RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 OR10G6Q8NH81 332 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 CHTF18Q8WVB6 975 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 ZUFSPQ96AP4 578 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 RMND5BQ96G75 393 aaPredicted RBP12.18□□□□□ -0.46
DDX39A-202ENST00000324340 APIPQ96GX9 242 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 CNBD2Q96M20 576 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 SLC38A3Q99624 504 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 PSD2Q9BQI7 771 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 GPATCH1Q9BRR8 931 aaKnown RBP12.18□□□□□ -0.46
DDX39A-202ENST00000324340 C1orf50Q9BV19 199 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 DUSP23Q9BVJ7 150 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 RAB33BQ9H082 229 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 ZIM2Q9NZV7 527 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 POMT2Q9UKY4 750 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 EIF3LQ9Y262 564 aaKnown RBP12.18□□□□□ -0.46
DDX39A-202ENST00000324340 BDP1A6H8Y1 2624 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 CACNA1EQ15878 2313 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 ZDBF2Q9HCK1 2354 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 FEZF1A0PJY2 475 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 GSAPA4D1B5 854 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 ANKDD1BA6NHY2 528 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 ARHGAP33O14559 1287 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 HAT1O14929 419 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 OR1F1O43749 312 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 LCMT2O60294 686 aaKnown RBP12.18□□□□□ -0.46
DDX39A-202ENST00000324340 CLEC3AO75596 197 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 SULT1C4O75897 302 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 BCAS2O75934 225 aaPredicted RBP12.18□□□□□ -0.46
DDX39A-202ENST00000324340 UBXN7O94888 489 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 SEMA3DO95025 777 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 CER1O95813 267 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 SYPP08247 313 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 G6PDP11413 515 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 PRPS2P11908 318 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 CD1EP15812 388 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 GLB1P16278 677 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 PTX3P26022 381 aaPredicted RBP12.18□□□□□ -0.46
DDX39A-202ENST00000324340 MAPK1P28482 360 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 BCL6P41182 706 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 ZFP36L2P47974 494 aaKnown RBP12.18□□□□□ -0.46
DDX39A-202ENST00000324340 CCT8P50990 548 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 MAPRE2Q15555 327 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 ZIC1Q15915 447 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 SPIN4Q56A73 249 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 ZCCHC8Q6NZY4 707 aaKnown RBP12.18□□□□□ -0.46
DDX39A-202ENST00000324340 GALNT18Q6P9A2 607 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 CYP20A1Q6UW02 462 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 ZNF761Q86XN6 746 aaPredicted RBP12.18□□□□□ -0.46
DDX39A-202ENST00000324340 FUNDC1Q8IVP5 155 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 SLC35F3Q8IY50 421 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 TBC1D19Q8N5T2 526 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 FAM181AQ8N9Y4 354 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 MFSD9Q8NBP5 474 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 OR4C6Q8NH72 309 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 CREB3L4Q8TEY5 395 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 TSPEARQ8WU66 669 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 STARD8Q92502 1023 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 RSC1A1Q92681 617 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 MS4A8Q9BY19 250 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 ANKRD60Q9BZ19 345 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 ACTL8Q9H568 366 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 GAREM1Q9H706 876 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 IL21RQ9HBE5 538 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 FSCN3Q9NQT6 498 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 SELENONQ9NZV5 590 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 PILRAQ9UKJ1 303 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 RUVBL1Q9Y265 456 aaKnown RBP12.18□□□□□ -0.46
DDX39A-202ENST00000324340 POLR3HQ9Y535 204 aaPredicted RBP12.18□□□□□ -0.46
DDX39A-202ENST00000324340 AP1M2Q9Y6Q5 423 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 RNF215Q9Y6U7 377 aa12.18□□□□□ -0.46
DDX39A-202ENST00000324340 GON4LQ3T8J9 2241 aa12.17□□□□□ -0.46
DDX39A-202ENST00000324340 HEATR5BQ9P2D3 2071 aa12.17□□□□□ -0.46
DDX39A-202ENST00000324340 A0A0J9YY10 115 aa12.17□□□□□ -0.46
DDX39A-202ENST00000324340 RHPN2P1A8MT19 583 aa12.17□□□□□ -0.46
DDX39A-202ENST00000324340 PCDHGA12O60330 932 aa12.17□□□□□ -0.46
DDX39A-202ENST00000324340 NRP2O60462 931 aa12.17□□□□□ -0.46
DDX39A-202ENST00000324340 PROS1P07225 676 aa12.17□□□□□ -0.46
DDX39A-202ENST00000324340 PNLIPP16233 465 aa12.17□□□□□ -0.46
DDX39A-202ENST00000324340 MAGP20916 626 aa12.17□□□□□ -0.46
DDX39A-202ENST00000324340 JAK1P23458 1154 aa12.17□□□□□ -0.46
DDX39A-202ENST00000324340 DCKP27707 260 aa12.17□□□□□ -0.46
DDX39A-202ENST00000324340 MPLP40238 635 aa12.17□□□□□ -0.46
DDX39A-202ENST00000324340 GPR3P46089 330 aa12.17□□□□□ -0.46
DDX39A-202ENST00000324340 LSSP48449 732 aa12.17□□□□□ -0.46
DDX39A-202ENST00000324340 RPS15AP62244 130 aaKnown RBP12.17□□□□□ -0.46
DDX39A-202ENST00000324340 RPS6KA2Q15349 733 aa12.17□□□□□ -0.46
DDX39A-202ENST00000324340 AGKQ53H12 422 aa12.17□□□□□ -0.46
DDX39A-202ENST00000324340 CACHD1Q5VU97 1274 aa12.17□□□□□ -0.46
DDX39A-202ENST00000324340 FCRL6Q6DN72 434 aa12.17□□□□□ -0.46
DDX39A-202ENST00000324340 ARMC6Q6NXE6 501 aa12.17□□□□□ -0.46
DDX39A-202ENST00000324340 NOXRED1Q6NXP6 359 aa12.17□□□□□ -0.46
DDX39A-202ENST00000324340 ZC3H14Q6PJT7 736 aaKnown RBP12.17□□□□□ -0.46
DDX39A-202ENST00000324340 PAOXQ6QHF9 649 aa12.17□□□□□ -0.46
DDX39A-202ENST00000324340 BNC2Q6ZN30 1099 aaPredicted RBP12.17□□□□□ -0.46
DDX39A-202ENST00000324340 ADCK2Q7Z695 626 aa12.17□□□□□ -0.46
DDX39A-202ENST00000324340 SNX32Q86XE0 403 aa12.17□□□□□ -0.46
DDX39A-202ENST00000324340 HPS6Q86YV9 775 aa12.17□□□□□ -0.46
DDX39A-202ENST00000324340 FAM9CQ8IZT9 166 aa12.17□□□□□ -0.46
DDX39A-202ENST00000324340 PGAM4Q8N0Y7 254 aa12.17□□□□□ -0.46
DDX39A-202ENST00000324340 CENPSQ8N2Z9 138 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms