RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 NFAM1Q8NET5 270 aaPredicted RBP12.72□□□□□ -0.37
GTF3C6-201ENST00000329970 KIAA1191Q96A73 305 aa12.72□□□□□ -0.37
GTF3C6-201ENST00000329970 MS4A6EQ96DS6 147 aa12.72□□□□□ -0.37
GTF3C6-201ENST00000329970 SAYSD1Q9NPB0 183 aa12.72□□□□□ -0.37
GTF3C6-201ENST00000329970 TXNDC16Q9P2K2 825 aa12.72□□□□□ -0.37
GTF3C6-201ENST00000329970 LRIT2A6NDA9 550 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 TAPBPO15533 448 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 MAN1A2O60476 641 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 ZG16O60844 167 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 STK16O75716 305 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 UNC5CO95185 931 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 TBX6O95947 436 aaPredicted RBP12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 SP1P08047 785 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 CCDC166P0CW27 439 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 COL8A1P27658 744 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 EEF1DP29692 281 aaKnown RBP12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 HNRNPH1P31943 449 aaKnown RBP12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 GDF5P43026 501 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 HSD17B7P56937 341 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 RAB38P57729 211 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 MLF1P58340 268 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 GPX6P59796 221 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 PCDH1Q08174 1060 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 NAB1Q13506 487 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 SLBPQ14493 270 aaKnown RBP eCLIP12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 TBCCQ15814 346 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 GRTP1Q5TC63 336 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 C1QL3Q5VWW1 255 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 ZNF787Q6DD87 383 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 C3orf62Q6ZUJ4 267 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 GPSM1Q86YR5 675 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 TICAM1Q8IUC6 712 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 FAM98AQ8NCA5 519 aaKnown RBP12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 APCDD1LQ8NCL9 501 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 OR2L5Q8NG80 312 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 PTCD3Q96EY7 689 aaKnown RBP12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 FAR2Q96K12 515 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 GPR137Q96N19 417 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 FRMD6Q96NE9 622 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 QRFPRQ96P65 431 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 EFCAB11Q9BUY7 163 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 DPH5Q9H2P9 285 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 RHBGQ9H310 441 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 CDCP1Q9H5V8 836 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 NECTIN3Q9NQS3 549 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 DNAJC11Q9NVH1 559 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 WWOXQ9NZC7 414 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 SUCOQ9UBS9 1254 aaKnown RBP12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 PTBP2Q9UKA9 531 aaKnown RBP12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 ENTPD4Q9Y227 616 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 ZNF835Q9Y2P0 537 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 UTP11Q9Y3A2 253 aaKnown RBP12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 MYO9AB2RTY4 2548 aa12.71□□□□□ -0.37
GTF3C6-201ENST00000329970 CCDC189A1A4V9 331 aa12.7□□□□□ -0.38
GTF3C6-201ENST00000329970 ANKDD1BA6NHY2 528 aa12.7□□□□□ -0.38
GTF3C6-201ENST00000329970 CLGNO14967 610 aa12.7□□□□□ -0.38
GTF3C6-201ENST00000329970 ERI3O43414 337 aaKnown RBP12.7□□□□□ -0.38
GTF3C6-201ENST00000329970 MAOAP21397 527 aa12.7□□□□□ -0.38
GTF3C6-201ENST00000329970 TPP2P29144 1249 aaPredicted RBP12.7□□□□□ -0.38
GTF3C6-201ENST00000329970 SPRP35270 261 aaPredicted RBP12.7□□□□□ -0.38
GTF3C6-201ENST00000329970 HNF4AP41235 474 aa12.7□□□□□ -0.38
GTF3C6-201ENST00000329970 CASP2P42575 452 aa12.7□□□□□ -0.38
GTF3C6-201ENST00000329970 RAB10P61026 200 aa12.7□□□□□ -0.38
GTF3C6-201ENST00000329970 BTN3A2P78410 334 aa12.7□□□□□ -0.38
GTF3C6-201ENST00000329970 ART3Q13508 389 aa12.7□□□□□ -0.38
GTF3C6-201ENST00000329970 LAPTM5Q13571 262 aa12.7□□□□□ -0.38
GTF3C6-201ENST00000329970 RUNX2Q13950 521 aa12.7□□□□□ -0.38
GTF3C6-201ENST00000329970 C18orf21Q32NC0 220 aaPredicted RBP12.7□□□□□ -0.38
GTF3C6-201ENST00000329970 SPINK14Q6IE38 97 aa12.7□□□□□ -0.38
GTF3C6-201ENST00000329970 SLC25A25Q6KCM7 469 aa12.7□□□□□ -0.38
GTF3C6-201ENST00000329970 RPTNQ6XPR3 784 aa12.7□□□□□ -0.38
GTF3C6-201ENST00000329970 Q6ZPB1 254 aaPredicted RBP12.7□□□□□ -0.38
GTF3C6-201ENST00000329970 CAPN12Q6ZSI9 719 aa12.7□□□□□ -0.38
GTF3C6-201ENST00000329970 LRRC70Q7Z2Q7 622 aa12.7□□□□□ -0.38
GTF3C6-201ENST00000329970 ZNF572Q7Z3I7 529 aaPredicted RBP12.7□□□□□ -0.38
GTF3C6-201ENST00000329970 ZNF595Q8IYB9 648 aa12.7□□□□□ -0.38
GTF3C6-201ENST00000329970 B3GNT7Q8NFL0 401 aa12.7□□□□□ -0.38
GTF3C6-201ENST00000329970 SERINC2Q96SA4 455 aa12.7□□□□□ -0.38
GTF3C6-201ENST00000329970 REXO4Q9GZR2 422 aaKnown RBP12.7□□□□□ -0.38
GTF3C6-201ENST00000329970 RAB17Q9H0T7 212 aa12.7□□□□□ -0.38
GTF3C6-201ENST00000329970 CAB39LQ9H9S4 337 aa12.7□□□□□ -0.38
GTF3C6-201ENST00000329970 LRFN1Q9P244 771 aa12.7□□□□□ -0.38
GTF3C6-201ENST00000329970 MRPS33Q9Y291 106 aaKnown RBP12.7□□□□□ -0.38
GTF3C6-201ENST00000329970 CLDN16Q9Y5I7 305 aa12.7□□□□□ -0.38
GTF3C6-201ENST00000329970 KLF2Q9Y5W3 355 aaPredicted RBP12.7□□□□□ -0.38
GTF3C6-201ENST00000329970 PKDREJQ9NTG1 2253 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 EML6Q6ZMW3 1958 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 NCF1BA6NI72 391 aaPredicted RBP12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 NCF1CA8MVU1 366 aaPredicted RBP12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 CLDN4O14493 209 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 FCHO1O14526 889 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 PHGDHO43175 533 aaKnown RBP12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 B3GALT2O43825 422 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 NME2P1O60361 137 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 PRAMEF4O60810 478 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 PIAS1O75925 651 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 NCF1P14598 390 aaPredicted RBP12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 TFEBP19484 476 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 AGAP20933 346 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 NME2P22392 152 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms