RNA–Protein interactions for RNA: ENST00000294785.9

NCSTN-201, Transcript of nicastrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCSTN, Length 2,936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-201ENST00000294785 CDK6Q00534 326 aa13.11□□□□□ -0.31
NCSTN-201ENST00000294785 PRKCDQ05655 676 aa13.11□□□□□ -0.31
NCSTN-201ENST00000294785 IRF3Q14653 427 aa13.11□□□□□ -0.31
NCSTN-201ENST00000294785 INAVAQ3KP66 663 aa13.11□□□□□ -0.31
NCSTN-201ENST00000294785 ARSIQ5FYB1 569 aa13.11□□□□□ -0.31
NCSTN-201ENST00000294785 IKBIPQ70UQ0 350 aa13.11□□□□□ -0.31
NCSTN-201ENST00000294785 ZNF367Q7RTV3 350 aa13.11□□□□□ -0.31
NCSTN-201ENST00000294785 SNX29P2Q8IUI4 249 aa13.11□□□□□ -0.31
NCSTN-201ENST00000294785 OR4K1Q8NGD4 311 aa13.11□□□□□ -0.31
NCSTN-201ENST00000294785 NFKBIDQ8NI38 313 aa13.11□□□□□ -0.31
NCSTN-201ENST00000294785 PSMA8Q8TAA3 256 aa13.11□□□□□ -0.31
NCSTN-201ENST00000294785 NIPSNAP1Q9BPW8 284 aa13.11□□□□□ -0.31
NCSTN-201ENST00000294785 SGPP1Q9BX95 441 aa13.11□□□□□ -0.31
NCSTN-201ENST00000294785 ZBP1Q9H171 429 aa13.11□□□□□ -0.31
NCSTN-201ENST00000294785 CNOT2Q9NZN8 540 aaKnown RBP13.11□□□□□ -0.31
NCSTN-201ENST00000294785 SCHIP1Q9P0W5 487 aaPredicted RBP13.11□□□□□ -0.31
NCSTN-201ENST00000294785 ANKMY1Q9P2S6 941 aa13.11□□□□□ -0.31
NCSTN-201ENST00000294785 IL36AQ9UHA7 158 aa13.11□□□□□ -0.31
NCSTN-201ENST00000294785 ANGPT4Q9Y264 503 aa13.11□□□□□ -0.31
NCSTN-201ENST00000294785 HCN4Q9Y3Q4 1203 aa13.11□□□□□ -0.31
NCSTN-201ENST00000294785 TSC22D4Q9Y3Q8 395 aa13.11□□□□□ -0.31
NCSTN-201ENST00000294785 PSMD11O00231 422 aa13.11□□□□□ -0.31
NCSTN-201ENST00000294785 TYRP14679 529 aa13.11□□□□□ -0.31
NCSTN-201ENST00000294785 SERPINB1P30740 379 aa13.11□□□□□ -0.31
NCSTN-201ENST00000294785 TGFBR1P36897 503 aa13.11□□□□□ -0.31
NCSTN-201ENST00000294785 PIK3CBP42338 1070 aa13.11□□□□□ -0.31
NCSTN-201ENST00000294785 TMED10P49755 219 aaKnown RBP13.11□□□□□ -0.31
NCSTN-201ENST00000294785 LIMK1P53667 647 aa13.11□□□□□ -0.31
NCSTN-201ENST00000294785 PCBP3P57721 371 aaKnown RBP13.11□□□□□ -0.31
NCSTN-201ENST00000294785 ZNF658BQ4V348 819 aaPredicted RBP13.11□□□□□ -0.31
NCSTN-201ENST00000294785 ZNF805Q5CZA5 627 aa13.11□□□□□ -0.31
NCSTN-201ENST00000294785 FAM71E1Q6IPT2 247 aa13.11□□□□□ -0.31
NCSTN-201ENST00000294785 LILRA6Q6PI73 481 aa13.11□□□□□ -0.31
NCSTN-201ENST00000294785 TMEM220Q6QAJ8 160 aa13.11□□□□□ -0.31
NCSTN-201ENST00000294785 LYSMD2Q8IV50 215 aa13.11□□□□□ -0.31
NCSTN-201ENST00000294785 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.11□□□□□ -0.31
NCSTN-201ENST00000294785 ITM2CQ9NQX7 267 aa13.11□□□□□ -0.31
NCSTN-201ENST00000294785 CCL26Q9Y258 94 aa13.11□□□□□ -0.31
NCSTN-201ENST00000294785 PCDHGA3Q9Y5H0 932 aa13.11□□□□□ -0.31
NCSTN-201ENST00000294785 MN1Q10571 1320 aaPredicted RBP13.1□□□□□ -0.31
NCSTN-201ENST00000294785 EFCAB10A6NFE3 127 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 NRG2O14511 850 aaPredicted RBP13.1□□□□□ -0.31
NCSTN-201ENST00000294785 SH3BGRLO75368 114 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 ARAFP10398 606 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 NPPBP16860 134 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 S100A5P33763 92 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 MMP12P39900 470 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 GSSP48637 474 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 PRMT2P55345 433 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 SLBPQ14493 270 aaKnown RBP eCLIP13.1□□□□□ -0.31
NCSTN-201ENST00000294785 TIMM50Q3ZCQ8 353 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 BCL7AQ4VC05 210 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 PNCKQ6P2M8 343 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 ZNF852Q6ZMS4 543 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 SYTL1Q8IYJ3 562 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 LILRA3Q8N6C8 439 aaPredicted RBP13.1□□□□□ -0.31
NCSTN-201ENST00000294785 C16orf78Q8WTQ4 265 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 UBE2E3Q969T4 207 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 AP2M1Q96CW1 435 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 CORO1BQ9BR76 489 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 CDCA4Q9BXL8 241 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 SPHK2Q9NRA0 654 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 RLIMQ9NVW2 624 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 DUSP12Q9UNI6 340 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 FAM32AQ9Y421 112 aaKnown RBP13.1□□□□□ -0.31
NCSTN-201ENST00000294785 DOCK6Q96HP0 2047 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 ABHD14A-ACY1A0A1B0GW23 586 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 PIPSLA2A3N6 862 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 ELFN1P0C7U0 828 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 RHCEP18577 417 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 CHI3L1P36222 383 aaPredicted RBP13.1□□□□□ -0.31
NCSTN-201ENST00000294785 OR1E2P47887 323 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 RGS6P49758 472 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 VASPP50552 380 aaPredicted RBP13.1□□□□□ -0.31
NCSTN-201ENST00000294785 ST3GAL4Q11206 333 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 ERAP2Q6P179 960 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 FAM92BQ6ZTR7 304 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 ARMCX6Q7L4S7 300 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 OTOP2Q7RTS6 562 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 METTL4Q8N3J2 472 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 OR52J3Q8NH60 311 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 UTP15Q8TED0 518 aaKnown RBP13.1□□□□□ -0.31
NCSTN-201ENST00000294785 FOXJ1Q92949 421 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 ZCCHC2Q9C0B9 1178 aaKnown RBP13.1□□□□□ -0.31
NCSTN-201ENST00000294785 ACER3Q9NUN7 267 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 GPR83Q9NYM4 423 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 ZNF229Q9UJW7 825 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 ENPP4Q9Y6X5 453 aa13.1□□□□□ -0.31
NCSTN-201ENST00000294785 CCNB2O95067 398 aa13.09□□□□□ -0.31
NCSTN-201ENST00000294785 FGF19O95750 216 aa13.09□□□□□ -0.31
NCSTN-201ENST00000294785 RB1P06400 928 aa13.09□□□□□ -0.31
NCSTN-201ENST00000294785 PDHA2P29803 388 aa13.09□□□□□ -0.31
NCSTN-201ENST00000294785 C2orf80Q0P641 193 aa13.09□□□□□ -0.31
NCSTN-201ENST00000294785 KRR1Q13601 381 aaKnown RBP13.09□□□□□ -0.31
NCSTN-201ENST00000294785 ARMCX4Q5H9R4 360 aa13.09□□□□□ -0.31
NCSTN-201ENST00000294785 LIPIQ6XZB0 460 aa13.09□□□□□ -0.31
NCSTN-201ENST00000294785 PPP1R16AQ96I34 528 aa13.09□□□□□ -0.31
NCSTN-201ENST00000294785 MRGPRX3Q96LB0 322 aa13.09□□□□□ -0.31
NCSTN-201ENST00000294785 CREBZFQ9NS37 354 aa13.09□□□□□ -0.31
NCSTN-201ENST00000294785 TBC1D14Q9P2M4 693 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms