RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 DOHHQ9BU89 302 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 PRDM5Q9NQX1 630 aaPredicted RBP9.03□□□□□ -0.96
NECAP1-201ENST00000339754 CLN6Q9NWW5 311 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 TMCC3Q9ULS5 477 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 DOCK4Q8N1I0 1966 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 ZAR1LA6NP61 321 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 FPGTO14772 594 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 ADAMDEC1O15204 470 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 CHP2O43745 196 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 SCN2BO60939 215 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 ATG13O75143 517 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 ENTPD6O75354 484 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 PPM1BO75688 479 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 IGHA2P01877 340 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 POU2F1P14859 743 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 SDC1P18827 310 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 TNFRSF1BP20333 461 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 LHX1P48742 406 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 CLCN4P51793 760 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 WNT3P56703 355 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 CDC42P60953 191 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 UBE3AQ05086 875 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 FCN2Q15485 313 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 UBXN11Q5T124 520 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 TRIQKQ629K1 86 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 ZNF621Q6ZSS3 439 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 BBS7Q8IWZ6 715 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 LAS2Q8IYD9 372 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 NANOGP1Q8N7R0 232 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 OR9Q2Q8NGE9 314 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 MARC2Q969Z3 335 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 TMEM43Q9BTV4 400 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 HTATIP2Q9BUP3 242 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 NTMT1Q9BV86 223 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 CUEDC1Q9NWM3 386 aaPredicted RBP9.03□□□□□ -0.96
NECAP1-201ENST00000339754 TRPS1Q9UHF7 1281 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 ING4Q9UNL4 249 aa9.03□□□□□ -0.96
NECAP1-201ENST00000339754 PRAMEF25A6NGN4 478 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 A8MVJ9 347 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 GTPBP1O00178 669 aaKnown RBP9.02□□□□□ -0.97
NECAP1-201ENST00000339754 QSOX1O00391 747 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 PTGESO14684 152 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 AKAP8O43823 692 aaKnown RBP9.02□□□□□ -0.97
NECAP1-201ENST00000339754 FZD6O60353 706 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 EBLN1P0CF75 366 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 PRPS2P11908 318 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 RHOQP17081 205 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 HK1P19367 917 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 SDC2P34741 201 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 CNR2P34972 360 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 MAP2K6P52564 334 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 CDH12P55289 794 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 ABRQ12979 859 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 MTAPQ13126 283 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 TTLL4Q14679 1199 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 NCF4Q15080 339 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 COL28A1Q2UY09 1125 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 KLHL22Q53GT1 634 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 LIPKQ5VXJ0 399 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 SHEQ5VZ18 495 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 C22orf42Q6IC83 251 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 TMEM107Q6UX40 140 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 LIPIQ6XZB0 460 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 TRILQ7L0X0 811 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 PDZD3Q86UT5 571 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 C1orf52Q8N6N3 182 aaKnown RBP9.02□□□□□ -0.97
NECAP1-201ENST00000339754 FAM193BQ96PV7 902 aaPredicted RBP9.02□□□□□ -0.97
NECAP1-201ENST00000339754 PANX1Q96RD7 426 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 POLR2J2Q9GZM3 115 aaKnown RBP9.02□□□□□ -0.97
NECAP1-201ENST00000339754 POLR1EQ9GZS1 481 aaKnown RBP9.02□□□□□ -0.97
NECAP1-201ENST00000339754 CHST8Q9H2A9 424 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 PIGUQ9H490 435 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 ANKRA2Q9H9E1 313 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 ABCC13Q9NSE7 274 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 TMEM248Q9NWD8 314 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 ZMAT5Q9UDW3 170 aaKnown RBP9.02□□□□□ -0.97
NECAP1-201ENST00000339754 FTSJ1Q9UET6 329 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 DIMT1Q9UNQ2 313 aaKnown RBP9.02□□□□□ -0.97
NECAP1-201ENST00000339754 DHRS7Q9Y394 339 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 PCNTO95613 3336 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 DNAJC25-GNG10A0A024R161 153 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 A0A0A6YYJ9 748 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 SMIM30A4D0T7 59 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 MPZL2O60487 215 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 SERPINI2O75830 405 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 MPC2O95563 127 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 PDYNP01213 254 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 LHCGRP22888 699 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 AQP1P29972 269 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 TTPAP49638 278 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 ETV1P50549 477 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 SELENOWP63302 87 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 IL10RBQ08334 325 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 MLLT11Q13015 90 aaPredicted RBP9.02□□□□□ -0.97
NECAP1-201ENST00000339754 EXOSC2Q13868 293 aaKnown RBP9.02□□□□□ -0.97
NECAP1-201ENST00000339754 SF3A2Q15428 464 aaKnown RBP9.02□□□□□ -0.97
NECAP1-201ENST00000339754 LDLRAD1Q5T700 205 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 FRMPD2BQ6IN97 320 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 CNIH2Q6PI25 160 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 PAQR6Q6TCH4 344 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms