RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 SOSTQ9BQB4 213 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 PPP1R3EQ9H7J1 279 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 STOML2Q9UJZ1 356 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 FBXO9Q9UK97 447 aaPredicted RBP12.27□□□□□ -0.45
CCDC60-201ENST00000327554 KCNE2Q9Y6J6 123 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 DNMT3AQ9Y6K1 912 aaPredicted RBP12.27□□□□□ -0.45
CCDC60-201ENST00000327554 AP1M2Q9Y6Q5 423 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 KCNE1BA0A087WTH5 132 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 FAM240BA0A1B0GVZ2 78 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 CIB4A0PJX0 185 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 PCDH17O14917 1159 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 LYRM1O43325 122 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 RFPL3O75679 317 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 SMPD1P17405 629 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 AMD1P17707 334 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 MAPK1P28482 360 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 WEE1P30291 646 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 PCGF2P35227 344 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 LIMS1P48059 325 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 ALDH6A1Q02252 535 aaKnown RBP12.27□□□□□ -0.45
CCDC60-201ENST00000327554 UPP1Q16831 310 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 NOXRED1Q6NXP6 359 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 MZT2BQ6NZ67 158 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 FAM122CQ6P4D5 195 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 STK40Q8N2I9 435 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 C1orf52Q8N6N3 182 aaKnown RBP12.27□□□□□ -0.45
CCDC60-201ENST00000327554 DTX3Q8N9I9 347 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 TMEM145Q8NBT3 493 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 FAM193BQ96PV7 902 aaPredicted RBP12.27□□□□□ -0.45
CCDC60-201ENST00000327554 GFM1Q96RP9 751 aaKnown RBP12.27□□□□□ -0.45
CCDC60-201ENST00000327554 EBPLQ9BY08 206 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 POLR2J2Q9GZM3 115 aaKnown RBP12.27□□□□□ -0.45
CCDC60-201ENST00000327554 B3GAT2Q9NPZ5 323 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 EVA1BQ9NVM1 165 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 TMCC3Q9ULS5 477 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 PCDHB1Q9Y5F3 818 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 SCN8AQ9UQD0 1980 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 A0A0D9SEW6 157 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 UPK3BL1B0FP48 263 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 ADM5C9JUS6 153 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 UPK3BL2E5RIL1 263 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 J3KTA2 159 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 INSIG1O15503 277 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 SLC2A2P11168 524 aaPredicted RBP12.26□□□□□ -0.45
CCDC60-201ENST00000327554 ACPPP15309 386 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 CR2P20023 1033 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 PRPS1L1P21108 318 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 CTAG1AP78358 180 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 SRSF11Q05519 484 aaKnown RBP12.26□□□□□ -0.45
CCDC60-201ENST00000327554 MLLT11Q13015 90 aaPredicted RBP12.26□□□□□ -0.45
CCDC60-201ENST00000327554 MRPL28Q13084 256 aaKnown RBP12.26□□□□□ -0.45
CCDC60-201ENST00000327554 NFE2L1Q14494 772 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 TRIQKQ629K1 86 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 C22orf42Q6IC83 251 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 ANKRD54Q6NXT1 300 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 METTL2BQ6P1Q9 378 aaKnown RBP12.26□□□□□ -0.45
CCDC60-201ENST00000327554 PAQR6Q6TCH4 344 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 KLHL17Q6TDP4 642 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 Q8N402 240 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 NANOGP1Q8N7R0 232 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 C19orf18Q8NEA5 215 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 TRPM4Q8TD43 1214 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 LPPQ93052 612 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 TOE1Q96GM8 510 aaKnown RBP12.26□□□□□ -0.45
CCDC60-201ENST00000327554 PSKH2Q96QS6 385 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 IL4I1Q96RQ9 567 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 MND1Q9BWT6 205 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 PPIL3Q9H2H8 161 aaKnown RBP12.26□□□□□ -0.45
CCDC60-201ENST00000327554 KCNN2Q9H2S1 579 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 SPNS1Q9H2V7 528 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 CRISPLD1Q9H336 500 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.26□□□□□ -0.45
CCDC60-201ENST00000327554 PCDH10Q9P2E7 1040 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 SMIM30A4D0T7 59 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 BTN3A3O00478 584 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 FABP7O15540 132 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 STK16O75716 305 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 RGS4P49798 205 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 CPT1AP50416 773 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 CRISP1P54107 249 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 EFEMP1Q12805 493 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 BOP1Q14137 746 aaKnown RBP12.26□□□□□ -0.45
CCDC60-201ENST00000327554 P2RY14Q15391 338 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 ZNF792Q3KQV3 632 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 IFI44LQ53G44 452 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 DGKKQ5KSL6 1271 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 MEDAGQ5VYS4 303 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 PTRHD1Q6GMV3 140 aaKnown RBP12.26□□□□□ -0.45
CCDC60-201ENST00000327554 FRMPD2BQ6IN97 320 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 DLK2Q6UY11 383 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 METTL23Q86XA0 190 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 OR8H3Q8N146 312 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 SLC37A3Q8NCC5 494 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 OR6J1Q8NGC5 347 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 OR9Q1Q8NGQ5 310 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 KLHL6Q8WZ60 621 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 AKAP1Q92667 903 aaKnown RBP eCLIP12.26□□□□□ -0.45
CCDC60-201ENST00000327554 B3GALT6Q96L58 329 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 SLC6A18Q96N87 628 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 ELOVL6Q9H5J4 265 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms