RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 PCDHGB2Q9Y5G2 931 aa16.92■□□□□ 0.3
PCDHA13-201ENST00000289272 IGKV6D-21A0A0A0MT36 114 aa16.92■□□□□ 0.3
PCDHA13-201ENST00000289272 NAP1L6A6NFF2 107 aa16.92■□□□□ 0.3
PCDHA13-201ENST00000289272 CSF2P04141 144 aa16.92■□□□□ 0.3
PCDHA13-201ENST00000289272 FGF4P08620 206 aa16.92■□□□□ 0.3
PCDHA13-201ENST00000289272 GNAO1P09471 354 aa16.92■□□□□ 0.3
PCDHA13-201ENST00000289272 TRAPPC2P0DI81 140 aa16.92■□□□□ 0.3
PCDHA13-201ENST00000289272 TRAPPC2BP0DI82 140 aa16.92■□□□□ 0.3
PCDHA13-201ENST00000289272 ALDH3B2P48448 385 aa16.92■□□□□ 0.3
PCDHA13-201ENST00000289272 SLC13A2Q13183 592 aa16.92■□□□□ 0.3
PCDHA13-201ENST00000289272 GANABQ14697 944 aaKnown RBP16.92■□□□□ 0.3
PCDHA13-201ENST00000289272 SF3A2Q15428 464 aaKnown RBP16.92■□□□□ 0.3
PCDHA13-201ENST00000289272 XKR4Q5GH76 650 aa16.92■□□□□ 0.3
PCDHA13-201ENST00000289272 DESI1Q6ICB0 168 aa16.92■□□□□ 0.3
PCDHA13-201ENST00000289272 LRRN1Q6UXK5 716 aa16.92■□□□□ 0.3
PCDHA13-201ENST00000289272 PPIL3Q9H2H8 161 aaKnown RBP16.92■□□□□ 0.3
PCDHA13-201ENST00000289272 LYARQ9NX58 379 aaKnown RBP16.92■□□□□ 0.3
PCDHA13-201ENST00000289272 ZDHHC3Q9NYG2 299 aa16.92■□□□□ 0.3
PCDHA13-201ENST00000289272 WRBO00258 174 aa16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 CD1DP15813 335 aa16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 PRPF38BQ5VTL8 546 aaKnown RBP16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 ANKRD54Q6NXT1 300 aa16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 ZNF354BQ96LW1 612 aa16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 HERPUD2Q9BSE4 406 aa16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 TNKS2Q9H2K2 1166 aa16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 NLGN3Q9NZ94 848 aa16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 TBX18O95935 607 aa16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 PAHP00439 452 aa16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 RPS3AP61247 264 aaKnown RBP16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 GRSF1Q12849 480 aaKnown RBP eCLIP16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 GPR135Q8IZ08 494 aa16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 EXOSC8Q96B26 276 aaKnown RBP16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 MOAP1Q96BY2 351 aa16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 CD244Q9BZW8 370 aa16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 ATG10Q9H0Y0 220 aa16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 NLE1Q9NVX2 485 aaPredicted RBP16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 VIPP01282 170 aa16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 IFNA21P01568 189 aa16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 GMPRP36959 345 aa16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 STXBP1P61764 594 aaKnown RBP16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 ILF3Q12906 894 aaKnown RBP eCLIP16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 UNC50Q53HI1 259 aa16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 ABCB8Q9NUT2 735 aa16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 EDARQ9UNE0 448 aa16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 NUBP2Q9Y5Y2 271 aa16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 MAGEA11P43364 429 aa16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 CDKL1Q00532 357 aa16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 GSTM4Q03013 218 aa16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 UBAP2Q5T6F2 1119 aaKnown RBP16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 GDF6Q6KF10 455 aaPredicted RBP16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 ZNF598Q86UK7 904 aaKnown RBP16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 NEIL3Q8TAT5 605 aa16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 TMED9Q9BVK6 235 aa16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 CRTAC1Q9NQ79 661 aa16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 YIPF1Q9Y548 306 aa16.91■□□□□ 0.3
PCDHA13-201ENST00000289272 IGKV6-21A0A0C4DH24 114 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 HAS3O00219 553 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 STBD1O95210 358 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 CMPK1P30085 196 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 MS4A2Q01362 244 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 NFE2L1Q14494 772 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 REEP3Q6NUK4 255 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 NUDT13Q86X67 352 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 NPLOC4Q8TAT6 608 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 OVCA2Q8WZ82 227 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 HAPLN2Q9GZV7 340 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 IMP3Q9NV31 184 aaKnown RBP16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 A8MV72 311 aaPredicted RBP16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 G3V2L1 256 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 J3KR12 359 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 CRISP1P54107 249 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 CD47Q08722 323 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 CDK5R2Q13319 367 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 ADGRF1Q5T601 910 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 CEP97Q8IW35 865 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 TMEM174Q8WUU8 243 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 BHLHE41Q9C0J9 482 aaPredicted RBP16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 EXO5Q9H790 373 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 SCML2Q9UQR0 700 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 TLX2O43763 284 aaPredicted RBP16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 AOC2O75106 756 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 DNAJB6O75190 326 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 JUNBP17275 347 aaPredicted RBP16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 MAGEA12P43365 314 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 ZNF252P-AS1Q0IIN9 211 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 TBC1D25Q3MII6 688 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 PRSS55Q6UWB4 352 aaPredicted RBP16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 MKKSQ9NPJ1 570 aaPredicted RBP16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 PPIEQ9UNP9 301 aaKnown RBP16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 IRS2Q9Y4H2 1338 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 NME4O00746 187 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 KDELR2P33947 212 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 KIAA1161Q6NSJ0 714 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 RNF130Q86XS8 419 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 TBC1D15Q8TC07 691 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 CLCC1Q96S66 551 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 SDR39U1Q9NRG7 319 aaPredicted RBP16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 MAP10Q9P2G4 905 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 MYH15Q9Y2K3 1946 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 CREBL2O60519 120 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms