RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 IL10P22301 178 aa8.04□□□□□ -1.12
TMEM258-201ENST00000257262 PIK3CGP48736 1102 aa8.04□□□□□ -1.12
TMEM258-201ENST00000257262 PLA2G16P53816 162 aa8.04□□□□□ -1.12
TMEM258-201ENST00000257262 SKP1P63208 163 aa8.04□□□□□ -1.12
TMEM258-201ENST00000257262 C19orf57Q0VDD7 668 aa8.04□□□□□ -1.12
TMEM258-201ENST00000257262 RAPSNQ13702 412 aa8.04□□□□□ -1.12
TMEM258-201ENST00000257262 RUNX2Q13950 521 aa8.04□□□□□ -1.12
TMEM258-201ENST00000257262 CPSF6Q16630 551 aaKnown RBP eCLIP8.04□□□□□ -1.12
TMEM258-201ENST00000257262 TUBB8Q3ZCM7 444 aa8.04□□□□□ -1.12
TMEM258-201ENST00000257262 MINDY4Q4G0A6 757 aa8.04□□□□□ -1.12
TMEM258-201ENST00000257262 TCTN3Q6NUS6 607 aa8.04□□□□□ -1.12
TMEM258-201ENST00000257262 TMEM205Q6UW68 189 aa8.04□□□□□ -1.12
TMEM258-201ENST00000257262 PTRH1Q86Y79 214 aaKnown RBP8.04□□□□□ -1.12
TMEM258-201ENST00000257262 MYLK4Q86YV6 388 aaPredicted RBP8.04□□□□□ -1.12
TMEM258-201ENST00000257262 CA13Q8N1Q1 262 aa8.04□□□□□ -1.12
TMEM258-201ENST00000257262 GALNT16Q8N428 558 aa8.04□□□□□ -1.12
TMEM258-201ENST00000257262 AMER2Q8N7J2 671 aa8.04□□□□□ -1.12
TMEM258-201ENST00000257262 CLEC1AQ8NC01 280 aa8.04□□□□□ -1.12
TMEM258-201ENST00000257262 OR2L5Q8NG80 312 aa8.04□□□□□ -1.12
TMEM258-201ENST00000257262 OR52B6Q8NGF0 335 aa8.04□□□□□ -1.12
TMEM258-201ENST00000257262 ZNF483Q8TF39 744 aaPredicted RBP8.04□□□□□ -1.12
TMEM258-201ENST00000257262 UBE2E3Q969T4 207 aa8.04□□□□□ -1.12
TMEM258-201ENST00000257262 MTFMTQ96DP5 389 aaKnown RBP8.04□□□□□ -1.12
TMEM258-201ENST00000257262 NSUN5Q96P11 429 aaKnown RBP8.04□□□□□ -1.12
TMEM258-201ENST00000257262 QRFPRQ96P65 431 aa8.04□□□□□ -1.12
TMEM258-201ENST00000257262 F2RL3Q96RI0 385 aa8.04□□□□□ -1.12
TMEM258-201ENST00000257262 SLC25A23Q9BV35 468 aa8.04□□□□□ -1.12
TMEM258-201ENST00000257262 NTMT1Q9BV86 223 aa8.04□□□□□ -1.12
TMEM258-201ENST00000257262 NUDT9Q9BW91 350 aa8.04□□□□□ -1.12
TMEM258-201ENST00000257262 RBCK1Q9BYM8 510 aa8.04□□□□□ -1.12
TMEM258-201ENST00000257262 VN1R1Q9GZP7 353 aa8.04□□□□□ -1.12
TMEM258-201ENST00000257262 REXO4Q9GZR2 422 aaKnown RBP8.04□□□□□ -1.12
TMEM258-201ENST00000257262 ACTR8Q9H981 624 aa8.04□□□□□ -1.12
TMEM258-201ENST00000257262 PRM3Q9NNZ6 103 aa8.04□□□□□ -1.12
TMEM258-201ENST00000257262 MLXIPLQ9NP71 852 aa8.04□□□□□ -1.12
TMEM258-201ENST00000257262 SEMA4BQ9NPR2 832 aaPredicted RBP8.04□□□□□ -1.12
TMEM258-201ENST00000257262 PRDM7Q9NQW5 492 aa8.04□□□□□ -1.12
TMEM258-201ENST00000257262 FBXL4Q9UKA2 621 aa8.04□□□□□ -1.12
TMEM258-201ENST00000257262 RAB21Q9UL25 225 aa8.04□□□□□ -1.12
TMEM258-201ENST00000257262 EMCNQ9ULC0 261 aa8.04□□□□□ -1.12
TMEM258-201ENST00000257262 RNF11Q9Y3C5 154 aa8.04□□□□□ -1.12
TMEM258-201ENST00000257262 PCDHGA9Q9Y5G4 932 aaKnown RBP8.04□□□□□ -1.12
TMEM258-201ENST00000257262 LOC102723996A0A087X1L8 192 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 IGHV1-45A0A0A0MS14 117 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 NSG1A0A0A6YYJ2 146 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 A0A1B0GTL3 188 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 B8ZZF3 427 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 FAM227AF5H4B4 570 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 H0YIV9 168 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 SAP18O00422 153 aaKnown RBP8.03□□□□□ -1.12
TMEM258-201ENST00000257262 PPP6CO00743 305 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 UGDHO60701 494 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 B4GALT2O60909 372 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 GLRA3O75311 464 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 CDC123O75794 336 aaPredicted RBP8.03□□□□□ -1.12
TMEM258-201ENST00000257262 SUPT7LO94864 414 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 HPP00738 406 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 RPS17P08708 135 aaKnown RBP8.03□□□□□ -1.12
TMEM258-201ENST00000257262 C8orf89P0DMQ9 161 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 COX6A1P12074 109 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 ACPPP15309 386 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 KRT4P19013 534 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 TSPAN8P19075 237 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 IMPDH1P20839 514 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 ATP5F1P24539 256 aaPredicted RBP8.03□□□□□ -1.12
TMEM258-201ENST00000257262 ITGA3P26006 1051 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 HPDP32754 393 aaPredicted RBP8.03□□□□□ -1.12
TMEM258-201ENST00000257262 ARL1P40616 181 aaPredicted RBP8.03□□□□□ -1.12
TMEM258-201ENST00000257262 CCT5P48643 541 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 CCNG1P51959 295 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 CDH13P55290 713 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 SOX8P57073 446 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 RHAGQ02094 409 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 EEF1A2Q05639 463 aaKnown RBP8.03□□□□□ -1.12
TMEM258-201ENST00000257262 IFFO1Q0D2I5 559 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 Q0VFX4 171 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 AIMP2Q13155 320 aaKnown RBP8.03□□□□□ -1.12
TMEM258-201ENST00000257262 DDX39BQ13838 428 aaKnown RBP8.03□□□□□ -1.12
TMEM258-201ENST00000257262 ZRSR2Q15696 482 aaKnown RBP8.03□□□□□ -1.12
TMEM258-201ENST00000257262 LACTB2Q53H82 288 aaPredicted RBP8.03□□□□□ -1.12
TMEM258-201ENST00000257262 UNC50Q53HI1 259 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 ZNF678Q5SXM1 525 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 DEPDC1Q5TB30 811 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 TRIM40Q6P9F5 258 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 ABHD17CQ6PCB6 329 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 ASB18Q6ZVZ8 466 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 CHSY3Q70JA7 882 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 NDUFAF7Q7L592 441 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 UBE3DQ7Z6J8 389 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 MILR1Q7Z6M3 343 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 C4orf33Q8N1A6 199 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 L3MBTL4Q8NA19 623 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 PLPP5Q8NEB5 264 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 OR4F6Q8NGB9 312 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 HUS1BQ8NHY5 278 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 WDR20Q8TBZ3 569 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 TRPC4APQ8TEL6 797 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 METTL21AQ8WXB1 218 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 TBC1D20Q96BZ9 403 aa8.03□□□□□ -1.12
TMEM258-201ENST00000257262 CMTM7Q96FZ5 175 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms