RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 GRIN3AQ8TCU5 1115 aa12.73□□□□□ -0.37
PCDHGA3-201ENST00000253812 PELOQ9BRX2 385 aaKnown RBP12.73□□□□□ -0.37
PCDHGA3-201ENST00000253812 SLC35A5Q9BS91 424 aa12.73□□□□□ -0.37
PCDHGA3-201ENST00000253812 REEP4Q9H6H4 257 aa12.73□□□□□ -0.37
PCDHGA3-201ENST00000253812 ZCCHC3Q9NUD5 404 aaKnown RBP12.73□□□□□ -0.37
PCDHGA3-201ENST00000253812 GLTPQ9NZD2 209 aa12.73□□□□□ -0.37
PCDHGA3-201ENST00000253812 PPP4R1LQ9P1A2 415 aa12.73□□□□□ -0.37
PCDHGA3-201ENST00000253812 FGF3P11487 239 aaPredicted RBP12.73□□□□□ -0.37
PCDHGA3-201ENST00000253812 NPRL3Q12980 569 aa12.73□□□□□ -0.37
PCDHGA3-201ENST00000253812 CDK10Q15131 360 aa12.73□□□□□ -0.37
PCDHGA3-201ENST00000253812 SPRED3Q2MJR0 410 aa12.73□□□□□ -0.37
PCDHGA3-201ENST00000253812 ARL14Q8N4G2 192 aa12.73□□□□□ -0.37
PCDHGA3-201ENST00000253812 OR8J3Q8NGG0 315 aa12.73□□□□□ -0.37
PCDHGA3-201ENST00000253812 CXorf40BQ96DE9 158 aa12.73□□□□□ -0.37
PCDHGA3-201ENST00000253812 MFFQ9GZY8 342 aa12.73□□□□□ -0.37
PCDHGA3-201ENST00000253812 MMP28Q9H239 520 aa12.73□□□□□ -0.37
PCDHGA3-201ENST00000253812 P2RX2Q9UBL9 471 aa12.73□□□□□ -0.37
PCDHGA3-201ENST00000253812 SLC27A6Q9Y2P4 619 aa12.73□□□□□ -0.37
PCDHGA3-201ENST00000253812 FAM208AQ9UK61 1670 aaKnown RBP12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 A0A1W2PQL4 384 aaPredicted RBP12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 L1CAMP32004 1257 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 KCNC4Q03721 635 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 HNRNPDQ14103 355 aaKnown RBP12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 TOMM20Q15388 145 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 FAM110CQ1W6H9 321 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 OR4F3Q6IEY1 312 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 CFAP77Q6ZQR2 320 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 BRSK1Q8TDC3 778 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 GPR22Q99680 433 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 FBXO10Q9UK96 956 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 A0A1B0GVM2 712 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 TCRBV7S3A2A0A539 114 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 KLRG2A4D1S0 409 aaPredicted RBP12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 ZNF670-ZNF695F2Z2N8 137 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 MT-CYBP00156 380 aaPredicted RBP12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 UNGP13051 313 aaPredicted RBP12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 GLP1RP43220 463 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 FLT3LGP49771 235 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 MECP2P51608 486 aaKnown RBP12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 CREMQ03060 361 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 EMX2Q04743 252 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 ST3GAL3Q11203 375 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 HACD2Q6Y1H2 254 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 ZNF584Q8IVC4 421 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 BEND7Q8N7W2 519 aaPredicted RBP12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 NIPA2Q8N8Q9 360 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 LPPQ93052 612 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 FN3KQ9H479 309 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 FAM120CQ9NX05 1096 aaKnown RBP12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 C2CD4BA6NLJ0 364 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 FCER2P06734 321 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 AKT2P31751 481 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 RPS5P46782 204 aaKnown RBP12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 BTG3Q14201 252 aaPredicted RBP12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 KCNJ11Q14654 390 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 SF3A2Q15428 464 aaKnown RBP12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 ZNF283Q8N7M2 679 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 YIPF7Q8N8F6 280 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 RHOXF1Q8NHV9 184 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 TESCQ96BS2 214 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 ADAD1Q96M93 576 aaKnown RBP12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 FERD3LQ96RJ6 166 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 OR51J1Q9H342 316 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 TMEM39AQ9NV64 488 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 FAM86C1Q9NVL1 165 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 VPS29Q9UBQ0 182 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 CCL22O00626 93 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 PCDH7O60245 1069 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 PRAMEF2O60811 474 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 ATG13O75143 517 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 RPP14O95059 124 aaKnown RBP12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 HOXC6P09630 235 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 SPAM1P38567 509 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 PBX3P40426 434 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 MRPS6P82932 125 aaKnown RBP12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 MLLT1Q03111 559 aaPredicted RBP12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 CBX2Q14781 532 aaPredicted RBP12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 NAPRTQ6XQN6 538 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 CXorf40AQ8TE69 158 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 NR4A3Q92570 626 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 RIPOR3Q96MK2 946 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 NUBP2Q9Y5Y2 271 aa12.72□□□□□ -0.37
PCDHGA3-201ENST00000253812 OR6C6A6NF89 314 aa12.71□□□□□ -0.37
PCDHGA3-201ENST00000253812 CILPO75339 1184 aa12.71□□□□□ -0.37
PCDHGA3-201ENST00000253812 IFNA5P01569 189 aa12.71□□□□□ -0.37
PCDHGA3-201ENST00000253812 UCHL1P09936 223 aa12.71□□□□□ -0.37
PCDHGA3-201ENST00000253812 HSD3B1P14060 373 aa12.71□□□□□ -0.37
PCDHGA3-201ENST00000253812 AVPR1BP47901 424 aa12.71□□□□□ -0.37
PCDHGA3-201ENST00000253812 GLUD2P49448 558 aa12.71□□□□□ -0.37
PCDHGA3-201ENST00000253812 CYCSP99999 105 aaKnown RBP12.71□□□□□ -0.37
PCDHGA3-201ENST00000253812 CYBRD1Q53TN4 286 aa12.71□□□□□ -0.37
PCDHGA3-201ENST00000253812 MINDY1Q8N5J2 469 aa12.71□□□□□ -0.37
PCDHGA3-201ENST00000253812 OSTF1Q92882 214 aa12.71□□□□□ -0.37
PCDHGA3-201ENST00000253812 OR10A4Q9H209 315 aa12.71□□□□□ -0.37
PCDHGA3-201ENST00000253812 COL1A1P02452 1464 aaPredicted RBP12.71□□□□□ -0.37
PCDHGA3-201ENST00000253812 AIPO00170 330 aa12.71□□□□□ -0.37
PCDHGA3-201ENST00000253812 FFAR2O15552 330 aa12.71□□□□□ -0.37
PCDHGA3-201ENST00000253812 CH25HO95992 272 aa12.71□□□□□ -0.37
PCDHGA3-201ENST00000253812 OR8U9P0C7N5 309 aa12.71□□□□□ -0.37
PCDHGA3-201ENST00000253812 DDX6P26196 483 aaKnown RBP eCLIP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms