RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 PCDHB11Q9Y5F2 797 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 PCDHB1Q9Y5F3 818 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 TRPM7Q96QT4 1865 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 OR5K3A6NET4 321 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 ZAR1LA6NP61 321 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 LRRTM2O43300 516 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 TSC22D2O75157 780 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 RPS3P23396 243 aaKnown RBP eCLIP10.44□□□□□ -0.74
ZNF558-201ENST00000301475 GRK4P32298 578 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 FEN1P39748 380 aaKnown RBP10.44□□□□□ -0.74
ZNF558-201ENST00000301475 MAPK12P53778 367 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 SELENOWP63302 87 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 ALDH6A1Q02252 535 aaKnown RBP10.44□□□□□ -0.74
ZNF558-201ENST00000301475 CACNG1Q06432 222 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 NFE2L1Q14494 772 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 TJAP1Q5JTD0 557 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 KLHL17Q6TDP4 642 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 FAM151BQ6UXP7 276 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 GDPGP1Q6ZNW5 385 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 SYT12Q8IV01 421 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 NAGSQ8N159 534 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 SYT14Q8NB59 555 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 LRRC20Q8TCA0 184 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 GFM1Q96RP9 751 aaKnown RBP10.44□□□□□ -0.74
ZNF558-201ENST00000301475 SLC25A19Q9HC21 320 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 GALNT9Q9HCQ5 603 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 B3GAT2Q9NPZ5 323 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 LATS2Q9NRM7 1088 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 IL17CQ9P0M4 197 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 SH3BP4Q9P0V3 963 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 MALT1Q9UDY8 824 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 YARS2Q9Y2Z4 477 aaKnown RBP10.44□□□□□ -0.74
ZNF558-201ENST00000301475 TDRD15B5MCY1 1934 aaKnown RBP10.44□□□□□ -0.74
ZNF558-201ENST00000301475 C1orf226A1L170 272 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 WASHC1A8K0Z3 465 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 FADS2P1A8MWK0 482 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 M0QZQ0 153 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 GAPDHSO14556 408 aaPredicted RBP10.44□□□□□ -0.74
ZNF558-201ENST00000301475 TRIM3O75382 744 aaPredicted RBP10.44□□□□□ -0.74
ZNF558-201ENST00000301475 AP2A2O94973 939 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 F11P03951 625 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 PIPP12273 146 aaPredicted RBP10.44□□□□□ -0.74
ZNF558-201ENST00000301475 NAGAP17050 411 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 DDX5P17844 614 aaKnown RBP10.44□□□□□ -0.74
ZNF558-201ENST00000301475 PRPS1L1P21108 318 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 ENPP1P22413 925 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 PRPH2P23942 346 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 POU1F1P28069 291 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 PCGF2P35227 344 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 RGNQ15493 299 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 ZBTB37Q5TC79 503 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 LCN1P1Q5VSP4 162 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 SPRYD7Q5W111 196 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 PHC2Q8IXK0 858 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 AQP11Q8NBQ7 271 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 OR9Q1Q8NGQ5 310 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 FAM193BQ96PV7 902 aaPredicted RBP10.44□□□□□ -0.74
ZNF558-201ENST00000301475 ZIC5Q96T25 663 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 C1QTNF7Q9BXJ2 289 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 CLN6Q9NWW5 311 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 TXNL4BQ9NX01 149 aaKnown RBP10.44□□□□□ -0.74
ZNF558-201ENST00000301475 MARCH2Q9P0N8 246 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 NUP50Q9UKX7 468 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 MAPRE3Q9UPY8 281 aa10.44□□□□□ -0.74
ZNF558-201ENST00000301475 DOCK3Q8IZD9 2030 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 TRIM77I1YAP6 450 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 TNFRSF21O75509 655 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 ZNF250P15622 560 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 DGKAP23743 735 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 MAPK1P28482 360 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 RRAS2P62070 204 aaPredicted RBP10.43□□□□□ -0.74
ZNF558-201ENST00000301475 BOP1Q14137 746 aaKnown RBP10.43□□□□□ -0.74
ZNF558-201ENST00000301475 GANABQ14697 944 aaKnown RBP10.43□□□□□ -0.74
ZNF558-201ENST00000301475 LEXMQ3ZCV2 418 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 MPPE1Q53F39 396 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 DDI2Q5TDH0 399 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 C22orf42Q6IC83 251 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 TMIGD1Q6UXZ0 262 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 BCDIN3DQ7Z5W3 292 aaKnown RBP10.43□□□□□ -0.74
ZNF558-201ENST00000301475 GPR142Q7Z601 462 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 FAM9CQ8IZT9 166 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 TTC9BQ8N6N2 239 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 OR8H1Q8NGG4 311 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 TMEM203Q969S6 136 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 MARVELD3Q96A59 401 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 POLR2J2Q9GZM3 115 aaKnown RBP10.43□□□□□ -0.74
ZNF558-201ENST00000301475 TRIM45Q9H8W5 580 aaPredicted RBP10.43□□□□□ -0.74
ZNF558-201ENST00000301475 RBFOX1Q9NWB1 397 aaKnown RBP10.43□□□□□ -0.74
ZNF558-201ENST00000301475 ING3Q9NXR8 418 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 ST3GAL5Q9UNP4 418 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 POLHQ9Y253 713 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 TEX51A0A1B0GUA7 166 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 ARHGEF15O94989 841 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 LGI1O95970 557 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 IGFBP1P08833 259 aaPredicted RBP10.43□□□□□ -0.74
ZNF558-201ENST00000301475 GSTM1P09488 218 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 ZNF865P0CJ78 1059 aaPredicted RBP10.43□□□□□ -0.74
ZNF558-201ENST00000301475 ARSBP15848 533 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 TACR2P21452 398 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 LIMS1P48059 325 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms