RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 TSPEARQ8WU66 669 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 MACROD1Q9BQ69 325 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 EBPLQ9BY08 206 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 DPY30Q9C005 99 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 AICDAQ9GZX7 198 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 SERTAD3Q9UJW9 196 aa13.82□□□□□ -0.2
NIPAL3-202ENST00000339255 CASC3O15234 703 aaKnown RBP13.81□□□□□ -0.2
NIPAL3-202ENST00000339255 SMIM10L1P0DMW3 83 aa13.81□□□□□ -0.2
NIPAL3-202ENST00000339255 DDX5P17844 614 aaKnown RBP13.81□□□□□ -0.2
NIPAL3-202ENST00000339255 TACR1P25103 407 aa13.81□□□□□ -0.2
NIPAL3-202ENST00000339255 PIK3R1P27986 724 aa13.81□□□□□ -0.2
NIPAL3-202ENST00000339255 CSTF2P33240 577 aaKnown RBP eCLIP13.81□□□□□ -0.2
NIPAL3-202ENST00000339255 HPCAL1P37235 193 aa13.81□□□□□ -0.2
NIPAL3-202ENST00000339255 SLC9A5Q14940 896 aa13.81□□□□□ -0.2
NIPAL3-202ENST00000339255 MUM1Q2TAK8 710 aa13.81□□□□□ -0.2
NIPAL3-202ENST00000339255 FAM214AQ32MH5 1076 aa13.81□□□□□ -0.2
NIPAL3-202ENST00000339255 AGKQ53H12 422 aa13.81□□□□□ -0.2
NIPAL3-202ENST00000339255 CCDC121Q6ZUS5 278 aa13.81□□□□□ -0.2
NIPAL3-202ENST00000339255 ARHGEF39Q8N4T4 335 aa13.81□□□□□ -0.2
NIPAL3-202ENST00000339255 ACOT4Q8N9L9 421 aa13.81□□□□□ -0.2
NIPAL3-202ENST00000339255 NETO1Q8TDF5 533 aa13.81□□□□□ -0.2
NIPAL3-202ENST00000339255 TESCQ96BS2 214 aa13.81□□□□□ -0.2
NIPAL3-202ENST00000339255 SMIM10Q96HG1 83 aa13.81□□□□□ -0.2
NIPAL3-202ENST00000339255 TSSK3Q96PN8 268 aa13.81□□□□□ -0.2
NIPAL3-202ENST00000339255 TEFMQ96QE5 360 aaKnown RBP13.81□□□□□ -0.2
NIPAL3-202ENST00000339255 SERINC2Q96SA4 455 aa13.81□□□□□ -0.2
NIPAL3-202ENST00000339255 SLC25A23Q9BV35 468 aa13.81□□□□□ -0.2
NIPAL3-202ENST00000339255 CLK4Q9HAZ1 481 aaKnown RBP13.81□□□□□ -0.2
NIPAL3-202ENST00000339255 ANKHQ9HCJ1 492 aa13.81□□□□□ -0.2
NIPAL3-202ENST00000339255 PRDM7Q9NQW5 492 aa13.81□□□□□ -0.2
NIPAL3-202ENST00000339255 LYARQ9NX58 379 aaKnown RBP13.81□□□□□ -0.2
NIPAL3-202ENST00000339255 AKAP7Q9P0M2 348 aaPredicted RBP13.81□□□□□ -0.2
NIPAL3-202ENST00000339255 HYKKA2RU49 373 aa13.8□□□□□ -0.2
NIPAL3-202ENST00000339255 FAM234BA2RU67 622 aa13.8□□□□□ -0.2
NIPAL3-202ENST00000339255 RTCAO00442 366 aaKnown RBP13.8□□□□□ -0.2
NIPAL3-202ENST00000339255 B3GALT2O43825 422 aa13.8□□□□□ -0.2
NIPAL3-202ENST00000339255 HNRNPCL1O60812 293 aaKnown RBP13.8□□□□□ -0.2
NIPAL3-202ENST00000339255 EEDO75530 441 aaKnown RBP13.8□□□□□ -0.2
NIPAL3-202ENST00000339255 UBOX5O94941 541 aa13.8□□□□□ -0.2
NIPAL3-202ENST00000339255 FOLR1P15328 257 aa13.8□□□□□ -0.2
NIPAL3-202ENST00000339255 CSRP1P21291 193 aaKnown RBP13.8□□□□□ -0.2
NIPAL3-202ENST00000339255 KCNK10P57789 538 aa13.8□□□□□ -0.2
NIPAL3-202ENST00000339255 RAB8AP61006 207 aa13.8□□□□□ -0.2
NIPAL3-202ENST00000339255 GPR19Q15760 415 aa13.8□□□□□ -0.2
NIPAL3-202ENST00000339255 YTHDF3Q7Z739 585 aaKnown RBP13.8□□□□□ -0.2
NIPAL3-202ENST00000339255 TREML1Q86YW5 311 aa13.8□□□□□ -0.2
NIPAL3-202ENST00000339255 TMEM132CQ8N3T6 1108 aa13.8□□□□□ -0.2
NIPAL3-202ENST00000339255 RP9Q8TA86 221 aaKnown RBP13.8□□□□□ -0.2
NIPAL3-202ENST00000339255 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.8□□□□□ -0.2
NIPAL3-202ENST00000339255 ZCCHC10Q8TBK6 192 aa13.8□□□□□ -0.2
NIPAL3-202ENST00000339255 ZNF501Q96CX3 271 aaPredicted RBP13.8□□□□□ -0.2
NIPAL3-202ENST00000339255 MTERF3Q96E29 417 aa13.8□□□□□ -0.2
NIPAL3-202ENST00000339255 MVB12AQ96EY5 273 aa13.8□□□□□ -0.2
NIPAL3-202ENST00000339255 PRPF18Q99633 342 aaKnown RBP13.8□□□□□ -0.2
NIPAL3-202ENST00000339255 STRADBQ9C0K7 418 aa13.8□□□□□ -0.2
NIPAL3-202ENST00000339255 ACTL8Q9H568 366 aa13.8□□□□□ -0.2
NIPAL3-202ENST00000339255 TXLNGQ9NUQ3 528 aa13.8□□□□□ -0.2
NIPAL3-202ENST00000339255 CCDC167Q9P0B6 97 aa13.8□□□□□ -0.2
NIPAL3-202ENST00000339255 BAIAP2L1Q9UHR4 511 aa13.8□□□□□ -0.2
NIPAL3-202ENST00000339255 SRPK3Q9UPE1 567 aa13.8□□□□□ -0.2
NIPAL3-202ENST00000339255 KIF26BQ2KJY2 2108 aa13.8□□□□□ -0.2
NIPAL3-202ENST00000339255 BBIP1A8MTZ0 92 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 C4orf51C9J302 202 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 H3BMH7 237 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 GALR3O60755 368 aaPredicted RBP13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 ATP5HO75947 161 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 KIAA0754O94854 1291 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 IL6P05231 212 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 SNRPB2P08579 225 aaKnown RBP13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 POLR2JP52435 117 aaKnown RBP13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 PDX1P52945 283 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 ARSFP54793 590 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 UFM1P61960 85 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 BTN3A2P78410 334 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 IL11RAQ14626 422 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 HEPACAMQ14CZ8 416 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 DEFB134Q4QY38 66 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 PAOXQ6QHF9 649 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 BLOC1S3Q6QNY0 202 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 ZNF793Q6ZN11 406 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 R3HCC1LQ7Z5L2 792 aaKnown RBP13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 B3GNT8Q7Z7M8 397 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 RIMKLAQ8IXN7 391 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 RCBTB1Q8NDN9 531 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 OR9I1Q8NGQ6 314 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 C16orf78Q8WTQ4 265 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 ZNF764Q96H86 408 aaPredicted RBP13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 FAIM2Q9BWQ8 316 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 SORBS1Q9BX66 1292 aaKnown RBP13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 NPLQ9BXD5 320 aaPredicted RBP13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 CLMPQ9H6B4 373 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 MS4A12Q9NXJ0 267 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 SIDT1Q9NXL6 827 aaKnown RBP13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 TAGLN3Q9UI15 199 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 PHF11Q9UIL8 331 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 A0A0G2JN53 185 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 SCAMP2O15127 329 aaKnown RBP13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 TMPRSS11DO60235 418 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 GBAP04062 536 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 FAM58BPP0C7Q3 252 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms