RNA–Protein interactions for RNA: ENST00000328020.10

CMTM1-201, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-201ENST00000328020 ZNF282Q9UDV7 671 aaPredicted RBP13.36□□□□□ -0.27
CMTM1-201ENST00000328020 VTI1BQ9UEU0 232 aa13.36□□□□□ -0.27
CMTM1-201ENST00000328020 ZDHHC2Q9UIJ5 367 aa13.36□□□□□ -0.27
CMTM1-201ENST00000328020 HAO1Q9UJM8 370 aa13.36□□□□□ -0.27
CMTM1-201ENST00000328020 SGK494L7N484 410 aa13.35□□□□□ -0.27
CMTM1-201ENST00000328020 FOXS1O43638 330 aa13.35□□□□□ -0.27
CMTM1-201ENST00000328020 GUCY1B2O75343 617 aa13.35□□□□□ -0.27
CMTM1-201ENST00000328020 SH3BGRLO75368 114 aa13.35□□□□□ -0.27
CMTM1-201ENST00000328020 MYO1DO94832 1006 aa13.35□□□□□ -0.27
CMTM1-201ENST00000328020 TCN2P20062 427 aa13.35□□□□□ -0.27
CMTM1-201ENST00000328020 HIST1H1TP22492 207 aaPredicted RBP13.35□□□□□ -0.27
CMTM1-201ENST00000328020 SERPINB3P29508 390 aa13.35□□□□□ -0.27
CMTM1-201ENST00000328020 OR1D4P47884 311 aa13.35□□□□□ -0.27
CMTM1-201ENST00000328020 FOXA1P55317 472 aa13.35□□□□□ -0.27
CMTM1-201ENST00000328020 ACSM2AQ08AH3 577 aa13.35□□□□□ -0.27
CMTM1-201ENST00000328020 SLC9A5Q14940 896 aa13.35□□□□□ -0.27
CMTM1-201ENST00000328020 TCHHL1Q5QJ38 904 aaPredicted RBP13.35□□□□□ -0.27
CMTM1-201ENST00000328020 MLIPQ5VWP3 458 aa13.35□□□□□ -0.27
CMTM1-201ENST00000328020 ZNF385CQ66K41 422 aaPredicted RBP13.35□□□□□ -0.27
CMTM1-201ENST00000328020 ACSM2BQ68CK6 577 aa13.35□□□□□ -0.27
CMTM1-201ENST00000328020 CYP20A1Q6UW02 462 aa13.35□□□□□ -0.27
CMTM1-201ENST00000328020 ZNF517Q6ZMY9 492 aaPredicted RBP13.35□□□□□ -0.27
CMTM1-201ENST00000328020 LRRC69Q6ZNQ3 347 aa13.35□□□□□ -0.27
CMTM1-201ENST00000328020 TIPARPQ7Z3E1 657 aaKnown RBP13.35□□□□□ -0.27
CMTM1-201ENST00000328020 METTL27Q8N6F8 245 aaPredicted RBP13.35□□□□□ -0.27
CMTM1-201ENST00000328020 ZNF781Q8N8C0 355 aa13.35□□□□□ -0.27
CMTM1-201ENST00000328020 C7orf26Q96N11 449 aa13.35□□□□□ -0.27
CMTM1-201ENST00000328020 SLC26A1Q9H2B4 701 aa13.35□□□□□ -0.27
CMTM1-201ENST00000328020 WDR54Q9H977 334 aa13.35□□□□□ -0.27
CMTM1-201ENST00000328020 GPN2Q9H9Y4 310 aaPredicted RBP13.35□□□□□ -0.27
CMTM1-201ENST00000328020 C14orf105Q9NVL8 296 aa13.35□□□□□ -0.27
CMTM1-201ENST00000328020 MS4A12Q9NXJ0 267 aa13.35□□□□□ -0.27
CMTM1-201ENST00000328020 ADAM29Q9UKF5 820 aa13.35□□□□□ -0.27
CMTM1-201ENST00000328020 MRPS33Q9Y291 106 aaKnown RBP13.35□□□□□ -0.27
CMTM1-201ENST00000328020 MRPS2Q9Y399 296 aaKnown RBP13.35□□□□□ -0.27
CMTM1-201ENST00000328020 DNAJC15Q9Y5T4 150 aa13.35□□□□□ -0.27
CMTM1-201ENST00000328020 MAU2Q9Y6X3 613 aa13.35□□□□□ -0.27
CMTM1-201ENST00000328020 TEX51A0A1B0GUA7 166 aa13.34□□□□□ -0.27
CMTM1-201ENST00000328020 BLACEA4D250 179 aa13.34□□□□□ -0.27
CMTM1-201ENST00000328020 TRPC5OSA6NMA1 111 aa13.34□□□□□ -0.27
CMTM1-201ENST00000328020 SAP18O00422 153 aaKnown RBP13.34□□□□□ -0.27
CMTM1-201ENST00000328020 PLPP1O14494 284 aa13.34□□□□□ -0.27
CMTM1-201ENST00000328020 VPS4BO75351 444 aa13.34□□□□□ -0.27
CMTM1-201ENST00000328020 RDH16O75452 317 aa13.34□□□□□ -0.27
CMTM1-201ENST00000328020 RSL1D1O76021 490 aaKnown RBP13.34□□□□□ -0.27
CMTM1-201ENST00000328020 TBX6O95947 436 aaPredicted RBP13.34□□□□□ -0.27
CMTM1-201ENST00000328020 RNH1P13489 461 aaKnown RBP13.34□□□□□ -0.27
CMTM1-201ENST00000328020 JAK1P23458 1154 aa13.34□□□□□ -0.27
CMTM1-201ENST00000328020 ATP5A1P25705 553 aaKnown RBP13.34□□□□□ -0.27
CMTM1-201ENST00000328020 TLX1P31314 330 aaPredicted RBP13.34□□□□□ -0.27
CMTM1-201ENST00000328020 DLSTP36957 453 aa13.34□□□□□ -0.27
CMTM1-201ENST00000328020 OCRLQ01968 901 aa13.34□□□□□ -0.27
CMTM1-201ENST00000328020 DNASE1L3Q13609 305 aa13.34□□□□□ -0.27
CMTM1-201ENST00000328020 NCF4Q15080 339 aa13.34□□□□□ -0.27
CMTM1-201ENST00000328020 BROXQ5VW32 411 aa13.34□□□□□ -0.27
CMTM1-201ENST00000328020 RGS9BPQ6ZS82 235 aa13.34□□□□□ -0.27
CMTM1-201ENST00000328020 METTL4Q8N3J2 472 aa13.34□□□□□ -0.27
CMTM1-201ENST00000328020 ZCCHC7Q8N3Z6 543 aaKnown RBP13.34□□□□□ -0.27
CMTM1-201ENST00000328020 RNF175Q8N4F7 328 aa13.34□□□□□ -0.27
CMTM1-201ENST00000328020 ACOT4Q8N9L9 421 aa13.34□□□□□ -0.27
CMTM1-201ENST00000328020 C7orf57Q8NEG2 295 aa13.34□□□□□ -0.27
CMTM1-201ENST00000328020 OR51Q1Q8NH59 317 aa13.34□□□□□ -0.27
CMTM1-201ENST00000328020 CT55Q8WUE5 264 aa13.34□□□□□ -0.27
CMTM1-201ENST00000328020 VPS50Q96JG6 964 aa13.34□□□□□ -0.27
CMTM1-201ENST00000328020 PPP3R2Q96LZ3 170 aa13.34□□□□□ -0.27
CMTM1-201ENST00000328020 OR1F2PQ96R84 312 aa13.34□□□□□ -0.27
CMTM1-201ENST00000328020 HBEGFQ99075 208 aa13.34□□□□□ -0.27
CMTM1-201ENST00000328020 SORT1Q99523 831 aa13.34□□□□□ -0.27
CMTM1-201ENST00000328020 ACPTQ9BZG2 426 aa13.34□□□□□ -0.27
CMTM1-201ENST00000328020 DDX31Q9H8H2 851 aaKnown RBP13.34□□□□□ -0.27
CMTM1-201ENST00000328020 LYRM4Q9HD34 91 aa13.34□□□□□ -0.27
CMTM1-201ENST00000328020 PRDM7Q9NQW5 492 aa13.34□□□□□ -0.27
CMTM1-201ENST00000328020 LYARQ9NX58 379 aaKnown RBP13.34□□□□□ -0.27
CMTM1-201ENST00000328020 PHF11Q9UIL8 331 aa13.34□□□□□ -0.27
CMTM1-201ENST00000328020 CROTQ9UKG9 612 aa13.34□□□□□ -0.27
CMTM1-201ENST00000328020 FARSAQ9Y285 508 aaKnown RBP13.34□□□□□ -0.27
CMTM1-201ENST00000328020 FER1L5A0AVI2 2057 aa13.33□□□□□ -0.27
CMTM1-201ENST00000328020 A0A0G2JN53 185 aa13.33□□□□□ -0.28
CMTM1-201ENST00000328020 TMEM233B4DJY2 109 aa13.33□□□□□ -0.28
CMTM1-201ENST00000328020 PIP5K1BO14986 540 aa13.33□□□□□ -0.28
CMTM1-201ENST00000328020 HDAC3O15379 428 aa13.33□□□□□ -0.28
CMTM1-201ENST00000328020 KLK10O43240 276 aa13.33□□□□□ -0.28
CMTM1-201ENST00000328020 SCELO95171 688 aa13.33□□□□□ -0.28
CMTM1-201ENST00000328020 MED26O95402 600 aa13.33□□□□□ -0.28
CMTM1-201ENST00000328020 CYC1P08574 325 aa13.33□□□□□ -0.28
CMTM1-201ENST00000328020 LINC00032P0C843 101 aa13.33□□□□□ -0.28
CMTM1-201ENST00000328020 ATXN8OSP0DMR3 200 aa13.33□□□□□ -0.28
CMTM1-201ENST00000328020 MAPK1P28482 360 aa13.33□□□□□ -0.28
CMTM1-201ENST00000328020 ARRB2P32121 409 aa13.33□□□□□ -0.28
CMTM1-201ENST00000328020 GSTM5P46439 218 aa13.33□□□□□ -0.28
CMTM1-201ENST00000328020 HTR6P50406 440 aa13.33□□□□□ -0.28
CMTM1-201ENST00000328020 MC1RQ01726 317 aa13.33□□□□□ -0.28
CMTM1-201ENST00000328020 NR6A1Q15406 480 aa13.33□□□□□ -0.28
CMTM1-201ENST00000328020 UGT3A2Q3SY77 523 aa13.33□□□□□ -0.28
CMTM1-201ENST00000328020 CCNYL2Q5T2Q4 361 aa13.33□□□□□ -0.28
CMTM1-201ENST00000328020 CES4AQ5XG92 561 aa13.33□□□□□ -0.28
CMTM1-201ENST00000328020 FAM199XQ6PEV8 388 aaPredicted RBP13.33□□□□□ -0.28
CMTM1-201ENST00000328020 SCIMPQ6UWF3 145 aa13.33□□□□□ -0.28
CMTM1-201ENST00000328020 PRSS41Q7RTY9 318 aa13.33□□□□□ -0.28
CMTM1-201ENST00000328020 PDSS2Q86YH6 399 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms