RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 TIMP2P16035 220 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 CD247P20963 164 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 SOX6P35712 828 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 PIGAP37287 484 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 ALDH3B2P48448 385 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 ERVFC1P60507 584 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 RPS26P62854 115 aaKnown RBP10.29□□□□□ -0.76
MUC4-201ENST00000308466 ZNF763Q0D2J5 394 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 MADCAM1Q13477 382 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 DHCR24Q15392 516 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 HMGN2P46Q86SG4 172 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 KRT73Q86Y46 540 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 GALNT12Q8IXK2 581 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 SPARTQ8N0X7 666 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 SLC34A3Q8N130 599 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 AMER2Q8N7J2 671 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 RASGEF1AQ8N9B8 481 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 OTUB1Q96FW1 271 aaPredicted RBP10.29□□□□□ -0.76
MUC4-201ENST00000308466 RDH12Q96NR8 316 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 TTYH2Q9BSA4 534 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 SLC2A11Q9BYW1 496 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 MOV10Q9HCE1 1003 aaKnown RBP10.29□□□□□ -0.76
MUC4-201ENST00000308466 CLN6Q9NWW5 311 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 KLHL20Q9Y2M5 609 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 GABRR3A8MPY1 467 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 H7BY64 318 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 ACOX3O15254 700 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 AP2A2O94973 939 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 WISP3O95389 354 aaPredicted RBP10.29□□□□□ -0.76
MUC4-201ENST00000308466 PRR35P0CG20 571 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 HOXB6P17509 224 aaKnown RBP10.29□□□□□ -0.76
MUC4-201ENST00000308466 MATN1P21941 496 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 TIA1P31483 386 aaKnown RBP eCLIP10.29□□□□□ -0.76
MUC4-201ENST00000308466 SMN1Q16637 294 aaKnown RBP10.29□□□□□ -0.76
MUC4-201ENST00000308466 KIAA1614Q5VZ46 1190 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 BPIFB1Q8TDL5 484 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 SLC5A11Q8WWX8 675 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 PRAP1Q96NZ9 151 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 TEX12Q9BXU0 123 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 BEX2Q9BXY8 128 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 C11orf16Q9NQ32 467 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 H2AFY2Q9P0M6 372 aaPredicted RBP10.29□□□□□ -0.76
MUC4-201ENST00000308466 HS3ST2Q9Y278 367 aa10.29□□□□□ -0.76
MUC4-201ENST00000308466 TCRBV5S2A0A599 114 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 TRBC2A0A5B9 178 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 SLC31A1O15431 190 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 FGF19O95750 216 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 ALPPL2P10696 532 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 CD9P21926 228 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 RACK1P63244 317 aaKnown RBP10.28□□□□□ -0.76
MUC4-201ENST00000308466 ZNF267Q14586 743 aaPredicted RBP10.28□□□□□ -0.76
MUC4-201ENST00000308466 CEACAM20Q6UY09 585 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 PLEKHM3Q6ZWE6 761 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 GPR149Q86SP6 731 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 PHC2Q8IXK0 858 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 CHCHD4Q8N4Q1 142 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 DUS3LQ96G46 650 aaKnown RBP10.28□□□□□ -0.76
MUC4-201ENST00000308466 FEVQ99581 238 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 REEP4Q9H6H4 257 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 TRIM45Q9H8W5 580 aaPredicted RBP10.28□□□□□ -0.76
MUC4-201ENST00000308466 TMEM9Q9P0T7 183 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 C5AR2Q9P296 337 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 GRXCR2A6NFK2 248 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 GLOD5A6NK44 160 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 KMOO15229 486 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 SLC16A5O15375 505 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 CLPXO76031 633 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 HPRP00739 348 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 BCHEP06276 602 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 C1GALT1C1LP0DN25 315 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 CRHBPP24387 322 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 CSNK1DP48730 415 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 CDK5R2Q13319 367 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 C9orf64Q5T6V5 341 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 LIPIQ6XZB0 460 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 TRIM48Q8IWZ4 208 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 CHDHQ8NE62 594 aaPredicted RBP10.28□□□□□ -0.76
MUC4-201ENST00000308466 WDR36Q8NI36 951 aaKnown RBP10.28□□□□□ -0.76
MUC4-201ENST00000308466 C12orf66Q96MD2 445 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 COL21A1Q96P44 957 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 SLC35C2Q9NQQ7 365 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 SLC6A13Q9NSD5 602 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 PAQR5Q9NXK6 330 aaPredicted RBP10.28□□□□□ -0.76
MUC4-201ENST00000308466 ENTPD4Q9Y227 616 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 OR51B4Q9Y5P0 310 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 TBC1D3DA0A087WVF3 549 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 TBC1D3IA0A087WXS9 549 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 TBC1D3EA0A087X179 549 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 TBC1D3KA0A087X1G2 549 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 TBC1D3FA6NER0 549 aaPredicted RBP10.28□□□□□ -0.76
MUC4-201ENST00000308466 EFCAB9A8MZ26 197 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 TBC1D3LB9A6J9 549 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 MTRF1O75570 445 aaKnown RBP10.28□□□□□ -0.76
MUC4-201ENST00000308466 MED26O95402 600 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 PAK4O96013 591 aaPredicted RBP10.28□□□□□ -0.76
MUC4-201ENST00000308466 TBC1D3HP0C7X1 549 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 OPRL1P41146 370 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 IL12RB1P42701 662 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 DEFA1P59665 94 aa10.28□□□□□ -0.76
MUC4-201ENST00000308466 DEFA3P59666 94 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms