RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 EPHA3P29320 983 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 GATMP50440 423 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 AP2S1P53680 142 aaPredicted RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 TUBB3Q13509 450 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 CBFBQ13951 182 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 PTPRRQ15256 657 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 TEAD2Q15562 447 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 SMAD1Q15797 465 aaKnown RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 TIGD2Q4W5G0 525 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 ABCA11PQ4W5N1 156 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 GPRC6AQ5T6X5 926 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 AGTRAPQ6RW13 159 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 LRRN1Q6UXK5 716 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 BAIAP2L2Q6UXY1 529 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 RNF111Q6ZNA4 994 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 SLC22A15Q8IZD6 547 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 TNFRSF25Q93038 417 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 BHLHE41Q9C0J9 482 aaPredicted RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 SLC40A1Q9NP59 571 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 ADAP2Q9NPF8 381 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 DNAJB9Q9UBS3 223 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 SCP2D1Q9UJQ7 156 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 PTBP2Q9UKA9 531 aaKnown RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 GVINP1Q7Z2Y8 2422 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 HEATR5BQ9P2D3 2071 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 ZNF840PA6NDX5 716 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 ZNF670-ZNF695F2Z2N8 137 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 TRMUO75648 421 aaKnown RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 ACTL6BO94805 426 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 METTL18O95568 372 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 ACRP10323 421 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 PORP16435 677 aaPredicted RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 ITPKAP23677 461 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 MAT2AP31153 395 aaKnown RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 RPS24P62847 133 aaKnown RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 BNIP1Q12981 228 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 SLBPQ14493 270 aaKnown RBP eCLIP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 TRAM2Q15035 370 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 KCNJ8Q15842 424 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 HNRNPA1L2Q32P51 320 aaKnown RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 RBM48Q5RL73 367 aaKnown RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 USP30Q70CQ3 517 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 ASPGQ86U10 573 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 TDHQ8IZJ6 230 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 GRPEL2Q8TAA5 225 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 SLC2A12Q8TD20 617 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 ASB9Q96DX5 294 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 C1GALT1C1Q96EU7 318 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 POLR3BQ9NW08 1133 aaPredicted RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 SDHAF2Q9NX18 166 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 MED11Q9P086 117 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 SIPA1L3O60292 1781 aaPredicted RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 ATRXP46100 2492 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 UBR3Q6ZT12 1888 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 LOC102725191A0A1B0GVB3 256 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 FAM240BA0A1B0GVZ2 78 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 MBLAC1A4D2B0 266 aaPredicted RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 SURF4O15260 269 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 HSPA12AO43301 675 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 S100A9P06702 114 aaKnown RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 LINC00032P0C843 101 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 FOLR3P41439 243 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 CSNK1DP48730 415 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 SEC13P55735 322 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 CSNK2A1P68400 391 aaPredicted RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 SLC7A9P82251 487 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 TLR1Q15399 786 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 COQ5Q5HYK3 327 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 GARNL3Q5VVW2 1013 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 PRSS55Q6UWB4 352 aaPredicted RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 TIFABQ6ZNK6 161 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 Q6ZVU0 165 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 CADM2Q8N3J6 435 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 KLHL36Q8N4N3 616 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 ZNF709Q8N972 641 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 ZNF382Q96SR6 550 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 MNTQ99583 582 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 COQ7Q99807 217 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 MYOCQ99972 504 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 URM1Q9BTM9 101 aaKnown RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 C12orf65Q9H3J6 166 aaKnown RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 NUFIP1Q9UHK0 495 aaKnown RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 NOCTQ9UK39 431 aaKnown RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 FCF1Q9Y324 198 aaKnown RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 POLR3HQ9Y535 204 aaPredicted RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 PEX16Q9Y5Y5 336 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 ANKRD31Q8N7Z5 1873 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 LOC100506127A0A0U1RQW1 187 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 TCRBV21S2A2A0A5A6 115 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 NPEPPSL1A6NEC2 478 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 SEC14L5O43304 696 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 EDF1O60869 148 aaKnown RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 HIST1H1TP22492 207 aaPredicted RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 UQCRC2P22695 453 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 CD38P28907 300 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 GDI2P50395 445 aaKnown RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 LIPEQ05469 1076 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 EIF3IQ13347 325 aaKnown RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 ESCO2Q56NI9 601 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 KCTD11Q693B1 232 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms