RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 LEFTY1O75610 366 aa12.92□□□□□ -0.34
CTDP1-202ENST00000299543 GAB1Q13480 694 aa12.92□□□□□ -0.34
CTDP1-202ENST00000299543 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.92□□□□□ -0.34
CTDP1-202ENST00000299543 ERAP2Q6P179 960 aa12.92□□□□□ -0.34
CTDP1-202ENST00000299543 OTOP2Q7RTS6 562 aa12.92□□□□□ -0.34
CTDP1-202ENST00000299543 ZNF438Q7Z4V0 828 aa12.92□□□□□ -0.34
CTDP1-202ENST00000299543 CHCHD4Q8N4Q1 142 aa12.92□□□□□ -0.34
CTDP1-202ENST00000299543 IL17RDQ8NFM7 739 aa12.92□□□□□ -0.34
CTDP1-202ENST00000299543 HUS1BQ8NHY5 278 aa12.92□□□□□ -0.34
CTDP1-202ENST00000299543 PIK3R3Q92569 461 aa12.92□□□□□ -0.34
CTDP1-202ENST00000299543 TMEM184CQ9NVA4 438 aa12.92□□□□□ -0.34
CTDP1-202ENST00000299543 PCDHB11Q9Y5F2 797 aa12.92□□□□□ -0.34
CTDP1-202ENST00000299543 TGM5O43548 720 aa12.91□□□□□ -0.34
CTDP1-202ENST00000299543 ITGAMP11215 1152 aa12.91□□□□□ -0.34
CTDP1-202ENST00000299543 COX20Q5RI15 118 aa12.91□□□□□ -0.34
CTDP1-202ENST00000299543 TMEM220Q6QAJ8 160 aa12.91□□□□□ -0.34
CTDP1-202ENST00000299543 CCDC71Q8IV32 467 aaPredicted RBP12.91□□□□□ -0.34
CTDP1-202ENST00000299543 TRIM48Q8IWZ4 208 aa12.91□□□□□ -0.34
CTDP1-202ENST00000299543 SVOPQ8N4V2 548 aa12.91□□□□□ -0.34
CTDP1-202ENST00000299543 MINDY2Q8NBR6 621 aa12.91□□□□□ -0.34
CTDP1-202ENST00000299543 RHOXF1Q8NHV9 184 aa12.91□□□□□ -0.34
CTDP1-202ENST00000299543 SAMD11Q96NU1 681 aa12.91□□□□□ -0.34
CTDP1-202ENST00000299543 RLIMQ9NVW2 624 aa12.91□□□□□ -0.34
CTDP1-202ENST00000299543 RWDD3Q9Y3V2 267 aa12.91□□□□□ -0.34
CTDP1-202ENST00000299543 SLC22A1O15245 554 aa12.91□□□□□ -0.34
CTDP1-202ENST00000299543 CATP04040 527 aaKnown RBP12.91□□□□□ -0.34
CTDP1-202ENST00000299543 POLR2LP62875 67 aaKnown RBP12.91□□□□□ -0.34
CTDP1-202ENST00000299543 DEFB103AP81534 67 aa12.91□□□□□ -0.34
CTDP1-202ENST00000299543 SLAMF1Q13291 335 aa12.91□□□□□ -0.34
CTDP1-202ENST00000299543 ARHGEF6Q15052 776 aa12.91□□□□□ -0.34
CTDP1-202ENST00000299543 ZNF284Q2VY69 593 aa12.91□□□□□ -0.34
CTDP1-202ENST00000299543 CBLL1Q75N03 491 aa12.91□□□□□ -0.34
CTDP1-202ENST00000299543 PLPP6Q8IY26 295 aa12.91□□□□□ -0.34
CTDP1-202ENST00000299543 SLIRPQ9GZT3 109 aaKnown RBP12.91□□□□□ -0.34
CTDP1-202ENST00000299543 IMPAD1Q9NX62 359 aa12.91□□□□□ -0.34
CTDP1-202ENST00000299543 FBXL12Q9NXK8 326 aa12.91□□□□□ -0.34
CTDP1-202ENST00000299543 J3KTA2 159 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 KPNA3O00505 521 aaPredicted RBP12.9□□□□□ -0.34
CTDP1-202ENST00000299543 C6orf47O95873 294 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 C9P02748 559 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 C8AP07357 584 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 GPX2P18283 190 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 CHI3L1P36222 383 aaPredicted RBP12.9□□□□□ -0.34
CTDP1-202ENST00000299543 PPP5CP53041 499 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 AP1S2P56377 157 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 TLE2Q04725 743 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 IL18R1Q13478 541 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 DDX53Q86TM3 631 aaKnown RBP12.9□□□□□ -0.34
CTDP1-202ENST00000299543 CFAP206Q8IYR0 622 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 SLC5A8Q8N695 610 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 OR7G3Q8NG95 312 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 DYNC2LI1Q8TCX1 351 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 SNAPC3Q92966 411 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 CIDECQ96AQ7 238 aaPredicted RBP12.9□□□□□ -0.34
CTDP1-202ENST00000299543 FERD3LQ96RJ6 166 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 DUSP21Q9H596 190 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 CPNE5Q9HCH3 593 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 RANGRFQ9HD47 186 aaPredicted RBP12.9□□□□□ -0.34
CTDP1-202ENST00000299543 RAD18Q9NS91 495 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 STOX2Q9P2F5 926 aaPredicted RBP12.9□□□□□ -0.34
CTDP1-202ENST00000299543 RAB23Q9ULC3 237 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 WBP11Q9Y2W2 641 aaKnown RBP12.9□□□□□ -0.34
CTDP1-202ENST00000299543 CDH23Q9H251 3354 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 SCN5AQ14524 2016 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 GFYI3L273 518 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 ZNF197O14709 1029 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 GRM6O15303 877 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 AIREO43918 545 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 SCN2BO60939 215 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 MAGEA2P43356 314 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 OR3A3P47888 321 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 SNTA1Q13424 505 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 RGNQ15493 299 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 TBRG1Q3YBR2 411 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 ERICH5Q6P6B1 374 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 SZRD1Q7Z422 152 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 TSPYL5Q86VY4 417 aaPredicted RBP12.9□□□□□ -0.34
CTDP1-202ENST00000299543 TRAPPC5Q8IUR0 188 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 NPAS3Q8IXF0 933 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 TCEAL8Q8IYN2 117 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 ENTHD1Q8IYW4 607 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 CRIPAKQ8N1N5 446 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 STX19Q8N4C7 294 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 OR52E4Q8NGH9 312 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 NEIL2Q969S2 332 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 TCEAL4Q96EI5 215 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 VMP1Q96GC9 406 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 FOPNLQ96NB1 174 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 OR4K3Q96R72 315 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 NUAK2Q9H093 628 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 DCSTAMPQ9H295 470 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 KCNN3Q9UGI6 736 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 OGDHLQ9ULD0 1010 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 PLXNA4Q9HCM2 1894 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 KIAA0100Q14667 2235 aaKnown RBP12.9□□□□□ -0.34
CTDP1-202ENST00000299543 TNFRSF21O75509 655 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 GABARAPO95166 117 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 DEFA1P59665 94 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 DEFA3P59666 94 aa12.9□□□□□ -0.34
CTDP1-202ENST00000299543 UBE3AQ05086 875 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms