RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 FAM227AF5H4B4 570 aa16.47■□□□□ 0.23
SRF-201ENST00000265354 RTCAO00442 366 aaKnown RBP16.47■□□□□ 0.23
SRF-201ENST00000265354 SSR2P43308 183 aa16.47■□□□□ 0.23
SRF-201ENST00000265354 SELENBP1Q13228 472 aa16.47■□□□□ 0.23
SRF-201ENST00000265354 DPY19L3Q6ZPD9 716 aa16.47■□□□□ 0.23
SRF-201ENST00000265354 OR5M11Q96RB7 305 aa16.47■□□□□ 0.23
SRF-201ENST00000265354 TRMT61BQ9BVS5 477 aaKnown RBP16.47■□□□□ 0.23
SRF-201ENST00000265354 GORASP2Q9H8Y8 452 aa16.47■□□□□ 0.23
SRF-201ENST00000265354 PLCL2Q9UPR0 1127 aa16.47■□□□□ 0.23
SRF-201ENST00000265354 ARFGEF1Q9Y6D6 1849 aa16.47■□□□□ 0.23
SRF-201ENST00000265354 DNAJB5O75953 348 aa16.47■□□□□ 0.23
SRF-201ENST00000265354 AVPR1BP47901 424 aa16.47■□□□□ 0.23
SRF-201ENST00000265354 ACLYP53396 1101 aa16.47■□□□□ 0.23
SRF-201ENST00000265354 AGTRAPQ6RW13 159 aa16.47■□□□□ 0.23
SRF-201ENST00000265354 CMTM8Q8IZV2 173 aa16.47■□□□□ 0.23
SRF-201ENST00000265354 RAB42Q8N4Z0 105 aa16.47■□□□□ 0.23
SRF-201ENST00000265354 PCSK9Q8NBP7 692 aaKnown RBP16.47■□□□□ 0.23
SRF-201ENST00000265354 TADA1Q96BN2 335 aa16.47■□□□□ 0.23
SRF-201ENST00000265354 AP2M1Q96CW1 435 aa16.47■□□□□ 0.23
SRF-201ENST00000265354 ZNF282Q9UDV7 671 aaPredicted RBP16.47■□□□□ 0.23
SRF-201ENST00000265354 NUP50Q9UKX7 468 aa16.47■□□□□ 0.23
SRF-201ENST00000265354 PRSS21Q9Y6M0 314 aa16.47■□□□□ 0.23
SRF-201ENST00000265354 ELFN1P0C7U0 828 aa16.47■□□□□ 0.23
SRF-201ENST00000265354 RGS6P49758 472 aa16.47■□□□□ 0.23
SRF-201ENST00000265354 MTAPQ13126 283 aa16.47■□□□□ 0.23
SRF-201ENST00000265354 PNCKQ6P2M8 343 aa16.47■□□□□ 0.23
SRF-201ENST00000265354 Q8N402 240 aa16.47■□□□□ 0.23
SRF-201ENST00000265354 SPERTQ8NA61 448 aa16.47■□□□□ 0.23
SRF-201ENST00000265354 SNAPC3Q92966 411 aa16.47■□□□□ 0.23
SRF-201ENST00000265354 YARS2Q9Y2Z4 477 aaKnown RBP16.47■□□□□ 0.23
SRF-201ENST00000265354 LOC285095A0A1B0GVY8 99 aa16.46■□□□□ 0.23
SRF-201ENST00000265354 MEIOCA2RUB1 952 aa16.46■□□□□ 0.23
SRF-201ENST00000265354 CENPBD1B2RD01 187 aa16.46■□□□□ 0.23
SRF-201ENST00000265354 PTTG1O95997 202 aa16.46■□□□□ 0.23
SRF-201ENST00000265354 RETP07949 1114 aa16.46■□□□□ 0.23
SRF-201ENST00000265354 Q6ZVU0 165 aa16.46■□□□□ 0.23
SRF-201ENST00000265354 BTN2A1Q7KYR7 527 aa16.46■□□□□ 0.23
SRF-201ENST00000265354 BCDIN3DQ7Z5W3 292 aaKnown RBP16.46■□□□□ 0.23
SRF-201ENST00000265354 PTRH1Q86Y79 214 aaKnown RBP16.46■□□□□ 0.23
SRF-201ENST00000265354 OR10H4Q8NGA5 316 aa16.46■□□□□ 0.23
SRF-201ENST00000265354 OR5H6Q8NGV6 325 aa16.46■□□□□ 0.23
SRF-201ENST00000265354 ZNF419Q96HQ0 510 aaPredicted RBP16.46■□□□□ 0.23
SRF-201ENST00000265354 FUBP3Q96I24 572 aaKnown RBP eCLIP16.46■□□□□ 0.23
SRF-201ENST00000265354 TSSK6Q9BXA6 273 aa16.46■□□□□ 0.23
SRF-201ENST00000265354 ELAC1Q9H777 363 aaKnown RBP16.46■□□□□ 0.23
SRF-201ENST00000265354 ZCCHC3Q9NUD5 404 aaKnown RBP16.46■□□□□ 0.23
SRF-201ENST00000265354 CMAHPQ9Y471 501 aa16.46■□□□□ 0.23
SRF-201ENST00000265354 GABARAPO95166 117 aa16.46■□□□□ 0.23
SRF-201ENST00000265354 BMP7P18075 431 aa16.46■□□□□ 0.23
SRF-201ENST00000265354 MC1RQ01726 317 aa16.46■□□□□ 0.23
SRF-201ENST00000265354 DPY19L1Q2PZI1 675 aa16.46■□□□□ 0.23
SRF-201ENST00000265354 SLC35F1Q5T1Q4 408 aa16.46■□□□□ 0.23
SRF-201ENST00000265354 IQCHQ86VS3 1027 aa16.46■□□□□ 0.23
SRF-201ENST00000265354 NXPE1Q8N323 547 aa16.46■□□□□ 0.23
SRF-201ENST00000265354 JPH3Q8WXH2 748 aaPredicted RBP16.46■□□□□ 0.23
SRF-201ENST00000265354 CRELD1Q96HD1 420 aa16.46■□□□□ 0.23
SRF-201ENST00000265354 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.46■□□□□ 0.23
SRF-201ENST00000265354 SMG9Q9H0W8 520 aaKnown RBP16.46■□□□□ 0.23
SRF-201ENST00000265354 MROH6A6NGR9 719 aa16.46■□□□□ 0.23
SRF-201ENST00000265354 KDELR3O43731 214 aa16.46■□□□□ 0.23
SRF-201ENST00000265354 ATF6P18850 670 aa16.46■□□□□ 0.23
SRF-201ENST00000265354 PURAQ00577 322 aaKnown RBP16.46■□□□□ 0.23
SRF-201ENST00000265354 LYPLAL1Q5VWZ2 237 aa16.46■□□□□ 0.23
SRF-201ENST00000265354 XAF1Q6GPH4 301 aa16.46■□□□□ 0.23
SRF-201ENST00000265354 ARL9Q6T311 187 aa16.46■□□□□ 0.23
SRF-201ENST00000265354 GGHQ92820 318 aa16.46■□□□□ 0.23
SRF-201ENST00000265354 FYTTD1Q96QD9 318 aaKnown RBP16.46■□□□□ 0.23
SRF-201ENST00000265354 MBOAT4Q96T53 435 aa16.46■□□□□ 0.23
SRF-201ENST00000265354 UCK2Q9BZX2 261 aa16.46■□□□□ 0.23
SRF-201ENST00000265354 CARS2Q9HA77 564 aaKnown RBP16.46■□□□□ 0.23
SRF-201ENST00000265354 IL26Q9NPH9 171 aa16.46■□□□□ 0.23
SRF-201ENST00000265354 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.46■□□□□ 0.22
SRF-201ENST00000265354 IQCMA0A1B0GVH7 501 aa16.46■□□□□ 0.22
SRF-201ENST00000265354 GFRA2O00451 464 aa16.46■□□□□ 0.22
SRF-201ENST00000265354 AP2S1P53680 142 aaPredicted RBP16.46■□□□□ 0.22
SRF-201ENST00000265354 CTSL3PQ5NE16 218 aa16.46■□□□□ 0.22
SRF-201ENST00000265354 GPRC6AQ5T6X5 926 aa16.46■□□□□ 0.22
SRF-201ENST00000265354 CMTM7Q96FZ5 175 aa16.46■□□□□ 0.22
SRF-201ENST00000265354 CXXC1Q9P0U4 656 aaPredicted RBP16.46■□□□□ 0.22
SRF-201ENST00000265354 TRBV23OR9-2A0A075B6M9 112 aa16.45■□□□□ 0.22
SRF-201ENST00000265354 OR7A17O14581 309 aa16.45■□□□□ 0.22
SRF-201ENST00000265354 AP1S1P61966 158 aa16.45■□□□□ 0.22
SRF-201ENST00000265354 FXNQ16595 210 aa16.45■□□□□ 0.22
SRF-201ENST00000265354 ZNF613Q6PF04 617 aa16.45■□□□□ 0.22
SRF-201ENST00000265354 CHMP1BQ7LBR1 199 aa16.45■□□□□ 0.22
SRF-201ENST00000265354 GPR149Q86SP6 731 aa16.45■□□□□ 0.22
SRF-201ENST00000265354 UFD1Q92890 307 aa16.45■□□□□ 0.22
SRF-201ENST00000265354 RHBDF1Q96CC6 855 aa16.45■□□□□ 0.22
SRF-201ENST00000265354 MBD2Q9UBB5 411 aa16.45■□□□□ 0.22
SRF-201ENST00000265354 EDARQ9UNE0 448 aa16.45■□□□□ 0.22
SRF-201ENST00000265354 BRWD1Q9NSI6 2320 aa16.45■□□□□ 0.22
SRF-201ENST00000265354 INMT-MINDY4F8WBC2 141 aa16.45■□□□□ 0.22
SRF-201ENST00000265354 ARNTLO00327 626 aa16.45■□□□□ 0.22
SRF-201ENST00000265354 PRKAR2AP13861 404 aaKnown RBP16.45■□□□□ 0.22
SRF-201ENST00000265354 PPP2R2BQ00005 443 aa16.45■□□□□ 0.22
SRF-201ENST00000265354 DOC2AQ14183 400 aa16.45■□□□□ 0.22
SRF-201ENST00000265354 GINS1Q14691 196 aa16.45■□□□□ 0.22
SRF-201ENST00000265354 RAB41Q5JT25 222 aa16.45■□□□□ 0.22
SRF-201ENST00000265354 SERPINA13PQ6UXR4 307 aa16.45■□□□□ 0.22
SRF-201ENST00000265354 C9orf43Q8TAL5 461 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms