RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 FOXM1Q08050 763 aa13.98□□□□□ -0.17
CBX3-201ENST00000337620 TGM3Q08188 693 aa13.98□□□□□ -0.17
CBX3-201ENST00000337620 COL9A2Q14055 689 aaPredicted RBP13.98□□□□□ -0.17
CBX3-201ENST00000337620 DEFB110Q30KQ9 67 aa13.98□□□□□ -0.17
CBX3-201ENST00000337620 R3HCC1LQ7Z5L2 792 aaKnown RBP13.98□□□□□ -0.17
CBX3-201ENST00000337620 MMP21Q8N119 569 aa13.98□□□□□ -0.17
CBX3-201ENST00000337620 FAM156AQ8NDB6 213 aa13.98□□□□□ -0.17
CBX3-201ENST00000337620 OR8J2Q8NGG1 315 aa13.98□□□□□ -0.17
CBX3-201ENST00000337620 ZCCHC10Q8TBK6 192 aa13.98□□□□□ -0.17
CBX3-201ENST00000337620 TBCDQ9BTW9 1192 aa13.98□□□□□ -0.17
CBX3-201ENST00000337620 MIEF1Q9NQG6 463 aa13.98□□□□□ -0.17
CBX3-201ENST00000337620 ATP6V1HQ9UI12 483 aa13.98□□□□□ -0.17
CBX3-201ENST00000337620 R4GN57 208 aa13.98□□□□□ -0.17
CBX3-201ENST00000337620 A0A0A6YYD5 115 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 B4GAT1O43505 415 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 EFNA1P20827 205 aaPredicted RBP13.97□□□□□ -0.17
CBX3-201ENST00000337620 HIST1H1TP22492 207 aaPredicted RBP13.97□□□□□ -0.17
CBX3-201ENST00000337620 ME2P23368 584 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 ALDH9A1P49189 494 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 VSX2P58304 361 aaPredicted RBP13.97□□□□□ -0.17
CBX3-201ENST00000337620 BTN3A2P78410 334 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 SLAMF1Q13291 335 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 SLC9A5Q14940 896 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 RABL3Q5HYI8 236 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 NANOGP8Q6NSW7 305 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 USP53Q70EK8 1073 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 IKBIPQ70UQ0 350 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 NET1Q7Z628 596 aaPredicted RBP13.97□□□□□ -0.17
CBX3-201ENST00000337620 SLC15A3Q8IY34 581 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 KIAA2013Q8IYS2 634 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 EID2Q8N6I1 236 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 ZNF655Q8N720 491 aaPredicted RBP13.97□□□□□ -0.17
CBX3-201ENST00000337620 ACOT4Q8N9L9 421 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 GAL3ST3Q96A11 431 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 PPCDCQ96CD2 204 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 COQ8BQ96D53 544 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 CGREF1Q99674 301 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 INPP5KQ9BT40 448 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 COPS7BQ9H9Q2 264 aaPredicted RBP13.97□□□□□ -0.17
CBX3-201ENST00000337620 NANOGQ9H9S0 305 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 POMPQ9Y244 141 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 L3MBTL1Q9Y468 752 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 CPED1A4D0V7 1026 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 URADA6NGE7 173 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 RFXANKO14593 260 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 HCRTR1O43613 425 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 DUX1O43812 170 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 ENTPD5O75356 428 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 ANP32DO95626 131 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 GSNP06396 782 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 FAM58BPP0C7Q3 252 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 ATP5A1P25705 553 aaKnown RBP13.97□□□□□ -0.17
CBX3-201ENST00000337620 CERS1P27544 350 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 RPL3P39023 403 aaKnown RBP13.97□□□□□ -0.17
CBX3-201ENST00000337620 MPLP40238 635 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 ERFP50548 548 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 WNT3P56703 355 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 KLC1Q07866 573 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 HEPACAMQ14CZ8 416 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 NR0B2Q15466 257 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 ZNF385BQ569K4 471 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 SAMD4BQ5PRF9 694 aaKnown RBP13.97□□□□□ -0.17
CBX3-201ENST00000337620 VPS37AQ8NEZ2 397 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 UTP15Q8TED0 518 aaKnown RBP13.97□□□□□ -0.17
CBX3-201ENST00000337620 CCDC74AQ96AQ1 378 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 MIEF2Q96C03 454 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 TCTN2Q96GX1 697 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 RAB33BQ9H082 229 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 KCNH6Q9H252 994 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 SERHLQ9NQF3 203 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 STARD5Q9NSY2 213 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 ATAD3AQ9NVI7 634 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 FAM120CQ9NX05 1096 aaKnown RBP13.97□□□□□ -0.17
CBX3-201ENST00000337620 SOHLH2Q9NX45 425 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 CMTM6Q9NX76 183 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 VAPAQ9P0L0 249 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 EPHA6Q9UF33 1036 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.97□□□□□ -0.17
CBX3-201ENST00000337620 CROCCQ5TZA2 2017 aa13.97□□□□□ -0.17
CBX3-201ENST00000337620 IGHV5-51A0A0C4DH38 117 aa13.96□□□□□ -0.17
CBX3-201ENST00000337620 PRORSD1PA6NEY8 169 aa13.96□□□□□ -0.17
CBX3-201ENST00000337620 TLCD2A6NGC4 264 aa13.96□□□□□ -0.17
CBX3-201ENST00000337620 NME4O00746 187 aa13.96□□□□□ -0.17
CBX3-201ENST00000337620 MGRN1O60291 552 aa13.96□□□□□ -0.17
CBX3-201ENST00000337620 CPSF4O95639 269 aaKnown RBP13.96□□□□□ -0.17
CBX3-201ENST00000337620 ARFIP1P53367 373 aa13.96□□□□□ -0.17
CBX3-201ENST00000337620 GPLD1P80108 840 aa13.96□□□□□ -0.17
CBX3-201ENST00000337620 ZC3H12BQ5HYM0 836 aaKnown RBP13.96□□□□□ -0.17
CBX3-201ENST00000337620 WASHC2DQ5SRD0 308 aa13.96□□□□□ -0.17
CBX3-201ENST00000337620 MSANTD1Q6ZTZ1 278 aa13.96□□□□□ -0.17
CBX3-201ENST00000337620 CAMKMTQ7Z624 323 aa13.96□□□□□ -0.17
CBX3-201ENST00000337620 TICAM1Q8IUC6 712 aa13.96□□□□□ -0.17
CBX3-201ENST00000337620 MCATQ8IVS2 390 aaKnown RBP13.96□□□□□ -0.17
CBX3-201ENST00000337620 CLECL1Q8IZS7 167 aa13.96□□□□□ -0.17
CBX3-201ENST00000337620 CSNK1A1LQ8N752 337 aa13.96□□□□□ -0.17
CBX3-201ENST00000337620 TMEM125Q96AQ2 219 aa13.96□□□□□ -0.17
CBX3-201ENST00000337620 PANX1Q96RD7 426 aa13.96□□□□□ -0.17
CBX3-201ENST00000337620 EPB41L1Q9H4G0 881 aa13.96□□□□□ -0.17
CBX3-201ENST00000337620 TEX10Q9NXF1 929 aaPredicted RBP13.96□□□□□ -0.17
CBX3-201ENST00000337620 ABCD2Q9UBJ2 740 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms