RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 SLC31A1O15431 190 aa15.25■□□□□ 0.03
SMAD6-201ENST00000288840 TLX2O43763 284 aaPredicted RBP15.25■□□□□ 0.03
SMAD6-201ENST00000288840 CCL5P13501 91 aa15.25■□□□□ 0.03
SMAD6-201ENST00000288840 MYL12AP19105 171 aa15.25■□□□□ 0.03
SMAD6-201ENST00000288840 NCF4Q15080 339 aa15.25■□□□□ 0.03
SMAD6-201ENST00000288840 SPIN4Q56A73 249 aa15.25■□□□□ 0.03
SMAD6-201ENST00000288840 CNKSR3Q6P9H4 555 aa15.25■□□□□ 0.03
SMAD6-201ENST00000288840 IQCF1Q8N6M8 205 aa15.25■□□□□ 0.03
SMAD6-201ENST00000288840 OR5AR1Q8NGP9 310 aa15.25■□□□□ 0.03
SMAD6-201ENST00000288840 SLC5A11Q8WWX8 675 aa15.25■□□□□ 0.03
SMAD6-201ENST00000288840 SMG7Q92540 1137 aaKnown RBP15.25■□□□□ 0.03
SMAD6-201ENST00000288840 RELTQ969Z4 430 aa15.25■□□□□ 0.03
SMAD6-201ENST00000288840 RAD51AP1Q96B01 352 aa15.25■□□□□ 0.03
SMAD6-201ENST00000288840 NUS1Q96E22 293 aa15.25■□□□□ 0.03
SMAD6-201ENST00000288840 C17orf62Q9BQA9 187 aa15.25■□□□□ 0.03
SMAD6-201ENST00000288840 TRIT1Q9H3H1 467 aaKnown RBP15.25■□□□□ 0.03
SMAD6-201ENST00000288840 RDH14Q9HBH5 336 aa15.25■□□□□ 0.03
SMAD6-201ENST00000288840 SLC52A3Q9NQ40 469 aa15.25■□□□□ 0.03
SMAD6-201ENST00000288840 GULP1Q9UBP9 304 aa15.25■□□□□ 0.03
SMAD6-201ENST00000288840 UGT2B17O75795 530 aa15.25■□□□□ 0.03
SMAD6-201ENST00000288840 IQCCQ4KMZ1 466 aa15.25■□□□□ 0.03
SMAD6-201ENST00000288840 TJAP1Q5JTD0 557 aa15.25■□□□□ 0.03
SMAD6-201ENST00000288840 PDZK1Q5T2W1 519 aa15.25■□□□□ 0.03
SMAD6-201ENST00000288840 AMZ2Q86W34 360 aa15.25■□□□□ 0.03
SMAD6-201ENST00000288840 IL20RAQ9UHF4 553 aa15.25■□□□□ 0.03
SMAD6-201ENST00000288840 DNMT3AQ9Y6K1 912 aaPredicted RBP15.25■□□□□ 0.03
SMAD6-201ENST00000288840 TDRD15B5MCY1 1934 aaKnown RBP15.25■□□□□ 0.03
SMAD6-201ENST00000288840 K7ESM1 405 aa15.25■□□□□ 0.03
SMAD6-201ENST00000288840 PAK4O96013 591 aaPredicted RBP15.25■□□□□ 0.03
SMAD6-201ENST00000288840 ANXA8P13928 327 aa15.25■□□□□ 0.03
SMAD6-201ENST00000288840 METAP1P53582 386 aa15.25■□□□□ 0.03
SMAD6-201ENST00000288840 ASTLQ6HA08 431 aaPredicted RBP15.25■□□□□ 0.03
SMAD6-201ENST00000288840 PSRC1Q6PGN9 363 aaPredicted RBP15.25■□□□□ 0.03
SMAD6-201ENST00000288840 BCDIN3DQ7Z5W3 292 aaKnown RBP15.25■□□□□ 0.03
SMAD6-201ENST00000288840 TSPYL5Q86VY4 417 aaPredicted RBP15.25■□□□□ 0.03
SMAD6-201ENST00000288840 C12orf66Q96MD2 445 aa15.25■□□□□ 0.03
SMAD6-201ENST00000288840 ACOT13Q9NPJ3 140 aa15.25■□□□□ 0.03
SMAD6-201ENST00000288840 PDCD11Q14690 1871 aaKnown RBP15.25■□□□□ 0.03
SMAD6-201ENST00000288840 NUAK1O60285 661 aa15.24■□□□□ 0.03
SMAD6-201ENST00000288840 PSMB5P28074 263 aa15.24■□□□□ 0.03
SMAD6-201ENST00000288840 SGCGQ13326 291 aa15.24■□□□□ 0.03
SMAD6-201ENST00000288840 XAF1Q6GPH4 301 aa15.24■□□□□ 0.03
SMAD6-201ENST00000288840 NIPSNAP1Q9BPW8 284 aa15.24■□□□□ 0.03
SMAD6-201ENST00000288840 AIF1LQ9BQI0 150 aa15.24■□□□□ 0.03
SMAD6-201ENST00000288840 TAS2R9Q9NYW1 312 aa15.24■□□□□ 0.03
SMAD6-201ENST00000288840 ATP6V1HQ9UI12 483 aa15.24■□□□□ 0.03
SMAD6-201ENST00000288840 CLEC4AQ9UMR7 237 aa15.24■□□□□ 0.03
SMAD6-201ENST00000288840 PIPSLA2A3N6 862 aa15.24■□□□□ 0.03
SMAD6-201ENST00000288840 TIMP2P16035 220 aa15.24■□□□□ 0.03
SMAD6-201ENST00000288840 CNR2P34972 360 aa15.24■□□□□ 0.03
SMAD6-201ENST00000288840 LASP1Q14847 261 aaKnown RBP15.24■□□□□ 0.03
SMAD6-201ENST00000288840 ZNF805Q5CZA5 627 aa15.24■□□□□ 0.03
SMAD6-201ENST00000288840 TCEAL5Q5H9L2 206 aa15.24■□□□□ 0.03
SMAD6-201ENST00000288840 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.24■□□□□ 0.03
SMAD6-201ENST00000288840 TRIM69Q86WT6 500 aa15.24■□□□□ 0.03
SMAD6-201ENST00000288840 KRT73Q86Y46 540 aa15.24■□□□□ 0.03
SMAD6-201ENST00000288840 CBARPQ8N350 705 aaPredicted RBP15.24■□□□□ 0.03
SMAD6-201ENST00000288840 OR9A1PQ8NGU1 263 aa15.24■□□□□ 0.03
SMAD6-201ENST00000288840 MAGIXQ9H6Y5 334 aa15.24■□□□□ 0.03
SMAD6-201ENST00000288840 PALMDQ9NP74 551 aa15.24■□□□□ 0.03
SMAD6-201ENST00000288840 TIGARQ9NQ88 270 aa15.24■□□□□ 0.03
SMAD6-201ENST00000288840 TBC1D14Q9P2M4 693 aa15.24■□□□□ 0.03
SMAD6-201ENST00000288840 C1GALT1C1LP0DN25 315 aa15.24■□□□□ 0.03
SMAD6-201ENST00000288840 IMPA1P29218 277 aa15.24■□□□□ 0.03
SMAD6-201ENST00000288840 USP30Q70CQ3 517 aa15.24■□□□□ 0.03
SMAD6-201ENST00000288840 DTX3Q8N9I9 347 aa15.24■□□□□ 0.03
SMAD6-201ENST00000288840 SLC9A6Q92581 669 aa15.24■□□□□ 0.03
SMAD6-201ENST00000288840 CEP295NLQ96MC4 621 aa15.24■□□□□ 0.03
SMAD6-201ENST00000288840 PRRG3Q9BZD7 231 aa15.24■□□□□ 0.03
SMAD6-201ENST00000288840 ZNF701M0R085 212 aaPredicted RBP15.23■□□□□ 0.03
SMAD6-201ENST00000288840 PI15O43692 258 aa15.23■□□□□ 0.03
SMAD6-201ENST00000288840 CCNKO75909 580 aa15.23■□□□□ 0.03
SMAD6-201ENST00000288840 BMP4P12644 408 aa15.23■□□□□ 0.03
SMAD6-201ENST00000288840 CD9P21926 228 aa15.23■□□□□ 0.03
SMAD6-201ENST00000288840 SLC19A1P41440 591 aa15.23■□□□□ 0.03
SMAD6-201ENST00000288840 SEC13P55735 322 aa15.23■□□□□ 0.03
SMAD6-201ENST00000288840 DMPKQ09013 629 aa15.23■□□□□ 0.03
SMAD6-201ENST00000288840 Q6ZNX1 250 aa15.23■□□□□ 0.03
SMAD6-201ENST00000288840 SHFQ7M4L6 423 aa15.23■□□□□ 0.03
SMAD6-201ENST00000288840 ZFP41Q8N8Y5 198 aa15.23■□□□□ 0.03
SMAD6-201ENST00000288840 POF1BQ8WVV4 589 aa15.23■□□□□ 0.03
SMAD6-201ENST00000288840 SLC38A4Q969I6 547 aa15.23■□□□□ 0.03
SMAD6-201ENST00000288840 MUL1Q969V5 352 aa15.23■□□□□ 0.03
SMAD6-201ENST00000288840 EFCAB11Q9BUY7 163 aa15.23■□□□□ 0.03
SMAD6-201ENST00000288840 SERHLQ9NQF3 203 aa15.23■□□□□ 0.03
SMAD6-201ENST00000288840 HCFC2Q9Y5Z7 792 aa15.23■□□□□ 0.03
SMAD6-201ENST00000288840 DOCK6Q96HP0 2047 aa15.23■□□□□ 0.03
SMAD6-201ENST00000288840 ANKRD33BA6NCL7 494 aa15.23■□□□□ 0.03
SMAD6-201ENST00000288840 PDPK1O15530 556 aa15.23■□□□□ 0.03
SMAD6-201ENST00000288840 FRS3O43559 492 aa15.23■□□□□ 0.03
SMAD6-201ENST00000288840 ZNF30P17039 623 aa15.23■□□□□ 0.03
SMAD6-201ENST00000288840 CCR2P41597 374 aa15.23■□□□□ 0.03
SMAD6-201ENST00000288840 AVPR1BP47901 424 aa15.23■□□□□ 0.03
SMAD6-201ENST00000288840 TRAF7Q6Q0C0 670 aa15.23■□□□□ 0.03
SMAD6-201ENST00000288840 HTR3DQ70Z44 454 aa15.23■□□□□ 0.03
SMAD6-201ENST00000288840 MTSS1LQ765P7 747 aa15.23■□□□□ 0.03
SMAD6-201ENST00000288840 ZBTB8BQ8NAP8 495 aaPredicted RBP15.23■□□□□ 0.03
SMAD6-201ENST00000288840 UBE2E3Q969T4 207 aa15.23■□□□□ 0.03
SMAD6-201ENST00000288840 CCDC115Q96NT0 180 aa15.23■□□□□ 0.03
SMAD6-201ENST00000288840 DSN1Q9H410 356 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms