RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 TACSTD2P09758 323 aa17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 GPR89BP0CG08 455 aa17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 SLC35E2BP0CK96 405 aa17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 DRD2P14416 443 aa17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 USP30Q70CQ3 517 aa17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 RNF130Q86XS8 419 aa17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 S100ZQ8WXG8 99 aa17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 MSANTD3Q96H12 275 aa17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 ZBTB26Q9HCK0 441 aa17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 ITGB1BP2Q9UKP3 347 aa17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 PCDHGB5Q9Y5G0 923 aa17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 IL3P08700 152 aa17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 RGS21Q2M5E4 152 aa17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 OR2T5Q6IEZ7 315 aa17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 ZFAND4Q86XD8 727 aa17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 PROKR2Q8NFJ6 384 aa17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 OR2T29Q8NH02 315 aa17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 TPK1Q9H3S4 243 aa17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 TMX2-CTNND1H3BSU7 103 aa17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 PDYNP01213 254 aa17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 ALDOAP04075 364 aaKnown RBP17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 ITGB4P16144 1822 aa17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 FLYWCH1Q4VC44 716 aa17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 HSPA12BQ96MM6 686 aa17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 F2RL3Q96RI0 385 aa17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 ZNF395Q9H8N7 513 aaPredicted RBP17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 SLC35C2Q9NQQ7 365 aa17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 WBP11Q9Y2W2 641 aaKnown RBP17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 P2RY2P41231 377 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 TMEM174Q8WUU8 243 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 NODALQ96S42 347 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 DUSP23Q9BVJ7 150 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 TMEM5Q9Y2B1 443 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 PCDHGB1Q9Y5G3 927 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 SLC6A11P48066 632 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 CDKN2DP55273 166 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 SMU1Q2TAY7 513 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 IQCCQ4KMZ1 466 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 LRRC25Q8N386 305 aaPredicted RBP17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 OR9I1Q8NGQ6 314 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 ZNF778Q96MU6 729 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 SPO11Q9Y5K1 396 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 KIR2DS5A0A0G2JLQ3 304 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 A0A0G2JNG1 304 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 KIR2DS3K7RE56 304 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 EMC8O43402 210 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 SYNGR4O95473 234 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 SOX9P48436 509 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 KIR2DS5Q14953 304 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 SHHQ15465 462 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 PARS2Q7L3T8 475 aaKnown RBP17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 EZH1Q92800 747 aaPredicted RBP17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 SEC61A2Q9H9S3 476 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 MARCH5Q9NX47 278 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 PDE10AQ9Y233 779 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 LIPT1Q9Y234 373 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 RFXAPO00287 272 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 TNFRSF10BO14763 440 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 IDH3BO43837 385 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 RBMXL2O75526 392 aaKnown RBP17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 NADKO95544 446 aaPredicted RBP17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 HOXD8P13378 290 aaPredicted RBP17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 PPP2R2BQ00005 443 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 PLCXD2Q0VAA5 305 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 SPATS1Q496A3 300 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 BBS10Q8TAM1 723 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 SLC22A8Q8TCC7 542 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 SH3YL1Q96HL8 342 aaPredicted RBP17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 CD180Q99467 661 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 LPAR4Q99677 370 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 CENPMQ9NSP4 180 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 MCUBQ9NWR8 336 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 VLDLRP98155 873 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 ZNF846Q147U1 533 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 TMEM240Q5SV17 173 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 C6orf52Q5T4I8 152 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 DENND5AQ6IQ26 1287 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 SLC12A9Q9BXP2 914 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 RPF2Q9H7B2 306 aaKnown RBP17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 POFUT2Q9Y2G5 429 aa17.03■□□□□ 0.32
CDC42EP3-201ENST00000295324 CER1O95813 267 aa17.02■□□□□ 0.32
CDC42EP3-201ENST00000295324 MGAT3Q09327 533 aa17.02■□□□□ 0.32
CDC42EP3-201ENST00000295324 ADGRE1Q14246 886 aa17.02■□□□□ 0.32
CDC42EP3-201ENST00000295324 GBX1Q14549 363 aa17.02■□□□□ 0.32
CDC42EP3-201ENST00000295324 ANKRD26P1Q6NSI1 321 aa17.02■□□□□ 0.32
CDC42EP3-201ENST00000295324 LIPIQ6XZB0 460 aa17.02■□□□□ 0.32
CDC42EP3-201ENST00000295324 RBP7Q96R05 134 aa17.02■□□□□ 0.32
CDC42EP3-201ENST00000295324 BOCQ9BWV1 1114 aa17.02■□□□□ 0.32
CDC42EP3-201ENST00000295324 ETAA1Q9NY74 926 aa17.02■□□□□ 0.32
CDC42EP3-201ENST00000295324 ACTL7AQ9Y615 435 aa17.02■□□□□ 0.32
CDC42EP3-201ENST00000295324 HOXA9P31269 272 aa17.02■□□□□ 0.32
CDC42EP3-201ENST00000295324 CD68P34810 354 aaPredicted RBP17.02■□□□□ 0.32
CDC42EP3-201ENST00000295324 DAG1Q14118 895 aa17.02■□□□□ 0.32
CDC42EP3-201ENST00000295324 CLEC12AQ5QGZ9 265 aa17.02■□□□□ 0.32
CDC42EP3-201ENST00000295324 PRPF38BQ5VTL8 546 aaKnown RBP17.02■□□□□ 0.32
CDC42EP3-201ENST00000295324 TANGO2Q6ICL3 276 aa17.02■□□□□ 0.32
CDC42EP3-201ENST00000295324 CHST4Q8NCG5 386 aa17.02■□□□□ 0.32
CDC42EP3-201ENST00000295324 DTD2Q96FN9 168 aa17.02■□□□□ 0.32
CDC42EP3-201ENST00000295324 DFNA5O60443 496 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms