RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 SDK1Q7Z5N4 2213 aa13.84□□□□□ -0.19
SHCBP1-201ENST00000303383 YY2O15391 372 aa13.84□□□□□ -0.19
SHCBP1-201ENST00000303383 DEAF1O75398 565 aaPredicted RBP13.84□□□□□ -0.19
SHCBP1-201ENST00000303383 SERPINA1P01009 418 aa13.84□□□□□ -0.19
SHCBP1-201ENST00000303383 DDCP20711 480 aa13.84□□□□□ -0.19
SHCBP1-201ENST00000303383 CD27P26842 260 aa13.84□□□□□ -0.19
SHCBP1-201ENST00000303383 CD38P28907 300 aa13.84□□□□□ -0.19
SHCBP1-201ENST00000303383 MANFP55145 182 aaKnown RBP13.84□□□□□ -0.19
SHCBP1-201ENST00000303383 FOLH1Q04609 750 aa13.84□□□□□ -0.19
SHCBP1-201ENST00000303383 SLC9A5Q14940 896 aa13.84□□□□□ -0.19
SHCBP1-201ENST00000303383 FXNQ16595 210 aa13.84□□□□□ -0.19
SHCBP1-201ENST00000303383 TRIM73Q86UV7 250 aa13.84□□□□□ -0.19
SHCBP1-201ENST00000303383 DCP2Q8IU60 420 aaKnown RBP13.84□□□□□ -0.19
SHCBP1-201ENST00000303383 ADGRF3Q8IZF5 1079 aa13.84□□□□□ -0.19
SHCBP1-201ENST00000303383 CLEC4FQ8N1N0 589 aa13.84□□□□□ -0.19
SHCBP1-201ENST00000303383 N4BP2L2Q92802 583 aaPredicted RBP13.84□□□□□ -0.19
SHCBP1-201ENST00000303383 SLC47A1Q96FL8 570 aa13.84□□□□□ -0.19
SHCBP1-201ENST00000303383 SLC35A5Q9BS91 424 aa13.84□□□□□ -0.19
SHCBP1-201ENST00000303383 SLC6A16Q9GZN6 736 aa13.84□□□□□ -0.19
SHCBP1-201ENST00000303383 FANCMQ8IYD8 2048 aa13.84□□□□□ -0.19
SHCBP1-201ENST00000303383 LRIT2A6NDA9 550 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 PDPK1O15530 556 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 PRICKLE3O43900 615 aaPredicted RBP13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 GUCY1B2O75343 617 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 CKMT2P17540 419 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 PRIM2P49643 509 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 RGS19P49795 217 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 RPS15AP62244 130 aaKnown RBP13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 HBA1P69905 142 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 SPDYE7PQ495Y7 208 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 TLDC1Q6P9B6 456 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 OOSP2Q86WS3 158 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 SPEM1Q8N4L4 309 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.83□□□□□ -0.24e-6■■■□□ 17.2
SHCBP1-201ENST00000303383 KCNC2Q96PR1 638 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 C9orf16Q9BUW7 83 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 CAAP1Q9H8G2 361 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 TAS2R9Q9NYW1 312 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 ACTR10Q9NZ32 417 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 ADAM29Q9UKF5 820 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 FAF1Q9UNN5 650 aaPredicted RBP13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 AP1M2Q9Y6Q5 423 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 TPD52L2O43399 206 aaKnown RBP13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 ZNF23P17027 643 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 MAGP20916 626 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 HMBOX1Q6NT76 420 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 SLC37A2Q8TED4 501 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 ZDHHC1Q8WTX9 485 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 POP5Q969H6 163 aaKnown RBP13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 SDCCAG3Q96C92 435 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 TM4SF18Q96CE8 201 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 NLNQ9BYT8 704 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 HRASLS2Q9NWW9 162 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 EXO1Q9UQ84 846 aaKnown RBP13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 A6NCN8 305 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 METTL12A8MUP2 240 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 C2orf74A8MZ97 194 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 CELA2BP08218 269 aaPredicted RBP13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 SLC35G6P0C7Q6 338 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 ZCCHC18P0CG32 403 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 BMP2P12643 396 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 RAB8AP61006 207 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 SLC14A1Q13336 389 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 PDE7AQ13946 482 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 VMACQ2NL98 169 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 FAM180BQ6P0A1 224 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 SZRD1Q7Z422 152 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 CALHM3Q86XJ0 350 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 MMP21Q8N119 569 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 NATD1Q8N6N6 113 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 MFSD9Q8NBP5 474 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 CREB3L4Q8TEY5 395 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 ZFPM2Q8WW38 1151 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 GUCD1Q96NT3 240 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 KLHL25Q9H0H3 589 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 AGPAT4Q9NRZ5 378 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 RAPGEFL1Q9UHV5 662 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 KLF15Q9UIH9 416 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 BAG5Q9UL15 447 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 PCDHGA4Q9Y5G9 962 aa13.83□□□□□ -0.2
SHCBP1-201ENST00000303383 PRKD3O94806 890 aa13.82□□□□□ -0.2
SHCBP1-201ENST00000303383 RETP07949 1114 aa13.82□□□□□ -0.2
SHCBP1-201ENST00000303383 UBTFL6P0CB48 400 aaPredicted RBP13.82□□□□□ -0.2
SHCBP1-201ENST00000303383 HOXB3P14651 431 aaPredicted RBP13.82□□□□□ -0.2
SHCBP1-201ENST00000303383 GPX2P18283 190 aa13.82□□□□□ -0.2
SHCBP1-201ENST00000303383 GSTM5P46439 218 aa13.82□□□□□ -0.2
SHCBP1-201ENST00000303383 HHEXQ03014 270 aa13.82□□□□□ -0.2
SHCBP1-201ENST00000303383 VAC14Q08AM6 782 aa13.82□□□□□ -0.2
SHCBP1-201ENST00000303383 ZNF687Q8N1G0 1237 aa13.82□□□□□ -0.2
SHCBP1-201ENST00000303383 ANKFN1Q8N957 763 aa13.82□□□□□ -0.2
SHCBP1-201ENST00000303383 MFSD2AQ8NA29 543 aa13.82□□□□□ -0.2
SHCBP1-201ENST00000303383 OR5AK3PQ8NH89 298 aa13.82□□□□□ -0.2
SHCBP1-201ENST00000303383 NETO1Q8TDF5 533 aa13.82□□□□□ -0.2
SHCBP1-201ENST00000303383 DPH2Q9BQC3 489 aaPredicted RBP13.82□□□□□ -0.2
SHCBP1-201ENST00000303383 RAD21L1Q9H4I0 556 aa13.82□□□□□ -0.2
SHCBP1-201ENST00000303383 PADI4Q9UM07 663 aa13.82□□□□□ -0.2
SHCBP1-201ENST00000303383 SAMD4AQ9UPU9 718 aaKnown RBP13.82□□□□□ -0.2
SHCBP1-201ENST00000303383 A0A0J9YVX5 310 aa13.82□□□□□ -0.2
SHCBP1-201ENST00000303383 KRT75O95678 551 aa13.82□□□□□ -0.2
SHCBP1-201ENST00000303383 TBX6O95947 436 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms