RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 PM20D1Q6GTS8 502 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 CYP4X1Q8N118 509 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 SLC5A11Q8WWX8 675 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 NKX1-2Q9UD57 310 aaPredicted RBP8.51□□□□□ -1.05
COL6A5-202ENST00000312481 KMOO15229 486 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 SLC16A6O15403 523 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 ETS2P15036 469 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 FIBCD1Q8N539 461 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 AHCYL2Q96HN2 611 aaKnown RBP8.51□□□□□ -1.05
COL6A5-202ENST00000312481 PDLIM7Q9NR12 457 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 CPNE7Q9UBL6 633 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 HCN2Q9UL51 889 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 POLHQ9Y253 713 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 A0A0U1RQJ8 604 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 NPIPA7E9PJI5 369 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 TSC22D2O75157 780 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 NPIPA8P0DM63 369 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 JUPP14923 745 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 POU3F3P20264 500 aaPredicted RBP8.51□□□□□ -1.05
COL6A5-202ENST00000312481 SRP54P61011 504 aaKnown RBP8.51□□□□□ -1.05
COL6A5-202ENST00000312481 EFR3AQ14156 821 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 PRAMEF14Q5SWL7 426 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 PRAMEF13Q5VWM6 474 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 FRRS1Q6ZNA5 592 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 FAM86B1Q8N7N1 296 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 PAPD5Q8NDF8 572 aaKnown RBP8.51□□□□□ -1.05
COL6A5-202ENST00000312481 HMCESQ96FZ2 354 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 HSH2DQ96JZ2 352 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 FAM83CQ9BQN1 747 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 FBXO8Q9NRD0 319 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 MRPS17Q9Y2R5 130 aaKnown RBP8.51□□□□□ -1.05
COL6A5-202ENST00000312481 A0A0U1RQF3 1178 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 A0A1W2PQH9 124 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 UPK3BL1B0FP48 263 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 UPK3BL2E5RIL1 263 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 CSF1P09603 554 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 ETFAP13804 333 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 MATN1P21941 496 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 FKBP2P26885 142 aaKnown RBP8.51□□□□□ -1.05
COL6A5-202ENST00000312481 TIA1P31483 386 aaKnown RBP eCLIP8.51□□□□□ -1.05
COL6A5-202ENST00000312481 CCNIQ14094 377 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 CLVS2Q5SYC1 327 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 FOXRED1Q96CU9 486 aaPredicted RBP8.51□□□□□ -1.05
COL6A5-202ENST00000312481 HECAQ9UBI9 543 aaPredicted RBP8.51□□□□□ -1.05
COL6A5-202ENST00000312481 SPEF1Q9Y4P9 236 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 SULT1B1O43704 296 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 CST3P01034 146 aaPredicted RBP8.51□□□□□ -1.05
COL6A5-202ENST00000312481 SLC35E2BP0CK96 405 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 RAP2BP61225 183 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 RALGDSQ12967 914 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 DSC3Q14574 896 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 OTUD1Q5VV17 481 aaPredicted RBP8.51□□□□□ -1.05
COL6A5-202ENST00000312481 SLC6A19Q695T7 634 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 FAM198BQ6UWH4 519 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 PQLC3Q8N755 202 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 SUV39H2Q9H5I1 410 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 TSPAN6O43657 245 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 PRLP01236 227 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 AHSGP02765 367 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 MT-ND1P03886 318 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 HLA-EP13747 358 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 IL1R2P27930 398 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 VIPR1P32241 457 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 TLR1Q15399 786 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 OR8J2Q8NGG1 315 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 UBTD2Q8WUN7 234 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 DPEP2Q9H4A9 486 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 PNMA8BQ9ULN7 279 aaPredicted RBP8.51□□□□□ -1.05
COL6A5-202ENST00000312481 FREM3P0C091 2139 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 A8MUI8 341 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 GPR25O00155 361 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 OXTRP30559 389 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 CRYZQ08257 329 aaKnown RBP8.51□□□□□ -1.05
COL6A5-202ENST00000312481 FAM83HQ6ZRV2 1179 aaPredicted RBP8.51□□□□□ -1.05
COL6A5-202ENST00000312481 VWA5B2Q8N398 1253 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 RASGEF1AQ8N9B8 481 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 CDCA5Q96FF9 252 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 FCRL4Q96PJ5 515 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 ALPK1Q96QP1 1244 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 CDADC1Q9BWV3 514 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 APOBEC3GQ9HC16 384 aaKnown RBP8.51□□□□□ -1.05
COL6A5-202ENST00000312481 SERINC1Q9NRX5 453 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 DZANK1Q9NVP4 752 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 ZDHHC2Q9UIJ5 367 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 BACE2Q9Y5Z0 518 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 ETV7Q9Y603 341 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 CEP250Q9BV73 2442 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 SDHDO14521 159 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 GIMD1P0DJR0 217 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 MCCD1P59942 119 aaPredicted RBP8.5□□□□□ -1.05
COL6A5-202ENST00000312481 SPHARQ15513 63 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 TMEM214Q6NUQ4 689 aaKnown RBP8.5□□□□□ -1.05
COL6A5-202ENST00000312481 PGM2L1Q6PCE3 622 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 TAC4Q86UU9 113 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 RNF113BQ8IZP6 322 aaKnown RBP8.5□□□□□ -1.05
COL6A5-202ENST00000312481 SMAP2Q8WU79 429 aaPredicted RBP8.5□□□□□ -1.05
COL6A5-202ENST00000312481 TSSK3Q96PN8 268 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 KLHL5Q96PQ7 755 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 C14orf166Q9Y224 244 aaKnown RBP8.5□□□□□ -1.05
COL6A5-202ENST00000312481 CELF2O95319 508 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms