RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 TUBB4AP04350 444 aa13.27□□□□□ -0.29
COMMD4-202ENST00000338995 SSR4P51571 173 aa13.27□□□□□ -0.29
COMMD4-202ENST00000338995 CDKN2DP55273 166 aa13.27□□□□□ -0.29
COMMD4-202ENST00000338995 TIAL1Q01085 375 aaKnown RBP eCLIP13.27□□□□□ -0.29
COMMD4-202ENST00000338995 PLGLB1Q02325 96 aa13.27□□□□□ -0.29
COMMD4-202ENST00000338995 CYP1B1Q16678 543 aa13.27□□□□□ -0.29
COMMD4-202ENST00000338995 KCTD19Q17RG1 926 aaPredicted RBP13.27□□□□□ -0.29
COMMD4-202ENST00000338995 FAM45BPQ6NSW5 357 aa13.27□□□□□ -0.29
COMMD4-202ENST00000338995 NCCRP1Q6ZVX7 275 aaPredicted RBP13.27□□□□□ -0.29
COMMD4-202ENST00000338995 GALNT7Q86SF2 657 aa13.27□□□□□ -0.29
COMMD4-202ENST00000338995 THOC6Q86W42 341 aaKnown RBP13.27□□□□□ -0.29
COMMD4-202ENST00000338995 SPNS2Q8IVW8 549 aa13.27□□□□□ -0.29
COMMD4-202ENST00000338995 RASGEF1CQ8N431 466 aa13.27□□□□□ -0.29
COMMD4-202ENST00000338995 ZFP62Q8NB50 900 aaPredicted RBP13.27□□□□□ -0.29
COMMD4-202ENST00000338995 FAM45AQ8TCE6 357 aa13.27□□□□□ -0.29
COMMD4-202ENST00000338995 OR4K3Q96R72 315 aa13.27□□□□□ -0.29
COMMD4-202ENST00000338995 NPLQ9BXD5 320 aaPredicted RBP13.27□□□□□ -0.29
COMMD4-202ENST00000338995 SLC6A16Q9GZN6 736 aa13.27□□□□□ -0.29
COMMD4-202ENST00000338995 NEU2Q9Y3R4 380 aa13.27□□□□□ -0.29
COMMD4-202ENST00000338995 MED13LQ71F56 2210 aa13.27□□□□□ -0.29
COMMD4-202ENST00000338995 IGKV3D-11A0A0A0MRZ8 115 aa13.26□□□□□ -0.29
COMMD4-202ENST00000338995 A8MVJ9 347 aa13.26□□□□□ -0.29
COMMD4-202ENST00000338995 ACOT7O00154 380 aa13.26□□□□□ -0.29
COMMD4-202ENST00000338995 PGRMC1O00264 195 aaKnown RBP13.26□□□□□ -0.29
COMMD4-202ENST00000338995 B3GALT4O96024 378 aa13.26□□□□□ -0.29
COMMD4-202ENST00000338995 SMIM10L1P0DMW3 83 aa13.26□□□□□ -0.29
COMMD4-202ENST00000338995 SAT1P21673 171 aa13.26□□□□□ -0.29
COMMD4-202ENST00000338995 GABRB3P28472 473 aa13.26□□□□□ -0.29
COMMD4-202ENST00000338995 FNTAP49354 379 aa13.26□□□□□ -0.29
COMMD4-202ENST00000338995 HSD17B7P56937 341 aa13.26□□□□□ -0.29
COMMD4-202ENST00000338995 KRTAP10-9P60411 292 aa13.26□□□□□ -0.29
COMMD4-202ENST00000338995 BTN3A2P78410 334 aa13.26□□□□□ -0.29
COMMD4-202ENST00000338995 REEP5Q00765 189 aa13.26□□□□□ -0.29
COMMD4-202ENST00000338995 SLC13A2Q13183 592 aa13.26□□□□□ -0.29
COMMD4-202ENST00000338995 BMPR2Q13873 1038 aa13.26□□□□□ -0.29
COMMD4-202ENST00000338995 TESK1Q15569 626 aa13.26□□□□□ -0.29
COMMD4-202ENST00000338995 TOR1AIP1Q5JTV8 583 aa13.26□□□□□ -0.29
COMMD4-202ENST00000338995 RBM20Q5T481 1227 aaKnown RBP13.26□□□□□ -0.29
COMMD4-202ENST00000338995 ZNF227Q86WZ6 799 aa13.26□□□□□ -0.29
COMMD4-202ENST00000338995 GAS2L3Q86XJ1 694 aa13.26□□□□□ -0.29
COMMD4-202ENST00000338995 CNTN4Q8IWV2 1026 aa13.26□□□□□ -0.29
COMMD4-202ENST00000338995 CHERPQ8IWX8 916 aaKnown RBP13.26□□□□□ -0.29
COMMD4-202ENST00000338995 CLYBLQ8N0X4 340 aa13.26□□□□□ -0.29
COMMD4-202ENST00000338995 CA13Q8N1Q1 262 aa13.26□□□□□ -0.29
COMMD4-202ENST00000338995 TMEM132CQ8N3T6 1108 aa13.26□□□□□ -0.29
COMMD4-202ENST00000338995 NKAPQ8N5F7 415 aaKnown RBP13.26□□□□□ -0.29
COMMD4-202ENST00000338995 ACBD4Q8NC06 268 aa13.26□□□□□ -0.29
COMMD4-202ENST00000338995 C7orf57Q8NEG2 295 aa13.26□□□□□ -0.29
COMMD4-202ENST00000338995 ANKRD7Q92527 254 aa13.26□□□□□ -0.29
COMMD4-202ENST00000338995 SMIM10Q96HG1 83 aa13.26□□□□□ -0.29
COMMD4-202ENST00000338995 TSNARE1Q96NA8 513 aa13.26□□□□□ -0.29
COMMD4-202ENST00000338995 EGFL8Q99944 293 aa13.26□□□□□ -0.29
COMMD4-202ENST00000338995 TREX2Q9BQ50 279 aaPredicted RBP13.26□□□□□ -0.29
COMMD4-202ENST00000338995 ZNF559Q9BR84 538 aa13.26□□□□□ -0.29
COMMD4-202ENST00000338995 CAPS2Q9BXY5 557 aa13.26□□□□□ -0.29
COMMD4-202ENST00000338995 NECTIN3Q9NQS3 549 aa13.26□□□□□ -0.29
COMMD4-202ENST00000338995 PRTFDC1Q9NRG1 225 aa13.26□□□□□ -0.29
COMMD4-202ENST00000338995 HPF1Q9NWY4 346 aa13.26□□□□□ -0.29
COMMD4-202ENST00000338995 PDE9AO76083 593 aa13.25□□□□□ -0.29
COMMD4-202ENST00000338995 GNAZP19086 355 aa13.25□□□□□ -0.29
COMMD4-202ENST00000338995 GSTM2P28161 218 aa13.25□□□□□ -0.29
COMMD4-202ENST00000338995 RFC3P40938 356 aa13.25□□□□□ -0.29
COMMD4-202ENST00000338995 HNMTP50135 292 aa13.25□□□□□ -0.29
COMMD4-202ENST00000338995 PPIAP62937 165 aaKnown RBP13.25□□□□□ -0.29
COMMD4-202ENST00000338995 PMPCAQ10713 525 aa13.25□□□□□ -0.29
COMMD4-202ENST00000338995 HYAL2Q12891 473 aa13.25□□□□□ -0.29
COMMD4-202ENST00000338995 CMPK2Q5EBM0 449 aa13.25□□□□□ -0.29
COMMD4-202ENST00000338995 FGD2Q7Z6J4 655 aa13.25□□□□□ -0.29
COMMD4-202ENST00000338995 TMPRSS11BQ86T26 416 aa13.25□□□□□ -0.29
COMMD4-202ENST00000338995 SLC22A16Q86VW1 577 aa13.25□□□□□ -0.29
COMMD4-202ENST00000338995 ZNF595Q8IYB9 648 aa13.25□□□□□ -0.29
COMMD4-202ENST00000338995 KRT78Q8N1N4 520 aa13.25□□□□□ -0.29
COMMD4-202ENST00000338995 AGGF1Q8N302 714 aaeCLIP13.25□□□□□ -0.29
COMMD4-202ENST00000338995 APCDD1LQ8NCL9 501 aa13.25□□□□□ -0.29
COMMD4-202ENST00000338995 MYRIPQ8NFW9 859 aa13.25□□□□□ -0.29
COMMD4-202ENST00000338995 CREB3L4Q8TEY5 395 aa13.25□□□□□ -0.29
COMMD4-202ENST00000338995 ASB15Q8WXK1 588 aa13.25□□□□□ -0.29
COMMD4-202ENST00000338995 GAL3ST3Q96A11 431 aa13.25□□□□□ -0.29
COMMD4-202ENST00000338995 CERS2Q96G23 380 aa13.25□□□□□ -0.29
COMMD4-202ENST00000338995 MS4A14Q96JA4 679 aa13.25□□□□□ -0.29
COMMD4-202ENST00000338995 SEC16BQ96JE7 1060 aa13.25□□□□□ -0.29
COMMD4-202ENST00000338995 PDLIM2Q96JY6 352 aa13.25□□□□□ -0.29
COMMD4-202ENST00000338995 DEFB127Q9H1M4 99 aa13.25□□□□□ -0.29
COMMD4-202ENST00000338995 KLHL31Q9H511 634 aa13.25□□□□□ -0.29
COMMD4-202ENST00000338995 KCNN3Q9UGI6 736 aa13.25□□□□□ -0.29
COMMD4-202ENST00000338995 ASIC3Q9UHC3 531 aa13.25□□□□□ -0.29
COMMD4-202ENST00000338995 PPIEQ9UNP9 301 aaKnown RBP13.25□□□□□ -0.29
COMMD4-202ENST00000338995 RNF6Q9Y252 685 aa13.25□□□□□ -0.29
COMMD4-202ENST00000338995 SLC22A14Q9Y267 594 aa13.25□□□□□ -0.29
COMMD4-202ENST00000338995 CLCA3PQ9Y6N3 262 aa13.25□□□□□ -0.29
COMMD4-202ENST00000338995 CSMD1Q96PZ7 3565 aa13.25□□□□□ -0.29
COMMD4-202ENST00000338995 ANKDD1BA6NHY2 528 aa13.24□□□□□ -0.29
COMMD4-202ENST00000338995 B3GALT2O43825 422 aa13.24□□□□□ -0.29
COMMD4-202ENST00000338995 IFNA16P05015 189 aa13.24□□□□□ -0.29
COMMD4-202ENST00000338995 C1GALT1C1LP0DN25 315 aa13.24□□□□□ -0.29
COMMD4-202ENST00000338995 GPR85P60893 370 aa13.24□□□□□ -0.29
COMMD4-202ENST00000338995 CDKL1Q00532 357 aa13.24□□□□□ -0.29
COMMD4-202ENST00000338995 TGM3Q08188 693 aa13.24□□□□□ -0.29
COMMD4-202ENST00000338995 ILF2Q12905 390 aaKnown RBP13.24□□□□□ -0.29
COMMD4-202ENST00000338995 TEDDM1Q5T9Z0 273 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms