RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 OR1E1P30953 314 aa12.33□□□□□ -0.44
HERC6-202ENST00000273960 GKP32189 559 aa12.33□□□□□ -0.44
HERC6-202ENST00000273960 VSX2P58304 361 aaPredicted RBP12.33□□□□□ -0.44
HERC6-202ENST00000273960 BNC1Q01954 994 aa12.33□□□□□ -0.44
HERC6-202ENST00000273960 PTGES3Q15185 160 aaKnown RBP12.33□□□□□ -0.44
HERC6-202ENST00000273960 SPHARQ15513 63 aa12.33□□□□□ -0.44
HERC6-202ENST00000273960 FBXO43Q4G163 708 aa12.33□□□□□ -0.44
HERC6-202ENST00000273960 IQCCQ4KMZ1 466 aa12.33□□□□□ -0.44
HERC6-202ENST00000273960 ZBTB37Q5TC79 503 aa12.33□□□□□ -0.44
HERC6-202ENST00000273960 CREB3L2Q70SY1 520 aa12.33□□□□□ -0.44
HERC6-202ENST00000273960 RDH10Q8IZV5 341 aa12.33□□□□□ -0.44
HERC6-202ENST00000273960 IQCF1Q8N6M8 205 aa12.33□□□□□ -0.44
HERC6-202ENST00000273960 RAET1EQ8TD07 263 aa12.33□□□□□ -0.44
HERC6-202ENST00000273960 USP7Q93009 1102 aa12.33□□□□□ -0.44
HERC6-202ENST00000273960 MARC2Q969Z3 335 aa12.33□□□□□ -0.44
HERC6-202ENST00000273960 APIPQ96GX9 242 aa12.33□□□□□ -0.44
HERC6-202ENST00000273960 C8orf48Q96LL4 319 aa12.33□□□□□ -0.44
HERC6-202ENST00000273960 C12orf10Q9HB07 376 aa12.33□□□□□ -0.44
HERC6-202ENST00000273960 SERHLQ9NQF3 203 aa12.33□□□□□ -0.44
HERC6-202ENST00000273960 TLR8Q9NR97 1041 aaKnown RBP12.33□□□□□ -0.44
HERC6-202ENST00000273960 RPS6KA6Q9UK32 745 aa12.33□□□□□ -0.44
HERC6-202ENST00000273960 VPS9D1Q9Y2B5 631 aa12.33□□□□□ -0.44
HERC6-202ENST00000273960 CCDC88CQ9P219 2028 aa12.33□□□□□ -0.44
HERC6-202ENST00000273960 CASKO14936 926 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 IRAK2O43187 625 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 LYRM1O43325 122 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 TSPAN12O95859 305 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 PRKAR1AP10644 381 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 COX7A2P14406 83 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 NUDT1P36639 197 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 ARMC12Q5T9G4 340 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 DDI2Q5TDH0 399 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 OR2G6Q5TZ20 316 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 PIK3R6Q5UE93 754 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 IL20RBQ6UXL0 311 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 UBE2Q1Q7Z7E8 422 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 HMGN2P46Q86SG4 172 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 FAM124AQ86V42 546 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 RNF130Q86XS8 419 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 LSM14AQ8ND56 463 aaKnown RBP12.32□□□□□ -0.44
HERC6-202ENST00000273960 KCTD13Q8WZ19 329 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 METTL2AQ96IZ6 378 aaKnown RBP12.32□□□□□ -0.44
HERC6-202ENST00000273960 SIGLEC11Q96RL6 698 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 CLMPQ9H6B4 373 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 NMUR1Q9HB89 426 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 SLC35C2Q9NQQ7 365 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 CLN6Q9NWW5 311 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 A3GALT2U3KPV4 340 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 A0A0D9SEW6 157 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 A0A1W2PQH9 124 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 STX16O14662 325 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 AKAP8O43823 692 aaKnown RBP12.32□□□□□ -0.44
HERC6-202ENST00000273960 KCNK5O95279 499 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 PDYNP01213 254 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 GBAP04062 536 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 PCSK1P29120 753 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 RPL34P49207 117 aaKnown RBP12.32□□□□□ -0.44
HERC6-202ENST00000273960 RRAS2P62070 204 aaPredicted RBP12.32□□□□□ -0.44
HERC6-202ENST00000273960 FKBP1BP68106 108 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 CSTF1Q05048 431 aaKnown RBP12.32□□□□□ -0.44
HERC6-202ENST00000273960 CTSL3PQ5NE16 218 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 AQP11Q8NBQ7 271 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 ARRDC2Q8TBH0 407 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 DCLRE1CQ96SD1 692 aaKnown RBP12.32□□□□□ -0.44
HERC6-202ENST00000273960 PKP4Q99569 1192 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 SEPT5Q99719 369 aaPredicted RBP12.32□□□□□ -0.44
HERC6-202ENST00000273960 BOCQ9BWV1 1114 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 CIPCQ9C0C6 399 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 TBC1D17Q9HA65 648 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 TMEM161AQ9NX61 479 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 SH3BP4Q9P0V3 963 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 CPNE7Q9UBL6 633 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 KIR3DL1P43629 444 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 CDC42P60953 191 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 CRYZQ08257 329 aaKnown RBP12.32□□□□□ -0.44
HERC6-202ENST00000273960 TWF1Q12792 350 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 SPOUT1Q5T280 376 aaKnown RBP12.32□□□□□ -0.44
HERC6-202ENST00000273960 ERICH5Q6P6B1 374 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 FAM171BQ6P995 826 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 BRAT1Q6PJG6 821 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 OR6K2Q8NGY2 324 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 OR52P1PQ8NH57 321 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 OR5AK3PQ8NH89 298 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 IGSF8Q969P0 613 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 SERPINB11Q96P15 392 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 RBCK1Q9BYM8 510 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 ACPTQ9BZG2 426 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 BRD7Q9NPI1 651 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 B3GAT2Q9NPZ5 323 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 CTPS2Q9NRF8 586 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 ZNF624Q9P2J8 865 aaPredicted RBP12.32□□□□□ -0.44
HERC6-202ENST00000273960 ATP6V1HQ9UI12 483 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 PAPPA2Q9BXP8 1791 aa12.32□□□□□ -0.44
HERC6-202ENST00000273960 PEPDP12955 493 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 ITPKAP23677 461 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 RGRP47804 291 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 CLCN4P51793 760 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 RAB14P61106 215 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 ASAH1Q13510 395 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 SYT12Q8IV01 421 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms