RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 SDSLQ96GA7 329 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 POU2F3Q9UKI9 436 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 MYO5BQ9ULV0 1848 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 HOXB8P17481 243 aaPredicted RBP12.22□□□□□ -0.45
USP38-201ENST00000307017 GLDCP23378 1020 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 AQP2P41181 271 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 HNRNPKP61978 463 aaKnown RBP eCLIP12.22□□□□□ -0.45
USP38-201ENST00000307017 RASGEF1BQ0VAM2 473 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 ALG10Q5BKT4 473 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 DDX1Q92499 740 aaKnown RBP12.22□□□□□ -0.45
USP38-201ENST00000307017 NDC1Q9BTX1 674 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 MOV10Q9HCE1 1003 aaKnown RBP12.22□□□□□ -0.45
USP38-201ENST00000307017 HCN3Q9P1Z3 774 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 NOX1Q9Y5S8 564 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 WNT6Q9Y6F9 365 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 AIF1P55008 147 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 SGCAQ16586 387 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 KLBQ86Z14 1044 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 OR51A7Q8NH64 312 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 SLC16A5O15375 505 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 ARAFP10398 606 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 DIO3P55073 304 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 S100A12P80511 92 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 EXOC3L2Q2M3D2 409 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 REM2Q8IYK8 340 aaPredicted RBP12.22□□□□□ -0.45
USP38-201ENST00000307017 LINC00471Q8N535 108 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 NLGN2Q8NFZ4 835 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 SH3RF2Q8TEC5 729 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 SNX27Q96L92 541 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 DLC1Q96QB1 1528 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 ZNF347Q96SE7 839 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 IL12RB2Q99665 862 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 CGREF1Q99674 301 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 SIX2Q9NPC8 291 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 ASF1BQ9NVP2 202 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 NCDNQ9UBB6 729 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 MUSKO15146 869 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 CASC3O15234 703 aaKnown RBP12.22□□□□□ -0.45
USP38-201ENST00000307017 IFNA21P01568 189 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 HTR1AP08908 422 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 CELP19835 753 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 IMPDH1P20839 514 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 ERVK-8P63133 956 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 DUOXA1Q1HG43 343 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 SLC10A6Q3KNW5 377 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 SHQ1Q6PI26 577 aaKnown RBP12.22□□□□□ -0.45
USP38-201ENST00000307017 METTL3Q86U44 580 aaKnown RBP12.22□□□□□ -0.45
USP38-201ENST00000307017 SERPINA12Q8IW75 414 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 ITGB1BP2Q9UKP3 347 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 SLC22A1O15245 554 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 FMO6PO60774 539 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 STSP08842 583 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 GNB3P16520 340 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 POLR2CP19387 275 aaPredicted RBP12.21□□□□□ -0.45
USP38-201ENST00000307017 LUMP51884 338 aaPredicted RBP12.21□□□□□ -0.45
USP38-201ENST00000307017 NKPD1Q17RQ9 610 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 PRAMEF14Q5SWL7 426 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 HES5Q5TA89 166 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 PRAMEF13Q5VWM6 474 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 LRRC66Q68CR7 880 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 PNLDC1Q8NA58 520 aaKnown RBP12.21□□□□□ -0.45
USP38-201ENST00000307017 C3orf58Q8NDZ4 430 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 FCAMRQ8WWV6 532 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 SECISBP2Q96T21 854 aaKnown RBP12.21□□□□□ -0.45
USP38-201ENST00000307017 RANBP3Q9H6Z4 567 aaPredicted RBP12.21□□□□□ -0.45
USP38-201ENST00000307017 TUBG2Q9NRH3 451 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 MRPL22Q9NWU5 206 aaKnown RBP12.21□□□□□ -0.45
USP38-201ENST00000307017 TAS2R10Q9NYW0 307 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 DISC1C4P0D8 188 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 TGM4P49221 684 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 DHPSP49366 369 aaPredicted RBP12.21□□□□□ -0.45
USP38-201ENST00000307017 OAZ1P54368 228 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 GAS6Q14393 721 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 TSNAXQ99598 290 aaKnown RBP12.21□□□□□ -0.45
USP38-201ENST00000307017 NSUN3Q9H649 340 aaKnown RBP12.21□□□□□ -0.45
USP38-201ENST00000307017 METTL7AQ9H8H3 244 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 ZDHHC18Q9NUE0 388 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 H0Y8G0 127 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 CD2P06729 351 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 MAPK8P45983 427 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 NCS1P62166 190 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 RHEBQ15382 184 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 VMACQ2NL98 169 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 CYBRD1Q53TN4 286 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 WDR53Q7Z5U6 358 aaPredicted RBP12.21□□□□□ -0.45
USP38-201ENST00000307017 CCDC71Q8IV32 467 aaPredicted RBP12.21□□□□□ -0.45
USP38-201ENST00000307017 STK35Q8TDR2 534 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 FCRL3Q96P31 734 aaPredicted RBP12.21□□□□□ -0.45
USP38-201ENST00000307017 HINT2Q9BX68 163 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 HSD3B7Q9H2F3 369 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 GPATCH2Q9NW75 528 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 SLIT1O75093 1534 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 CLCA1A8K7I4 914 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 SLC6A4P31645 630 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 DAOAP59103 153 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 RAB6CQ53S08 254 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 MAELQ96JY0 434 aaKnown RBP12.21□□□□□ -0.45
USP38-201ENST00000307017 PEBP4Q96S96 227 aa12.21□□□□□ -0.45
USP38-201ENST00000307017 RAB6CQ9H0N0 254 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms