RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 TIPRLO75663 272 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 BMP2P12643 396 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 RPL5P46777 297 aaKnown RBP4.73□□□□□ -1.65
CAST-201ENST00000309190 NOVA1P51513 510 aaKnown RBP4.73□□□□□ -1.65
CAST-201ENST00000309190 RPS18P62269 152 aaKnown RBP4.73□□□□□ -1.65
CAST-201ENST00000309190 EIF2B5Q13144 721 aaKnown RBP4.73□□□□□ -1.65
CAST-201ENST00000309190 RPE65Q16518 533 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 SPDYE7PQ495Y7 208 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 RFTN2Q52LD8 501 aaPredicted RBP4.73□□□□□ -1.65
CAST-201ENST00000309190 PYCR3Q53H96 274 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 FRMPD2BQ6IN97 320 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 FAM217AQ8IXS0 508 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 NKAPQ8N5F7 415 aaKnown RBP4.73□□□□□ -1.65
CAST-201ENST00000309190 GATSQ8NAP1 163 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 ATP6V1C2Q8NEY4 427 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 SLC13A3Q8WWT9 602 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 PEX11GQ96HA9 241 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 NEURL2Q9BR09 285 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 C1QTNF2Q9BXJ5 285 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 KLHL31Q9H511 634 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 TRPV4Q9HBA0 871 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 MRPS30Q9NP92 439 aaKnown RBP4.73□□□□□ -1.65
CAST-201ENST00000309190 SLAMF8Q9P0V8 285 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 HEMK1Q9Y5R4 338 aaPredicted RBP4.73□□□□□ -1.65
CAST-201ENST00000309190 PLRG1O43660 514 aaKnown RBP4.73□□□□□ -1.65
CAST-201ENST00000309190 HTR1AP08908 422 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 ZCCHC18P0CG32 403 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 COL6A2P12110 1019 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 KELP23276 732 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 HNRNPKP61978 463 aaKnown RBP eCLIP4.73□□□□□ -1.65
CAST-201ENST00000309190 AP2B1P63010 937 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 STX5Q13190 355 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 NFATC4Q14934 902 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 TEAD4Q15561 434 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 ZXDCQ2QGD7 858 aaPredicted RBP4.73□□□□□ -1.65
CAST-201ENST00000309190 MUM1Q2TAK8 710 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 GPR33Q49SQ1 333 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 GTDC1Q4AE62 458 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 VWA2Q5GFL6 755 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 LHFPL2Q6ZUX7 228 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 GPR180Q86V85 440 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 GPR65Q8IYL9 337 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 NLGN4XQ8N0W4 816 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 OR9A4Q8NGU2 314 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 TWIST2Q8WVJ9 160 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 KAT2AQ92830 837 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 TMIGD2Q96BF3 282 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 FAR2Q96K12 515 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 COQ10AQ96MF6 247 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 TMEM74Q96NL1 305 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 ELF4Q99607 663 aaPredicted RBP4.73□□□□□ -1.65
CAST-201ENST00000309190 MRPL57Q9BQC6 102 aaKnown RBP4.73□□□□□ -1.65
CAST-201ENST00000309190 COPS7BQ9H9Q2 264 aaPredicted RBP4.73□□□□□ -1.65
CAST-201ENST00000309190 TCF7L2Q9NQB0 619 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 MIEF1Q9NQG6 463 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 TUBA8Q9NY65 449 aaPredicted RBP4.73□□□□□ -1.65
CAST-201ENST00000309190 NDUFA13Q9P0J0 144 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.73□□□□□ -1.65
CAST-201ENST00000309190 DOPEY2Q9Y3R5 2298 aa4.73□□□□□ -1.65
CAST-201ENST00000309190 AZIN1O14977 448 aa4.72□□□□□ -1.65
CAST-201ENST00000309190 COX4I1P13073 169 aa4.72□□□□□ -1.65
CAST-201ENST00000309190 XRCC1P18887 633 aaPredicted RBP4.72□□□□□ -1.65
CAST-201ENST00000309190 AOAHP28039 575 aa4.72□□□□□ -1.65
CAST-201ENST00000309190 POLR2IP36954 125 aaKnown RBP4.72□□□□□ -1.65
CAST-201ENST00000309190 STX1BP61266 288 aa4.72□□□□□ -1.65
CAST-201ENST00000309190 PRKCQQ04759 706 aa4.72□□□□□ -1.65
CAST-201ENST00000309190 KLF10Q13118 480 aa4.72□□□□□ -1.65
CAST-201ENST00000309190 MTA1Q13330 715 aa4.72□□□□□ -1.65
CAST-201ENST00000309190 ART3Q13508 389 aa4.72□□□□□ -1.65
CAST-201ENST00000309190 SLC36A3Q495N2 470 aa4.72□□□□□ -1.65
CAST-201ENST00000309190 C5orf22Q49AR2 442 aa4.72□□□□□ -1.65
CAST-201ENST00000309190 UNC50Q53HI1 259 aa4.72□□□□□ -1.65
CAST-201ENST00000309190 PRAMEF13Q5VWM6 474 aa4.72□□□□□ -1.65
CAST-201ENST00000309190 CAPN13Q6MZZ7 669 aaPredicted RBP4.72□□□□□ -1.65
CAST-201ENST00000309190 GALNT7Q86SF2 657 aa4.72□□□□□ -1.65
CAST-201ENST00000309190 ADAMTSL2Q86TH1 951 aa4.72□□□□□ -1.65
CAST-201ENST00000309190 SYT12Q8IV01 421 aa4.72□□□□□ -1.65
CAST-201ENST00000309190 ERI1Q8IV48 349 aaKnown RBP4.72□□□□□ -1.65
CAST-201ENST00000309190 UBALD2Q8IYN6 164 aa4.72□□□□□ -1.65
CAST-201ENST00000309190 SMYD1Q8NB12 490 aa4.72□□□□□ -1.65
CAST-201ENST00000309190 TP53I13Q8NBR0 393 aaPredicted RBP4.72□□□□□ -1.65
CAST-201ENST00000309190 ZNF548Q8NEK5 533 aaPredicted RBP4.72□□□□□ -1.65
CAST-201ENST00000309190 KCNJ9Q92806 393 aa4.72□□□□□ -1.65
CAST-201ENST00000309190 DNASE1L2Q92874 299 aa4.72□□□□□ -1.65
CAST-201ENST00000309190 RAB8BQ92930 207 aa4.72□□□□□ -1.65
CAST-201ENST00000309190 TP53INP1Q96A56 240 aa4.72□□□□□ -1.65
CAST-201ENST00000309190 CCDC74AQ96AQ1 378 aa4.72□□□□□ -1.65
CAST-201ENST00000309190 ASB9Q96DX5 294 aa4.72□□□□□ -1.65
CAST-201ENST00000309190 CEP295NLQ96MC4 621 aa4.72□□□□□ -1.65
CAST-201ENST00000309190 MCCC1Q96RQ3 725 aaPredicted RBP4.72□□□□□ -1.65
CAST-201ENST00000309190 CSF3RQ99062 836 aa4.72□□□□□ -1.65
CAST-201ENST00000309190 DUSP15Q9H1R2 295 aaPredicted RBP4.72□□□□□ -1.65
CAST-201ENST00000309190 MEAF6Q9HAF1 191 aa4.72□□□□□ -1.65
CAST-201ENST00000309190 ADAP2Q9NPF8 381 aa4.72□□□□□ -1.65
CAST-201ENST00000309190 USP22Q9UPT9 525 aa4.72□□□□□ -1.65
CAST-201ENST00000309190 HEATR5BQ9P2D3 2071 aa4.72□□□□□ -1.65
CAST-201ENST00000309190 FLNCQ14315 2725 aa4.72□□□□□ -1.65
CAST-201ENST00000309190 PLXNA2O75051 1894 aa4.72□□□□□ -1.65
CAST-201ENST00000309190 SPTY2D1-AS1A0A0U1RR47 76 aa4.72□□□□□ -1.65
CAST-201ENST00000309190 SH3PXD2BA1X283 911 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms