RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 TMEM198Q66K66 360 aa23.12■■□□□ 1.29
SCN1B-201ENST00000262631 ACSM2BQ68CK6 577 aa23.12■■□□□ 1.29
SCN1B-201ENST00000262631 RIPOR1Q6ZS17 1223 aa23.12■■□□□ 1.29
SCN1B-201ENST00000262631 SPATA21Q7Z572 469 aa23.12■■□□□ 1.29
SCN1B-201ENST00000262631 FNDC5Q8NAU1 212 aa23.12■■□□□ 1.29
SCN1B-201ENST00000262631 ACTRT2Q8TDY3 377 aa23.12■■□□□ 1.29
SCN1B-201ENST00000262631 C10orf82Q8WW14 230 aa23.12■■□□□ 1.29
SCN1B-201ENST00000262631 TAAR9Q96RI9 348 aa23.12■■□□□ 1.29
SCN1B-201ENST00000262631 TBCDQ9BTW9 1192 aa23.12■■□□□ 1.29
SCN1B-201ENST00000262631 C1orf50Q9BV19 199 aa23.12■■□□□ 1.29
SCN1B-201ENST00000262631 EBPLQ9BY08 206 aa23.12■■□□□ 1.29
SCN1B-201ENST00000262631 TCF7L2Q9NQB0 619 aa23.12■■□□□ 1.29
SCN1B-201ENST00000262631 DLGAP4Q9Y2H0 992 aa23.12■■□□□ 1.29
SCN1B-201ENST00000262631 SPTBN4Q9H254 2564 aa23.12■■□□□ 1.29
SCN1B-201ENST00000262631 ASPMQ8IZT6 3477 aa23.11■■□□□ 1.29
SCN1B-201ENST00000262631 C9orf172C9J069 976 aa23.11■■□□□ 1.29
SCN1B-201ENST00000262631 SGK494L7N484 410 aa23.11■■□□□ 1.29
SCN1B-201ENST00000262631 SNX3O60493 162 aa23.11■■□□□ 1.29
SCN1B-201ENST00000262631 GALR3O60755 368 aaPredicted RBP23.11■■□□□ 1.29
SCN1B-201ENST00000262631 VPS4BO75351 444 aa23.11■■□□□ 1.29
SCN1B-201ENST00000262631 HIST1H1TP22492 207 aaPredicted RBP23.11■■□□□ 1.29
SCN1B-201ENST00000262631 ATP5A1P25705 553 aaKnown RBP23.11■■□□□ 1.29
SCN1B-201ENST00000262631 C1orf189Q5VU69 101 aa23.11■■□□□ 1.29
SCN1B-201ENST00000262631 RHBDD2Q6NTF9 364 aa23.11■■□□□ 1.29
SCN1B-201ENST00000262631 CEACAM20Q6UY09 585 aa23.11■■□□□ 1.29
SCN1B-201ENST00000262631 ACOT4Q8N9L9 421 aa23.11■■□□□ 1.29
SCN1B-201ENST00000262631 SRFBP1Q8NEF9 429 aaKnown RBP23.11■■□□□ 1.29
SCN1B-201ENST00000262631 DDX31Q9H8H2 851 aaKnown RBP23.11■■□□□ 1.29
SCN1B-201ENST00000262631 PCDHB3Q9Y5E6 796 aa23.11■■□□□ 1.29
SCN1B-201ENST00000262631 FAM107AO95990 144 aa23.1■■□□□ 1.29
SCN1B-201ENST00000262631 ALDOCP09972 364 aaKnown RBP23.1■■□□□ 1.29
SCN1B-201ENST00000262631 ATXN8OSP0DMR3 200 aa23.1■■□□□ 1.29
SCN1B-201ENST00000262631 ITGAXP20702 1163 aa23.1■■□□□ 1.29
SCN1B-201ENST00000262631 TPP2P29144 1249 aaPredicted RBP23.1■■□□□ 1.29
SCN1B-201ENST00000262631 ARFIP2P53365 341 aa23.1■■□□□ 1.29
SCN1B-201ENST00000262631 ARSFP54793 590 aa23.1■■□□□ 1.29
SCN1B-201ENST00000262631 TGM3Q08188 693 aa23.1■■□□□ 1.29
SCN1B-201ENST00000262631 NOXRED1Q6NXP6 359 aa23.1■■□□□ 1.29
SCN1B-201ENST00000262631 GALNT18Q6P9A2 607 aa23.1■■□□□ 1.29
SCN1B-201ENST00000262631 ACAD11Q709F0 780 aa23.1■■□□□ 1.29
SCN1B-201ENST00000262631 OR5T3Q8NGG3 340 aa23.1■■□□□ 1.29
SCN1B-201ENST00000262631 DDA1Q9BW61 102 aa23.1■■□□□ 1.29
SCN1B-201ENST00000262631 ANKHQ9HCJ1 492 aa23.1■■□□□ 1.29
SCN1B-201ENST00000262631 AHSPQ9NZD4 102 aa23.1■■□□□ 1.29
SCN1B-201ENST00000262631 FOXJ2Q9P0K8 574 aa23.1■■□□□ 1.29
SCN1B-201ENST00000262631 NDOR1Q9UHB4 597 aa23.1■■□□□ 1.29
SCN1B-201ENST00000262631 SRPK3Q9UPE1 567 aa23.1■■□□□ 1.29
SCN1B-201ENST00000262631 PCDHGA8Q9Y5G5 932 aa23.1■■□□□ 1.29
SCN1B-201ENST00000262631 SPTBN2O15020 2390 aa23.1■■□□□ 1.29
SCN1B-201ENST00000262631 E9PBE3 544 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 TMPRSS11DO60235 418 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 KLHL41O60662 606 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 RDH16O75452 317 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 KIAA0754O94854 1291 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 TNFSF15O95150 251 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 LBPP18428 481 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 ARFIP1P53367 373 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 GABREP78334 506 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 OLR1P78380 273 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 FOXC1Q12948 553 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 YOD1Q5VVQ6 348 aaPredicted RBP23.09■■□□□ 1.29
SCN1B-201ENST00000262631 PIGWQ7Z7B1 504 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 NUDT13Q86X67 352 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 CEP70Q8NHQ1 597 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 ZDHHC19Q8WVZ1 309 aaPredicted RBP23.09■■□□□ 1.29
SCN1B-201ENST00000262631 MARK4Q96L34 752 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 FCRL1Q96LA6 429 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 ULBP3Q9BZM4 244 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 SLC7A5P2Q9GIP4 190 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 SIRT5Q9NXA8 310 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 MAU2Q9Y6X3 613 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 A0A0A6YYD5 115 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 A0A1B0GX78 115 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 DSCR3O14972 297 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 PCDH7O60245 1069 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 SCELO95171 688 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 TIA1P31483 386 aaKnown RBP eCLIP23.09■■□□□ 1.29
SCN1B-201ENST00000262631 OR1D4P47884 311 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 DIO3P55073 304 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 MTTPP55157 894 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 ERVK-8P63133 956 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 EMX2Q04743 252 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 CAMK2BQ13554 666 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 OGFOD2Q6N063 350 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 CLIP3Q96DZ5 547 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 MMABQ96EY8 250 aaPredicted RBP23.09■■□□□ 1.29
SCN1B-201ENST00000262631 METTL2AQ96IZ6 378 aaKnown RBP23.09■■□□□ 1.29
SCN1B-201ENST00000262631 RILPQ96NA2 401 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 GBP5Q96PP8 586 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 COPS7BQ9H9Q2 264 aaPredicted RBP23.09■■□□□ 1.29
SCN1B-201ENST00000262631 POLR1BQ9H9Y6 1135 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 TXLNGQ9NUQ3 528 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 PCDHGA3Q9Y5H0 932 aa23.09■■□□□ 1.29
SCN1B-201ENST00000262631 NSA2O95478 260 aaKnown RBP23.08■■□□□ 1.29
SCN1B-201ENST00000262631 TACR1P25103 407 aa23.08■■□□□ 1.29
SCN1B-201ENST00000262631 TSFMP43897 325 aaKnown RBP23.08■■□□□ 1.29
SCN1B-201ENST00000262631 PAGE2Q7Z2X7 111 aa23.08■■□□□ 1.29
SCN1B-201ENST00000262631 STON2Q8WXE9 905 aa23.08■■□□□ 1.29
SCN1B-201ENST00000262631 SERINC2Q96SA4 455 aa23.08■■□□□ 1.29
SCN1B-201ENST00000262631 CCDC28BQ9BUN5 200 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms