RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 XPAP23025 273 aaPredicted RBP16.3■□□□□ 0.2
FOXA1-201ENST00000250448 S100A1P23297 94 aa16.3■□□□□ 0.2
FOXA1-201ENST00000250448 C21orf33P30042 268 aaPredicted RBP16.3■□□□□ 0.2
FOXA1-201ENST00000250448 IL12RB1P42701 662 aa16.3■□□□□ 0.2
FOXA1-201ENST00000250448 ABRQ12979 859 aa16.3■□□□□ 0.2
FOXA1-201ENST00000250448 BOP1Q14137 746 aaKnown RBP16.3■□□□□ 0.2
FOXA1-201ENST00000250448 LYPLAL1Q5VWZ2 237 aa16.3■□□□□ 0.2
FOXA1-201ENST00000250448 LRRC70Q7Z2Q7 622 aa16.3■□□□□ 0.2
FOXA1-201ENST00000250448 GPR155Q7Z3F1 870 aa16.3■□□□□ 0.2
FOXA1-201ENST00000250448 SLC46A3Q7Z3Q1 461 aa16.3■□□□□ 0.2
FOXA1-201ENST00000250448 EPYCQ99645 322 aa16.3■□□□□ 0.2
FOXA1-201ENST00000250448 HOXD1Q9GZZ0 328 aa16.3■□□□□ 0.2
FOXA1-201ENST00000250448 EHD1Q9H4M9 534 aa16.3■□□□□ 0.2
FOXA1-201ENST00000250448 NUP214P35658 2090 aaPredicted RBP16.3■□□□□ 0.2
FOXA1-201ENST00000250448 CXorf51AA0A1B0GTR3 108 aa16.3■□□□□ 0.2
FOXA1-201ENST00000250448 DSCR3O14972 297 aa16.3■□□□□ 0.2
FOXA1-201ENST00000250448 GTF2E2P29084 291 aaKnown RBP16.3■□□□□ 0.2
FOXA1-201ENST00000250448 SLC19A1P41440 591 aa16.3■□□□□ 0.2
FOXA1-201ENST00000250448 RPIAP49247 311 aa16.3■□□□□ 0.2
FOXA1-201ENST00000250448 SF3B4Q15427 424 aaKnown RBP eCLIP16.3■□□□□ 0.2
FOXA1-201ENST00000250448 C9orf64Q5T6V5 341 aa16.3■□□□□ 0.2
FOXA1-201ENST00000250448 Q6ZPB1 254 aaPredicted RBP16.3■□□□□ 0.2
FOXA1-201ENST00000250448 ZNF621Q6ZSS3 439 aa16.3■□□□□ 0.2
FOXA1-201ENST00000250448 KBTBD8Q8NFY9 601 aa16.3■□□□□ 0.2
FOXA1-201ENST00000250448 MYDGFQ969H8 173 aa16.3■□□□□ 0.2
FOXA1-201ENST00000250448 TPD52L3Q96J77 140 aa16.3■□□□□ 0.2
FOXA1-201ENST00000250448 KCNC2Q96PR1 638 aa16.3■□□□□ 0.2
FOXA1-201ENST00000250448 EBPLQ9BY08 206 aa16.3■□□□□ 0.2
FOXA1-201ENST00000250448 OBP2AQ9NY56 170 aa16.3■□□□□ 0.2
FOXA1-201ENST00000250448 CCDC59Q9P031 241 aaKnown RBP16.3■□□□□ 0.2
FOXA1-201ENST00000250448 PPIL1Q9Y3C6 166 aa16.3■□□□□ 0.2
FOXA1-201ENST00000250448 MAGEB17A8MXT2 336 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 UPK3BL1B0FP48 263 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 UPK3BL2E5RIL1 263 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 KAT7O95251 611 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 AMD1P17707 334 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 POLR2LP62875 67 aaKnown RBP16.29■□□□□ 0.2
FOXA1-201ENST00000250448 ZNF45Q02386 682 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 PRKCDQ05655 676 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 IQCCQ4KMZ1 466 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 ZNF805Q5CZA5 627 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 DESI1Q6ICB0 168 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 BRAT1Q6PJG6 821 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 CDADC1Q9BWV3 514 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 PLCXD1Q9NUJ7 323 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 KCTD5Q9NXV2 234 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 IFT52Q9Y366 437 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 MTCH2Q9Y6C9 303 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 PSMD11O00231 422 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 DPM1O60762 260 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 RPLP0P05388 317 aaKnown RBP16.29■□□□□ 0.2
FOXA1-201ENST00000250448 CDK1P06493 297 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 EPHX1P07099 455 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 PCSK2P16519 638 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 S100A5P33763 92 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 BMP8BP34820 402 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 GRK5P34947 590 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 GGT2P36268 569 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 CASP3P42574 277 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 SPINT3P49223 89 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 SEC13P55735 322 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 UGT8Q16880 541 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 HNRNPA1L2Q32P51 320 aaKnown RBP16.29■□□□□ 0.2
FOXA1-201ENST00000250448 ZNF648Q5T619 568 aaPredicted RBP16.29■□□□□ 0.2
FOXA1-201ENST00000250448 NOXRED1Q6NXP6 359 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 NEK5Q6P3R8 708 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 TTC23LQ6PF05 361 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 SYTL1Q8IYJ3 562 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 CACTIN-AS1Q8N1I8 211 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 DNAJC22Q8N4W6 341 aa16.29■□□□□ 0.2
FOXA1-201ENST00000250448 TRMT61BQ9BVS5 477 aaKnown RBP16.29■□□□□ 0.2
FOXA1-201ENST00000250448 NPIPB8E9PQR5 432 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 ACPPP15309 386 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 PRPS1L1P21108 318 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 WNT3P56703 355 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 MN1Q10571 1320 aaPredicted RBP16.28■□□□□ 0.2
FOXA1-201ENST00000250448 CDKL4Q5MAI5 379 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 SYT12Q8IV01 421 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 MMAAQ8IVH4 418 aaKnown RBP16.28■□□□□ 0.2
FOXA1-201ENST00000250448 PARP16Q8N5Y8 322 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 CSGALNACT1Q8TDX6 532 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 C7orf34Q96L11 122 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 TMPRSS11EQ9UL52 423 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 ZNF451Q9Y4E5 1061 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 DYRK3O43781 588 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 CPSF4O95639 269 aaKnown RBP16.28■□□□□ 0.2
FOXA1-201ENST00000250448 NKX2-5P52952 324 aaPredicted RBP16.28■□□□□ 0.2
FOXA1-201ENST00000250448 NXPE1Q8N323 547 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 SYNPOQ8N3V7 929 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 ARRDC3Q96B67 414 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 MIR1-1HGQ9H1L0 117 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 MOV10Q9HCE1 1003 aaKnown RBP16.28■□□□□ 0.2
FOXA1-201ENST00000250448 FKBP14Q9NWM8 211 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 LOC100506127A0A0U1RQW1 187 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 HAT1O14929 419 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 SCN2BO60939 215 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 CBSLP0DN79 551 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 ALOX12P18054 663 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 MAGP20916 626 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 RRM2P31350 389 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms