RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 SLU7O95391 586 aaKnown RBP14.5□□□□□ -0.09
VAPA-201ENST00000340541 C8orf89P0DMQ9 161 aa14.5□□□□□ -0.09
VAPA-201ENST00000340541 IL10P22301 178 aa14.5□□□□□ -0.09
VAPA-201ENST00000340541 STXBP1P61764 594 aaKnown RBP14.5□□□□□ -0.09
VAPA-201ENST00000340541 MINDY4Q4G0A6 757 aa14.5□□□□□ -0.09
VAPA-201ENST00000340541 SLC6A19Q695T7 634 aa14.5□□□□□ -0.09
VAPA-201ENST00000340541 GRHL2Q6ISB3 625 aa14.5□□□□□ -0.09
VAPA-201ENST00000340541 LANCL3Q6ZV70 420 aa14.5□□□□□ -0.09
VAPA-201ENST00000340541 NDUFAF7Q7L592 441 aa14.5□□□□□ -0.09
VAPA-201ENST00000340541 PARP9Q8IXQ6 854 aa14.5□□□□□ -0.09
VAPA-201ENST00000340541 RBMXL3Q8N7X1 1067 aaKnown RBP14.5□□□□□ -0.09
VAPA-201ENST00000340541 Q8NA96 180 aa14.5□□□□□ -0.09
VAPA-201ENST00000340541 OR2L5Q8NG80 312 aa14.5□□□□□ -0.09
VAPA-201ENST00000340541 OR7G3Q8NG95 312 aa14.5□□□□□ -0.09
VAPA-201ENST00000340541 ZNF473Q8WTR7 871 aaKnown RBP14.5□□□□□ -0.09
VAPA-201ENST00000340541 UBLCP1Q8WVY7 318 aaPredicted RBP14.5□□□□□ -0.09
VAPA-201ENST00000340541 CCT6BQ92526 530 aa14.5□□□□□ -0.09
VAPA-201ENST00000340541 TBC1D20Q96BZ9 403 aa14.5□□□□□ -0.09
VAPA-201ENST00000340541 VPS50Q96JG6 964 aa14.5□□□□□ -0.09
VAPA-201ENST00000340541 SCYL1Q96KG9 808 aa14.5□□□□□ -0.09
VAPA-201ENST00000340541 IMMP1LQ96LU5 166 aa14.5□□□□□ -0.09
VAPA-201ENST00000340541 ZNF700Q9H0M5 742 aa14.5□□□□□ -0.09
VAPA-201ENST00000340541 TMEM216Q9P0N5 145 aa14.5□□□□□ -0.09
VAPA-201ENST00000340541 TMCO1Q9UM00 188 aa14.5□□□□□ -0.09
VAPA-201ENST00000340541 TNPO3Q9Y5L0 923 aaKnown RBP14.5□□□□□ -0.09
VAPA-201ENST00000340541 SHANK1Q9Y566 2161 aa14.5□□□□□ -0.09
VAPA-201ENST00000340541 TEX15Q9BXT5 2789 aa14.5□□□□□ -0.09
VAPA-201ENST00000340541 ICE1Q9Y2F5 2266 aa14.49□□□□□ -0.09
VAPA-201ENST00000340541 A0A0G2JN53 185 aa14.49□□□□□ -0.09
VAPA-201ENST00000340541 FOXO6A8MYZ6 492 aa14.49□□□□□ -0.09
VAPA-201ENST00000340541 TCP11X1B4DZS4 312 aa14.49□□□□□ -0.09
VAPA-201ENST00000340541 OR7A17O14581 309 aa14.49□□□□□ -0.09
VAPA-201ENST00000340541 ERI3O43414 337 aaKnown RBP14.49□□□□□ -0.09
VAPA-201ENST00000340541 CDC123O75794 336 aaPredicted RBP14.49□□□□□ -0.09
VAPA-201ENST00000340541 ALPPP05187 535 aa14.49□□□□□ -0.09
VAPA-201ENST00000340541 FHP07954 510 aa14.49□□□□□ -0.09
VAPA-201ENST00000340541 ITGA3P26006 1051 aa14.49□□□□□ -0.09
VAPA-201ENST00000340541 EEF1DP29692 281 aaKnown RBP14.49□□□□□ -0.09
VAPA-201ENST00000340541 SKP1P63208 163 aa14.49□□□□□ -0.09
VAPA-201ENST00000340541 BTN3A2P78410 334 aa14.49□□□□□ -0.09
VAPA-201ENST00000340541 GTF2H2Q13888 395 aa14.49□□□□□ -0.09
VAPA-201ENST00000340541 RUNX2Q13950 521 aa14.49□□□□□ -0.09
VAPA-201ENST00000340541 HIST2H2ACQ16777 129 aaPredicted RBP14.49□□□□□ -0.09
VAPA-201ENST00000340541 HIST2H2AA3Q6FI13 130 aa14.49□□□□□ -0.09
VAPA-201ENST00000340541 GTF2H2CQ6P1K8 395 aa14.49□□□□□ -0.09
VAPA-201ENST00000340541 MED27Q6P2C8 311 aa14.49□□□□□ -0.09
VAPA-201ENST00000340541 ABHD17CQ6PCB6 329 aa14.49□□□□□ -0.09
VAPA-201ENST00000340541 SH2D5Q6ZV89 423 aa14.49□□□□□ -0.09
VAPA-201ENST00000340541 UBE3DQ7Z6J8 389 aa14.49□□□□□ -0.09
VAPA-201ENST00000340541 CA13Q8N1Q1 262 aa14.49□□□□□ -0.09
VAPA-201ENST00000340541 PLPP5Q8NEB5 264 aa14.49□□□□□ -0.09
VAPA-201ENST00000340541 ACMSDQ8TDX5 336 aa14.49□□□□□ -0.09
VAPA-201ENST00000340541 PSMF1Q92530 271 aa14.49□□□□□ -0.09
VAPA-201ENST00000340541 UBE2E3Q969T4 207 aa14.49□□□□□ -0.09
VAPA-201ENST00000340541 PHF21BQ96EK2 531 aa14.49□□□□□ -0.09
VAPA-201ENST00000340541 F2RL3Q96RI0 385 aa14.49□□□□□ -0.09
VAPA-201ENST00000340541 WDR77Q9BQA1 342 aaPredicted RBP14.49□□□□□ -0.09
VAPA-201ENST00000340541 CCDC77Q9BR77 488 aa14.49□□□□□ -0.09
VAPA-201ENST00000340541 MS4A8Q9BY19 250 aa14.49□□□□□ -0.09
VAPA-201ENST00000340541 REXO4Q9GZR2 422 aaKnown RBP14.49□□□□□ -0.09
VAPA-201ENST00000340541 IPPKQ9H8X2 491 aa14.49□□□□□ -0.09
VAPA-201ENST00000340541 ZBTB20Q9HC78 741 aaPredicted RBP14.49□□□□□ -0.09
VAPA-201ENST00000340541 ZBTB26Q9HCK0 441 aa14.49□□□□□ -0.09
VAPA-201ENST00000340541 TBK1Q9UHD2 729 aa14.49□□□□□ -0.09
VAPA-201ENST00000340541 PCTPQ9UKL6 214 aa14.49□□□□□ -0.09
VAPA-201ENST00000340541 TSC22D4Q9Y3Q8 395 aa14.49□□□□□ -0.09
VAPA-201ENST00000340541 ANGPTL3Q9Y5C1 460 aa14.49□□□□□ -0.09
VAPA-201ENST00000340541 CNTRLQ7Z7A1 2325 aa14.48□□□□□ -0.09
VAPA-201ENST00000340541 NSG1A0A0A6YYJ2 146 aa14.48□□□□□ -0.09
VAPA-201ENST00000340541 IGHV3-20A0A0C4DH32 117 aa14.48□□□□□ -0.09
VAPA-201ENST00000340541 A0A1W2PPM1 405 aa14.48□□□□□ -0.09
VAPA-201ENST00000340541 A8MT66 165 aa14.48□□□□□ -0.09
VAPA-201ENST00000340541 GOLGA8RI6L899 631 aa14.48□□□□□ -0.09
VAPA-201ENST00000340541 UGDHO60701 494 aa14.48□□□□□ -0.09
VAPA-201ENST00000340541 CELA2AP08217 269 aa14.48□□□□□ -0.09
VAPA-201ENST00000340541 RPS17P08708 135 aaKnown RBP14.48□□□□□ -0.09
VAPA-201ENST00000340541 HSD17B3P37058 310 aa14.48□□□□□ -0.09
VAPA-201ENST00000340541 PLA2G16P53816 162 aa14.48□□□□□ -0.09
VAPA-201ENST00000340541 RASA2Q15283 850 aa14.48□□□□□ -0.09
VAPA-201ENST00000340541 MFSD4BQ5TF39 518 aa14.48□□□□□ -0.09
VAPA-201ENST00000340541 LIPJQ5W064 366 aa14.48□□□□□ -0.09
VAPA-201ENST00000340541 WDR93Q6P2C0 686 aa14.48□□□□□ -0.09
VAPA-201ENST00000340541 ANKRD37Q7Z713 158 aa14.48□□□□□ -0.09
VAPA-201ENST00000340541 LCA5Q86VQ0 697 aa14.48□□□□□ -0.09
VAPA-201ENST00000340541 TDRPQ86YL5 185 aa14.48□□□□□ -0.09
VAPA-201ENST00000340541 IQCKQ8N0W5 287 aa14.48□□□□□ -0.09
VAPA-201ENST00000340541 CYP4X1Q8N118 509 aa14.48□□□□□ -0.09
VAPA-201ENST00000340541 RNF175Q8N4F7 328 aa14.48□□□□□ -0.09
VAPA-201ENST00000340541 L3MBTL4Q8NA19 623 aa14.48□□□□□ -0.09
VAPA-201ENST00000340541 OR52B6Q8NGF0 335 aa14.48□□□□□ -0.09
VAPA-201ENST00000340541 AENQ8WTP8 325 aaKnown RBP14.48□□□□□ -0.09
VAPA-201ENST00000340541 TSLPQ969D9 159 aa14.48□□□□□ -0.09
VAPA-201ENST00000340541 THOC3Q96J01 351 aaKnown RBP14.48□□□□□ -0.09
VAPA-201ENST00000340541 NSUN5Q96P11 429 aaKnown RBP14.48□□□□□ -0.09
VAPA-201ENST00000340541 C1QTNF3Q9BXJ4 246 aa14.48□□□□□ -0.09
VAPA-201ENST00000340541 LHPPQ9H008 270 aa14.48□□□□□ -0.09
VAPA-201ENST00000340541 ACTR8Q9H981 624 aa14.48□□□□□ -0.09
VAPA-201ENST00000340541 PRDM7Q9NQW5 492 aa14.48□□□□□ -0.09
VAPA-201ENST00000340541 RIC8BQ9NVN3 520 aa14.48□□□□□ -0.09
VAPA-201ENST00000340541 B3GNT3Q9Y2A9 372 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms