344726 PLAG1Q6DJT9 500 aa13.56□□□□□ -0.24
HMGN3-202ENST00000344726 NIPAL1Q6NVV3 410 aa13.56□□□□□ -0.24
HMGN3-202ENST00000344726 KRT78Q8N1N4 520 aa13.56□□□□□ -0.24
HMGN3-202ENST00000344726 CA13Q8N1Q1 262 aa13.56□□□□□ -0.24
HMGN3-202ENST00000344726 PLD6Q8N2A8 252 aaKnown RBP13.56□□□□□ -0.24
HMGN3-202ENST00000344726 TTLQ8NG68 377 aa13.56□□□□□ -0.24
HMGN3-202ENST00000344726 UBTD2Q8WUN7 234 aa13.56□□□□□ -0.24
HMGN3-202ENST00000344726 SLC44A1Q8WWI5 657 aa13.56□□□□□ -0.24
HMGN3-202ENST00000344726 CCT6BQ92526 530 aa13.56□□□□□ -0.24
HMGN3-202ENST00000344726 GAL3ST3Q96A11 431 aa13.56□□□□□ -0.24
HMGN3-202ENST00000344726 PTCD3Q96EY7 689 aaKnown RBP13.56□□□□□ -0.24
HMGN3-202ENST00000344726 GPR78Q96P69 363 aa13.56□□□□□ -0.24
HMGN3-202ENST00000344726 NPAS2Q99743 824 aa13.56□□□□□ -0.24
HMGN3-202ENST00000344726 A0A096LPK6 155 aa13.55□□□□□ -0.24
HMGN3-202ENST00000344726 KIF2AO00139 706 aaPredicted RBP13.55□□□□□ -0.24
HMGN3-202ENST00000344726 ERI3O43414 337 aaKnown RBP13.55□□□□□ -0.24
HMGN3-202ENST00000344726 CLEC3AO75596 197 aa13.55□□□□□ -0.24
HMGN3-202ENST00000344726 WDPCPO95876 746 aa13.55□□□□□ -0.24
HMGN3-202ENST00000344726 S100BP04271 92 aaPredicted RBP13.55□□□□□ -0.24
HMGN3-202ENST00000344726 RNH1P13489 461 aaKnown RBP13.55□□□□□ -0.24
HMGN3-202ENST00000344726 ICAM2P13598 275 aa13.55□□□□□ -0.24
HMGN3-202ENST00000344726 MAOAP21397 527 aa13.55□□□□□ -0.24
HMGN3-202ENST00000344726 TNFSF10P50591 281 aa13.55□□□□□ -0.24
HMGN3-202ENST00000344726 STXBP1P61764 594 aaKnown RBP13.55□□□□□ -0.24
HMGN3-202ENST00000344726 SKP1P63208 163 aa13.55□□□□□ -0.24
HMGN3-202ENST00000344726 BTN3A2P78410 334 aa13.55□□□□□ -0.24
HMGN3-202ENST00000344726 ARG2P78540 354 aa13.55□□□□□ -0.24
HMGN3-202ENST00000344726 SRSF11Q05519 484 aaKnown RBP13.55□□□□□ -0.24
HMGN3-202ENST00000344726 CHIT1Q13231 466 aa13.55□□□□□ -0.24
HMGN3-202ENST00000344726 ADPRMQ3LIE5 342 aa13.55□□□□□ -0.24
HMGN3-202ENST00000344726 PAPD4Q6PIY7 484 aaKnown RBP13.55□□□□□ -0.24
HMGN3-202ENST00000344726 LRRC70Q7Z2Q7 622 aa13.55□□□□□ -0.24
HMGN3-202ENST00000344726 OR1N1Q8NGS0 311 aa13.55□□□□□ -0.24
HMGN3-202ENST00000344726 KIF18AQ8NI77 898 aa13.55□□□□□ -0.24
HMGN3-202ENST00000344726 RHEBL1Q8TAI7 183 aa13.55□□□□□ -0.24
HMGN3-202ENST00000344726 UHMK1Q8TAS1 419 aaKnown RBP13.55□□□□□ -0.24
HMGN3-202ENST00000344726 QRFPRQ96P65 431 aa13.55□□□□□ -0.24
HMGN3-202ENST00000344726 TAAR6Q96RI8 345 aa13.55□□□□□ -0.24
HMGN3-202ENST00000344726 PITHD1Q9GZP4 211 aaPredicted RBP13.55□□□□□ -0.24
HMGN3-202ENST00000344726 RHBGQ9H310 441 aa13.55□□□□□ -0.24
HMGN3-202ENST00000344726 CLK4Q9HAZ1 481 aaKnown RBP13.55□□□□□ -0.24
HMGN3-202ENST00000344726 ZNF358Q9NW07 568 aa13.55□□□□□ -0.24
HMGN3-202ENST00000344726 IGKV3D-11A0A0A0MRZ8 115 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 WIPF3A6NGB9 483 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 ANKDD1BA6NHY2 528 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 LRRC14BA6NHZ5 514 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 K7EPI3 171 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 MAN1A2O60476 641 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 KLHL2O95198 593 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 LDLRP01130 860 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 JAK1P23458 1154 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 GSTM2P28161 218 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 TYK2P29597 1187 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 CASP2P42575 452 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 MAGEA12P43365 314 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 SERPINB8P50452 374 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 ST13P50502 369 aaKnown RBP13.54□□□□□ -0.24
HMGN3-202ENST00000344726 HNRNPFP52597 415 aaKnown RBP13.54□□□□□ -0.24
HMGN3-202ENST00000344726 OR4D2P58180 307 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 IRF8Q02556 426 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 ACAP2Q15057 778 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 TBCCQ15814 346 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 FAM83EQ2M2I3 478 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 FCRLBQ6BAA4 426 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 H3F3CQ6NXT2 135 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 QSOX2Q6ZRP7 698 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 CEP128Q6ZU80 1094 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 LRRN4CLQ8ND94 238 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 ST6GALNAC3Q8NDV1 305 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 TMEM52Q8NDY8 209 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 OR2L5Q8NG80 312 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 FAR1Q8WVX9 515 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 HAS2Q92819 552 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 ISL2Q96A47 359 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 SEC16BQ96JE7 1060 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 PTCHD1Q96NR3 888 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 PAFAH2Q99487 392 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 SLX1AQ9BQ83 275 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 EFCAB11Q9BUY7 163 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 REXO4Q9GZR2 422 aaKnown RBP13.54□□□□□ -0.24
HMGN3-202ENST00000344726 NECTIN3Q9NQS3 549 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 OPTCQ9UBM4 332 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 PLEKHB1Q9UF11 243 aaPredicted RBP13.54□□□□□ -0.24
HMGN3-202ENST00000344726 NFU1Q9UMS0 254 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 CLDN16Q9Y5I7 305 aa13.54□□□□□ -0.24
HMGN3-202ENST00000344726 UNC79Q9P2D8 2635 aa13.53□□□□□ -0.24
HMGN3-202ENST00000344726 TCRBV16S1A1N1A0A5B0 115 aa13.53□□□□□ -0.24
HMGN3-202ENST00000344726 A1L4Q6 167 aa13.53□□□□□ -0.24
HMGN3-202ENST00000344726 DYTNA2CJ06 578 aa13.53□□□□□ -0.24
HMGN3-202ENST00000344726 A8MUI8 341 aa13.53□□□□□ -0.24
HMGN3-202ENST00000344726 TGFBR3LH3BV60 316 aa13.53□□□□□ -0.24
HMGN3-202ENST00000344726 KLK8O60259 260 aa13.53□□□□□ -0.24
HMGN3-202ENST00000344726 PRMT3O60678 531 aa13.53□□□□□ -0.24
HMGN3-202ENST00000344726 CERS1P27544 350 aa13.53□□□□□ -0.24
HMGN3-202ENST00000344726 PLA2G16P53816 162 aa13.53□□□□□ -0.24
HMGN3-202ENST00000344726 SLC26A5P58743 744 aa13.53□□□□□ -0.24
HMGN3-202ENST00000344726 ZNF33BQ06732 778 aa13.53□□□□□ -0.24
HMGN3-202ENST00000344726 ACTN3Q08043 901 aaPredicted RBP13.53□□□□□ -0.24
HMGN3-202ENST00000344726 PCDH1Q08174 1060 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms