RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 MRPL28Q13084 256 aaKnown RBP15.59■□□□□ 0.09
CCDC8-201ENST00000307522 GALEQ14376 348 aa15.59■□□□□ 0.09
CCDC8-201ENST00000307522 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.59■□□□□ 0.09
CCDC8-201ENST00000307522 C5orf22Q49AR2 442 aa15.59■□□□□ 0.09
CCDC8-201ENST00000307522 FRMPD2BQ6IN97 320 aa15.59■□□□□ 0.09
CCDC8-201ENST00000307522 SUSD1Q6UWL2 747 aa15.59■□□□□ 0.09
CCDC8-201ENST00000307522 ZNF366Q8N895 744 aa15.59■□□□□ 0.09
CCDC8-201ENST00000307522 SYT14Q8NB59 555 aa15.59■□□□□ 0.09
CCDC8-201ENST00000307522 IMP4Q96G21 291 aaKnown RBP15.59■□□□□ 0.09
CCDC8-201ENST00000307522 PCDHB9Q9Y5E1 797 aa15.59■□□□□ 0.09
CCDC8-201ENST00000307522 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.58■□□□□ 0.09
CCDC8-201ENST00000307522 PRR23AA6NEV1 266 aa15.58■□□□□ 0.09
CCDC8-201ENST00000307522 HNRNPCL2B2RXH8 293 aa15.58■□□□□ 0.09
CCDC8-201ENST00000307522 TOXO94900 526 aa15.58■□□□□ 0.09
CCDC8-201ENST00000307522 ALAS2P22557 587 aa15.58■□□□□ 0.09
CCDC8-201ENST00000307522 ZNF177Q13360 481 aaPredicted RBP15.58■□□□□ 0.09
CCDC8-201ENST00000307522 TBCEQ15813 527 aaPredicted RBP15.58■□□□□ 0.09
CCDC8-201ENST00000307522 WSCD2Q2TBF2 565 aa15.58■□□□□ 0.09
CCDC8-201ENST00000307522 ARSKQ6UWY0 536 aa15.58■□□□□ 0.09
CCDC8-201ENST00000307522 SLC34A3Q8N130 599 aa15.58■□□□□ 0.09
CCDC8-201ENST00000307522 MYDGFQ969H8 173 aa15.58■□□□□ 0.09
CCDC8-201ENST00000307522 TESCQ96BS2 214 aa15.58■□□□□ 0.09
CCDC8-201ENST00000307522 UPRTQ96BW1 309 aa15.58■□□□□ 0.09
CCDC8-201ENST00000307522 TSGA13Q96PP4 275 aa15.58■□□□□ 0.09
CCDC8-201ENST00000307522 SIGLEC11Q96RL6 698 aa15.58■□□□□ 0.09
CCDC8-201ENST00000307522 ZBTB18Q99592 522 aa15.58■□□□□ 0.09
CCDC8-201ENST00000307522 TMEM248Q9NWD8 314 aa15.58■□□□□ 0.09
CCDC8-201ENST00000307522 IMPAD1Q9NX62 359 aa15.58■□□□□ 0.09
CCDC8-201ENST00000307522 EIF3KQ9UBQ5 218 aaKnown RBP15.58■□□□□ 0.09
CCDC8-201ENST00000307522 ZNF222Q9UK12 451 aa15.58■□□□□ 0.09
CCDC8-201ENST00000307522 NUP50Q9UKX7 468 aa15.58■□□□□ 0.09
CCDC8-201ENST00000307522 DUSP12Q9UNI6 340 aa15.58■□□□□ 0.09
CCDC8-201ENST00000307522 GREB1Q4ZG55 1949 aa15.58■□□□□ 0.09
CCDC8-201ENST00000307522 STX7O15400 261 aaKnown RBP15.58■□□□□ 0.08
CCDC8-201ENST00000307522 VPS4BO75351 444 aa15.58■□□□□ 0.08
CCDC8-201ENST00000307522 SERPINI2O75830 405 aa15.58■□□□□ 0.08
CCDC8-201ENST00000307522 CXCR4P61073 352 aa15.58■□□□□ 0.08
CCDC8-201ENST00000307522 RPA4Q13156 261 aa15.58■□□□□ 0.08
CCDC8-201ENST00000307522 TIGD7Q6NT04 549 aaPredicted RBP15.58■□□□□ 0.08
CCDC8-201ENST00000307522 ANKRD54Q6NXT1 300 aa15.58■□□□□ 0.08
CCDC8-201ENST00000307522 UMODL1-AS1Q8N2C9 162 aa15.58■□□□□ 0.08
CCDC8-201ENST00000307522 SLC37A3Q8NCC5 494 aa15.58■□□□□ 0.08
CCDC8-201ENST00000307522 OR8J3Q8NGG0 315 aa15.58■□□□□ 0.08
CCDC8-201ENST00000307522 OR56A4Q8NGH8 313 aa15.58■□□□□ 0.08
CCDC8-201ENST00000307522 OR9Q1Q8NGQ5 310 aa15.58■□□□□ 0.08
CCDC8-201ENST00000307522 CEP76Q8TAP6 659 aa15.58■□□□□ 0.08
CCDC8-201ENST00000307522 IPCEF1Q8WWN9 437 aaPredicted RBP15.58■□□□□ 0.08
CCDC8-201ENST00000307522 TRIM43Q96BQ3 446 aaPredicted RBP15.58■□□□□ 0.08
CCDC8-201ENST00000307522 FAM240BA0A1B0GVZ2 78 aa15.58■□□□□ 0.08
CCDC8-201ENST00000307522 INPPL1O15357 1258 aa15.58■□□□□ 0.08
CCDC8-201ENST00000307522 KERAO60938 352 aa15.58■□□□□ 0.08
CCDC8-201ENST00000307522 SLC22A5O76082 557 aa15.58■□□□□ 0.08
CCDC8-201ENST00000307522 FABP3P05413 133 aa15.58■□□□□ 0.08
CCDC8-201ENST00000307522 NUDT7P0C024 238 aa15.58■□□□□ 0.08
CCDC8-201ENST00000307522 SLC11A2P49281 568 aa15.58■□□□□ 0.08
CCDC8-201ENST00000307522 STK19P49842 368 aaPredicted RBP15.58■□□□□ 0.08
CCDC8-201ENST00000307522 NTHL1P78549 312 aa15.58■□□□□ 0.08
CCDC8-201ENST00000307522 RUNX1T1Q06455 604 aa15.58■□□□□ 0.08
CCDC8-201ENST00000307522 P2RY14Q15391 338 aa15.58■□□□□ 0.08
CCDC8-201ENST00000307522 LIPKQ5VXJ0 399 aa15.58■□□□□ 0.08
CCDC8-201ENST00000307522 APCDD1Q8J025 514 aa15.58■□□□□ 0.08
CCDC8-201ENST00000307522 OR9Q2Q8NGE9 314 aa15.58■□□□□ 0.08
CCDC8-201ENST00000307522 ZNF461Q8TAF7 563 aa15.58■□□□□ 0.08
CCDC8-201ENST00000307522 TMEM80Q96HE8 168 aa15.58■□□□□ 0.08
CCDC8-201ENST00000307522 NIPSNAP1Q9BPW8 284 aa15.58■□□□□ 0.08
CCDC8-201ENST00000307522 MTG2Q9H4K7 406 aa15.58■□□□□ 0.08
CCDC8-201ENST00000307522 LCHNA4D1U4 455 aa15.57■□□□□ 0.08
CCDC8-201ENST00000307522 FAM227AF5H4B4 570 aa15.57■□□□□ 0.08
CCDC8-201ENST00000307522 RPS17P08708 135 aaKnown RBP15.57■□□□□ 0.08
CCDC8-201ENST00000307522 HOXD9P28356 352 aaPredicted RBP15.57■□□□□ 0.08
CCDC8-201ENST00000307522 DNAJA1P31689 397 aaKnown RBP15.57■□□□□ 0.08
CCDC8-201ENST00000307522 HSPA7P48741 367 aa15.57■□□□□ 0.08
CCDC8-201ENST00000307522 PRIM2P49643 509 aa15.57■□□□□ 0.08
CCDC8-201ENST00000307522 MAP2K6P52564 334 aa15.57■□□□□ 0.08
CCDC8-201ENST00000307522 PTPRNQ16849 979 aa15.57■□□□□ 0.08
CCDC8-201ENST00000307522 MPPE1Q53F39 396 aa15.57■□□□□ 0.08
CCDC8-201ENST00000307522 TYW3Q6IPR3 259 aaKnown RBP15.57■□□□□ 0.08
CCDC8-201ENST00000307522 POLR1EQ9GZS1 481 aaKnown RBP15.57■□□□□ 0.08
CCDC8-201ENST00000307522 LINC00597Q9H2U6 94 aa15.57■□□□□ 0.08
CCDC8-201ENST00000307522 CCL26Q9Y258 94 aa15.57■□□□□ 0.08
CCDC8-201ENST00000307522 LINC01387J3KSC0 135 aa15.57■□□□□ 0.08
CCDC8-201ENST00000307522 URODP06132 367 aa15.57■□□□□ 0.08
CCDC8-201ENST00000307522 MYOGP15173 224 aa15.57■□□□□ 0.08
CCDC8-201ENST00000307522 RPL6Q02878 288 aaKnown RBP15.57■□□□□ 0.08
CCDC8-201ENST00000307522 PLPP4Q5VZY2 271 aa15.57■□□□□ 0.08
CCDC8-201ENST00000307522 GPR65Q8IYL9 337 aa15.57■□□□□ 0.08
CCDC8-201ENST00000307522 RNF175Q8N4F7 328 aa15.57■□□□□ 0.08
CCDC8-201ENST00000307522 SLC5A8Q8N695 610 aa15.57■□□□□ 0.08
CCDC8-201ENST00000307522 TSPEARQ8WU66 669 aa15.57■□□□□ 0.08
CCDC8-201ENST00000307522 ING5Q8WYH8 240 aa15.57■□□□□ 0.08
CCDC8-201ENST00000307522 LINGO1Q96FE5 620 aa15.57■□□□□ 0.08
CCDC8-201ENST00000307522 SMAD5Q99717 465 aaKnown RBP15.57■□□□□ 0.08
CCDC8-201ENST00000307522 TRIM62Q9BVG3 475 aa15.57■□□□□ 0.08
CCDC8-201ENST00000307522 MGAT4AQ9UM21 535 aa15.57■□□□□ 0.08
CCDC8-201ENST00000307522 HCFC2Q9Y5Z7 792 aa15.57■□□□□ 0.08
CCDC8-201ENST00000307522 KCNE2Q9Y6J6 123 aa15.57■□□□□ 0.08
CCDC8-201ENST00000307522 NLRC5Q86WI3 1866 aa15.57■□□□□ 0.08
CCDC8-201ENST00000307522 H7C4K7 107 aa15.56■□□□□ 0.08
CCDC8-201ENST00000307522 TMEM189-UBE2V1I3L0A0 370 aa15.56■□□□□ 0.08
CCDC8-201ENST00000307522 E2F3O00716 465 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms