RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 PMM1Q92871 262 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 GPER1Q99527 375 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 ULBP3Q9BZM4 244 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 TM7SF3Q9NS93 570 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 PPM1HQ9ULR3 514 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 WASF3Q9UPY6 502 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 BAIAP2Q9UQB8 552 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 RBM7Q9Y580 266 aaKnown RBP12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 A0A087WXM4 84 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 A8MT66 165 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 IQCF5A8MTL0 148 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 MKRN2OSH3BPM6 223 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 TFECO14948 347 aaPredicted RBP12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 NUAK1O60285 661 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 DBIP07108 87 aaKnown RBP12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 TMEM53Q6P2H8 277 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 RNF31Q96EP0 1072 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 PEBP4Q96S96 227 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 IL17CQ9P0M4 197 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 PTGFRNQ9P2B2 879 aa12.9□□□□□ -0.34
PRPF38A-201ENST00000257181 MYH4Q9Y623 1939 aa12.9□□□□□ -0.35
PRPF38A-201ENST00000257181 BTN3A3O00478 584 aa12.9□□□□□ -0.35
PRPF38A-201ENST00000257181 GLDCP23378 1020 aa12.9□□□□□ -0.35
PRPF38A-201ENST00000257181 OGDHQ02218 1023 aa12.9□□□□□ -0.35
PRPF38A-201ENST00000257181 RTN4RL1Q86UN2 441 aaPredicted RBP12.9□□□□□ -0.35
PRPF38A-201ENST00000257181 GIPC3Q8TF64 312 aa12.9□□□□□ -0.35
PRPF38A-201ENST00000257181 ELL3Q9HB65 397 aaPredicted RBP12.9□□□□□ -0.35
PRPF38A-201ENST00000257181 KLHL1Q9NR64 748 aa12.9□□□□□ -0.35
PRPF38A-201ENST00000257181 NFKBIL1Q9UBC1 381 aaPredicted RBP12.9□□□□□ -0.35
PRPF38A-201ENST00000257181 PHYHO14832 338 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 SDC3O75056 442 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 SCRG1O75711 98 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 MYOGP15173 224 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 RPS9P46781 194 aaKnown RBP12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 VASPP50552 380 aaPredicted RBP12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 MALLQ13021 153 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 ALKBH2Q6NS38 261 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 ZFAND4Q86XD8 727 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 C3orf58Q8NDZ4 430 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 SORCS1Q8WY21 1168 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 HAPLN2Q9GZV7 340 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 KLF11O14901 512 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 CD9P21926 228 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 TNFSF4P23510 183 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 MPSTP25325 297 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 COX10Q12887 443 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 ATG9BQ674R7 924 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 GLYATQ6IB77 296 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 SLC30A6Q6NXT4 461 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 SPATA6LQ8N4H0 392 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 JPH3Q8WXH2 748 aaPredicted RBP12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 PIF1Q9H611 641 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 IKZF2Q9UKS7 526 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 WDR45Q9Y484 360 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 CDC14CA4D256 554 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 H7BY64 318 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 PCDHGA12O60330 932 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 TNFAIP8O95379 198 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 SERPINA1P01009 418 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 TPMTP51580 245 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 MYBPC3Q14896 1274 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 TAB1Q15750 504 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 STEAP4Q687X5 459 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 NAIF1Q69YI7 327 aaPredicted RBP12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 FAM180AQ6UWF9 173 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 BMP8AQ7Z5Y6 402 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 TEX19Q8NA77 164 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 LPGAT1Q92604 370 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 PRAP1Q96NZ9 151 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 TMEM79Q9BSE2 394 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 GATA5Q9BWX5 397 aaPredicted RBP12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 ARNT2Q9HBZ2 717 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 OR1A2Q9Y585 309 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 BRWD3Q6RI45 1802 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 HTRA2O43464 458 aaPredicted RBP12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 PRLP01236 227 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 HSD11B1P28845 292 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 MC3RP41968 323 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 HK3P52790 923 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 RAB8AP61006 207 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 TMEM151BQ8IW70 566 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 ACOT12Q8WYK0 555 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 SEMA6CQ9H3T2 930 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 KIR3DX1Q9H7L2 352 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 FZD3Q9NPG1 666 aa12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 CFAP20Q9Y6A4 193 aaKnown RBP12.89□□□□□ -0.35
PRPF38A-201ENST00000257181 LOC730098B7Z3J9 87 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 FAM153BP0C7A2 387 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 NOVA1P51513 510 aaKnown RBP12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 GDF10P55107 478 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 CLRN1P58418 232 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 CTBSQ01459 385 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 SLC34A1Q06495 639 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 KLF10Q13118 480 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 GAS6Q14393 721 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 TMEM201Q5SNT2 666 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 CCSAPQ6IQ19 270 aaPredicted RBP12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 RNF168Q8IYW5 571 aaPredicted RBP12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 SLC22A15Q8IZD6 547 aa12.88□□□□□ -0.35
PRPF38A-201ENST00000257181 WDTC1Q8N5D0 677 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms