RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 GEMIN6Q8WXD5 167 aaKnown RBP13□□□□□ -0.33
RFFL-201ENST00000315249 PCDHAC1Q9H158 963 aa13□□□□□ -0.33
RFFL-201ENST00000315249 RPF2Q9H7B2 306 aaKnown RBP13□□□□□ -0.33
RFFL-201ENST00000315249 CLK4Q9HAZ1 481 aaKnown RBP13□□□□□ -0.33
RFFL-201ENST00000315249 STARD5Q9NSY2 213 aa13□□□□□ -0.33
RFFL-201ENST00000315249 PSAT1Q9Y617 370 aa13□□□□□ -0.33
RFFL-201ENST00000315249 NRAPQ86VF7 1730 aa13□□□□□ -0.33
RFFL-201ENST00000315249 RGS10O43665 173 aa13□□□□□ -0.33
RFFL-201ENST00000315249 HBQ1P09105 142 aa13□□□□□ -0.33
RFFL-201ENST00000315249 PRSS56P0CW18 603 aa13□□□□□ -0.33
RFFL-201ENST00000315249 HRH2P25021 359 aa13□□□□□ -0.33
RFFL-201ENST00000315249 CSNK1EP49674 416 aaKnown RBP13□□□□□ -0.33
RFFL-201ENST00000315249 ABCB9Q9NP78 766 aa13□□□□□ -0.33
RFFL-201ENST00000315249 ABCB10Q9NRK6 738 aa13□□□□□ -0.33
RFFL-201ENST00000315249 MARCH4Q9P2E8 410 aaPredicted RBP13□□□□□ -0.33
RFFL-201ENST00000315249 FETUBQ9UGM5 382 aa13□□□□□ -0.33
RFFL-201ENST00000315249 CA5BQ9Y2D0 317 aa13□□□□□ -0.33
RFFL-201ENST00000315249 TRBC2A0A5B9 178 aa13□□□□□ -0.33
RFFL-201ENST00000315249 ATF6P18850 670 aa13□□□□□ -0.33
RFFL-201ENST00000315249 MAP3K8P41279 467 aa13□□□□□ -0.33
RFFL-201ENST00000315249 SHC2P98077 582 aa13□□□□□ -0.33
RFFL-201ENST00000315249 PLEKHG4BQ96PX9 1271 aa13□□□□□ -0.33
RFFL-201ENST00000315249 TCF7L1Q9HCS4 588 aa13□□□□□ -0.33
RFFL-201ENST00000315249 PTRH2Q9Y3E5 179 aaKnown RBP13□□□□□ -0.33
RFFL-201ENST00000315249 ARF5P84085 180 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 ACY1Q03154 408 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 SYT16Q17RD7 645 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 PM20D1Q6GTS8 502 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 TMEM151BQ8IW70 566 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 DNAJB8Q8NHS0 232 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 SLC22A8Q8TCC7 542 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 TMEM234Q8WY98 164 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 REEP4Q9H6H4 257 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 S100A14Q9HCY8 104 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 A8MVJ9 347 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 M0QX08 132 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 H1F0P07305 194 aaKnown RBP12.99□□□□□ -0.33
RFFL-201ENST00000315249 OR12D1P0DN82 309 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 PSMA1P25786 263 aaKnown RBP12.99□□□□□ -0.33
RFFL-201ENST00000315249 FOLR3P41439 243 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 TXNL4AP83876 142 aaKnown RBP12.99□□□□□ -0.33
RFFL-201ENST00000315249 PLP2Q04941 152 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 SPANXN4Q5MJ08 99 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 HSDL2Q6YN16 418 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 RTL10Q7L3V2 364 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 ZNF100Q8IYN0 542 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 OR8K5Q8NH50 307 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 HPF1Q9NWY4 346 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 PCDHGB7Q9Y5F8 929 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 NPIPB15A6NHN6 443 aaPredicted RBP12.99□□□□□ -0.33
RFFL-201ENST00000315249 SLC30A4O14863 429 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 LRP8Q14114 963 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 ODF4Q2M2E3 257 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 C15orf39Q6ZRI6 1047 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 TMPPEQ6ZT21 453 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 USP30Q70CQ3 517 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 MAFAQ8NHW3 353 aaPredicted RBP12.99□□□□□ -0.33
RFFL-201ENST00000315249 RADILQ96JH8 1075 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 GRHPRQ9UBQ7 328 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 TOGARAM1Q9Y4F4 1720 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 CSTAP01040 98 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 CEP97Q8IW35 865 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 PLD6Q8N2A8 252 aaKnown RBP12.99□□□□□ -0.33
RFFL-201ENST00000315249 CBR4Q8N4T8 237 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 OR5L2Q8NGL0 311 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 TMCO6Q96DC7 493 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 ORAI3Q9BRQ5 295 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 G6PC3Q9BUM1 346 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 SSU72Q9NP77 194 aaKnown RBP12.99□□□□□ -0.33
RFFL-201ENST00000315249 IFT46Q9NQC8 304 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 CCL26Q9Y258 94 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 RTCAO00442 366 aaKnown RBP12.99□□□□□ -0.33
RFFL-201ENST00000315249 PBX2P40425 430 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 GPX6P59796 221 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 ABATP80404 500 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 MXD1Q05195 221 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 DMWDQ09019 674 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 FCHO2Q0JRZ9 810 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 IL18Q14116 193 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 ADGRD2Q7Z7M1 963 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 ZZZ3Q8IYH5 903 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 ZNF676Q8N7Q3 588 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 EDAQ92838 391 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 BRF2Q9HAW0 419 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 C15orf41Q9Y2V0 281 aa12.99□□□□□ -0.33
RFFL-201ENST00000315249 A0A1W2PRG6 482 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 MATN2O00339 956 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 PRKAR1AP10644 381 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 PIK3CBP42338 1070 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 ZNF678Q5SXM1 525 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 OR52B2Q96RD2 323 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 ZNF395Q9H8N7 513 aaPredicted RBP12.98□□□□□ -0.33
RFFL-201ENST00000315249 LRIT1Q9P2V4 623 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 A0A1B0GUL6 1792 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 RORAP35398 523 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 IRS1P35568 1242 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 IRF4Q15306 451 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 OR10G2Q8NGC3 310 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 CD180Q99467 661 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 CHID1Q9BWS9 393 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms