RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 DNAJB13P59910 316 aa12.5□□□□□ -0.41
TUBD1-202ENST00000340993 DSG2Q14126 1118 aa12.5□□□□□ -0.41
TUBD1-202ENST00000340993 PRMT9Q6P2P2 845 aa12.5□□□□□ -0.41
TUBD1-202ENST00000340993 ZNF793Q6ZN11 406 aa12.5□□□□□ -0.41
TUBD1-202ENST00000340993 ATG14Q6ZNE5 492 aa12.5□□□□□ -0.41
TUBD1-202ENST00000340993 OVCH1Q7RTY7 1134 aa12.5□□□□□ -0.41
TUBD1-202ENST00000340993 UBE3DQ7Z6J8 389 aa12.5□□□□□ -0.41
TUBD1-202ENST00000340993 CUZD1Q86UP6 607 aa12.5□□□□□ -0.41
TUBD1-202ENST00000340993 GAL3ST3Q96A11 431 aa12.5□□□□□ -0.41
TUBD1-202ENST00000340993 MIEF2Q96C03 454 aa12.5□□□□□ -0.41
TUBD1-202ENST00000340993 C8orf44Q96CB5 159 aa12.5□□□□□ -0.41
TUBD1-202ENST00000340993 REPS1Q96D71 796 aa12.5□□□□□ -0.41
TUBD1-202ENST00000340993 CRB3Q9BUF7 120 aa12.5□□□□□ -0.41
TUBD1-202ENST00000340993 MRPL1Q9BYD6 325 aaKnown RBP12.5□□□□□ -0.41
TUBD1-202ENST00000340993 NT5DC2Q9H857 520 aa12.5□□□□□ -0.41
TUBD1-202ENST00000340993 RALYQ9UKM9 306 aaKnown RBP12.5□□□□□ -0.41
TUBD1-202ENST00000340993 FBXW2Q9UKT8 454 aa12.5□□□□□ -0.41
TUBD1-202ENST00000340993 MKL2Q9ULH7 1088 aa12.5□□□□□ -0.41
TUBD1-202ENST00000340993 CDC14AQ9UNH5 594 aa12.5□□□□□ -0.41
TUBD1-202ENST00000340993 NUP210LQ5VU65 1888 aa12.49□□□□□ -0.41
TUBD1-202ENST00000340993 URADA6NGE7 173 aa12.49□□□□□ -0.41
TUBD1-202ENST00000340993 ZNF891A8MT65 544 aaPredicted RBP12.49□□□□□ -0.41
TUBD1-202ENST00000340993 H0YIV9 168 aa12.49□□□□□ -0.41
TUBD1-202ENST00000340993 MANBAO00462 879 aa12.49□□□□□ -0.41
TUBD1-202ENST00000340993 CHST10O43529 356 aa12.49□□□□□ -0.41
TUBD1-202ENST00000340993 ITM2AO43736 263 aa12.49□□□□□ -0.41
TUBD1-202ENST00000340993 PRKRAO75569 313 aaKnown RBP12.49□□□□□ -0.41
TUBD1-202ENST00000340993 KLF7O75840 302 aaPredicted RBP12.49□□□□□ -0.41
TUBD1-202ENST00000340993 ZWINTO95229 277 aa12.49□□□□□ -0.41
TUBD1-202ENST00000340993 UMODP07911 640 aa12.49□□□□□ -0.41
TUBD1-202ENST00000340993 ZGLP1P0C6A0 271 aa12.49□□□□□ -0.41
TUBD1-202ENST00000340993 PIM1P11309 404 aaPredicted RBP12.49□□□□□ -0.41
TUBD1-202ENST00000340993 EFNA3P52797 238 aa12.49□□□□□ -0.41
TUBD1-202ENST00000340993 PHEXP78562 749 aa12.49□□□□□ -0.41
TUBD1-202ENST00000340993 HMGCS1Q01581 520 aa12.49□□□□□ -0.41
TUBD1-202ENST00000340993 VAC14Q08AM6 782 aa12.49□□□□□ -0.41
TUBD1-202ENST00000340993 FAM53BQ14153 422 aa12.49□□□□□ -0.41
TUBD1-202ENST00000340993 ARL13AQ5H913 290 aaPredicted RBP12.49□□□□□ -0.41
TUBD1-202ENST00000340993 KHDRBS2Q5VWX1 349 aaKnown RBP12.49□□□□□ -0.41
TUBD1-202ENST00000340993 MRPL14Q6P1L8 145 aaKnown RBP12.49□□□□□ -0.41
TUBD1-202ENST00000340993 METTL2BQ6P1Q9 378 aaKnown RBP12.49□□□□□ -0.41
TUBD1-202ENST00000340993 ZC3H7AQ8IWR0 971 aaKnown RBP12.49□□□□□ -0.41
TUBD1-202ENST00000340993 OR2L5Q8NG80 312 aa12.49□□□□□ -0.41
TUBD1-202ENST00000340993 EXTL1Q92935 676 aa12.49□□□□□ -0.41
TUBD1-202ENST00000340993 ATP6V1G3Q96LB4 118 aa12.49□□□□□ -0.41
TUBD1-202ENST00000340993 PPP1R36Q96LQ0 422 aa12.49□□□□□ -0.41
TUBD1-202ENST00000340993 SPSB2Q99619 263 aa12.49□□□□□ -0.41
TUBD1-202ENST00000340993 DPH2Q9BQC3 489 aaPredicted RBP12.49□□□□□ -0.41
TUBD1-202ENST00000340993 NKIRAS1Q9NYS0 192 aa12.49□□□□□ -0.41
TUBD1-202ENST00000340993 TRPS1Q9UHF7 1281 aa12.49□□□□□ -0.41
TUBD1-202ENST00000340993 C3orf18Q9UK00 162 aa12.49□□□□□ -0.41
TUBD1-202ENST00000340993 PADI2Q9Y2J8 665 aa12.49□□□□□ -0.41
TUBD1-202ENST00000340993 ATRXP46100 2492 aa12.49□□□□□ -0.41
TUBD1-202ENST00000340993 PLPP1O14494 284 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 TM9SF1O15321 606 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 UGDHO60701 494 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 WDR4P57081 412 aaKnown RBP12.48□□□□□ -0.41
TUBD1-202ENST00000340993 EEF1A2Q05639 463 aaKnown RBP12.48□□□□□ -0.41
TUBD1-202ENST00000340993 CDC20Q12834 499 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 RAPSNQ13702 412 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 ATP1A4Q13733 1029 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 RUNX2Q13950 521 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 ABRAXAS2Q15018 415 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 SH2D4BQ5SQS7 431 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 AGBL2Q5U5Z8 902 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 CPZQ66K79 652 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 ABHD17CQ6PCB6 329 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 CLNKQ7Z7G1 428 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 AFAP1L2Q8N4X5 818 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 EFCAB3Q8N7B9 438 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 SREK1Q8WXA9 508 aaKnown RBP12.48□□□□□ -0.41
TUBD1-202ENST00000340993 CMTM7Q96FZ5 175 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 SLC45A3Q96JT2 553 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 CSF3RQ99062 836 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 SNX6Q9UNH7 406 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 MAP4K5Q9Y4K4 846 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 ACTL7BQ9Y614 415 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 SLC22A7Q9Y694 548 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 KMT2BQ9UMN6 2715 aaPredicted RBP12.48□□□□□ -0.41
TUBD1-202ENST00000340993 TNRC6AQ8NDV7 1962 aaKnown RBP12.48□□□□□ -0.41
TUBD1-202ENST00000340993 IGHV3-20A0A0C4DH32 117 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 ARGFXA6NJG6 315 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 K7ENP7 123 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 B3GALT2O43825 422 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 EEDO75530 441 aaKnown RBP12.48□□□□□ -0.41
TUBD1-202ENST00000340993 DNAJB5O75953 348 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 ESRRBO95718 433 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 HEXBP07686 556 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 E2F2Q14209 437 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 RCN2Q14257 317 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 DEPDC1Q5TB30 811 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 INO80CQ6PI98 192 aaPredicted RBP12.48□□□□□ -0.41
TUBD1-202ENST00000340993 LANCL3Q6ZV70 420 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 CHSY3Q70JA7 882 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 CA13Q8N1Q1 262 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 OR2Y1Q8NGV0 311 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 TSLPQ969D9 159 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 MVB12AQ96EY5 273 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 EFHD1Q9BUP0 239 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 EBPLQ9BY08 206 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms