RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 STARD3Q14849 445 aa15.74■□□□□ 0.11
HOXD3-201ENST00000249440 SYT16Q17RD7 645 aa15.74■□□□□ 0.11
HOXD3-201ENST00000249440 ARHGAP15Q53QZ3 475 aa15.74■□□□□ 0.11
HOXD3-201ENST00000249440 CCDC80Q76M96 950 aa15.74■□□□□ 0.11
HOXD3-201ENST00000249440 DNAJC22Q8N4W6 341 aa15.74■□□□□ 0.11
HOXD3-201ENST00000249440 OR4C15Q8NGM1 316 aa15.74■□□□□ 0.11
HOXD3-201ENST00000249440 NFKBIDQ8NI38 313 aa15.74■□□□□ 0.11
HOXD3-201ENST00000249440 BTBD2Q9BX70 525 aa15.74■□□□□ 0.11
HOXD3-201ENST00000249440 DCSTAMPQ9H295 470 aa15.74■□□□□ 0.11
HOXD3-201ENST00000249440 DMRT3Q9NQL9 472 aa15.74■□□□□ 0.11
HOXD3-201ENST00000249440 GULP1Q9UBP9 304 aa15.74■□□□□ 0.11
HOXD3-201ENST00000249440 PIPSLA2A3N6 862 aa15.73■□□□□ 0.11
HOXD3-201ENST00000249440 PSMD11O00231 422 aa15.73■□□□□ 0.11
HOXD3-201ENST00000249440 AIREO43918 545 aa15.73■□□□□ 0.11
HOXD3-201ENST00000249440 CDK1P06493 297 aa15.73■□□□□ 0.11
HOXD3-201ENST00000249440 UGT2B10P36537 528 aa15.73■□□□□ 0.11
HOXD3-201ENST00000249440 IDH2P48735 452 aaKnown RBP15.73■□□□□ 0.11
HOXD3-201ENST00000249440 CDK6Q00534 326 aa15.73■□□□□ 0.11
HOXD3-201ENST00000249440 IFITM3Q01628 133 aa15.73■□□□□ 0.11
HOXD3-201ENST00000249440 TEKQ02763 1124 aa15.73■□□□□ 0.11
HOXD3-201ENST00000249440 SFSWAPQ12872 951 aaKnown RBP15.73■□□□□ 0.11
HOXD3-201ENST00000249440 ZNF630Q2M218 657 aaPredicted RBP15.73■□□□□ 0.11
HOXD3-201ENST00000249440 ZNF605Q86T29 641 aa15.73■□□□□ 0.11
HOXD3-201ENST00000249440 LGI4Q8N135 537 aa15.73■□□□□ 0.11
HOXD3-201ENST00000249440 DENND6BQ8NEG7 585 aa15.73■□□□□ 0.11
HOXD3-201ENST00000249440 MCFD2Q8NI22 146 aa15.73■□□□□ 0.11
HOXD3-201ENST00000249440 PROX1Q92786 737 aa15.73■□□□□ 0.11
HOXD3-201ENST00000249440 ITPKCQ96DU7 683 aa15.73■□□□□ 0.11
HOXD3-201ENST00000249440 DSN1Q9H410 356 aa15.73■□□□□ 0.11
HOXD3-201ENST00000249440 ZNF556Q9HAH1 456 aa15.73■□□□□ 0.11
HOXD3-201ENST00000249440 MYNNQ9NPC7 610 aa15.73■□□□□ 0.11
HOXD3-201ENST00000249440 TAS2R9Q9NYW1 312 aa15.73■□□□□ 0.11
HOXD3-201ENST00000249440 PNMA8BQ9ULN7 279 aaPredicted RBP15.73■□□□□ 0.11
HOXD3-201ENST00000249440 PCDHGA2Q9Y5H1 932 aa15.73■□□□□ 0.11
HOXD3-201ENST00000249440 MTCL1Q9Y4B5 1905 aaKnown RBP15.73■□□□□ 0.11
HOXD3-201ENST00000249440 CHI3L1P36222 383 aaPredicted RBP15.73■□□□□ 0.11
HOXD3-201ENST00000249440 MC1RQ01726 317 aa15.73■□□□□ 0.11
HOXD3-201ENST00000249440 TIGD6Q17RP2 521 aa15.73■□□□□ 0.11
HOXD3-201ENST00000249440 EXOC3L2Q2M3D2 409 aa15.73■□□□□ 0.11
HOXD3-201ENST00000249440 CRB2Q5IJ48 1285 aa15.73■□□□□ 0.11
HOXD3-201ENST00000249440 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.73■□□□□ 0.11
HOXD3-201ENST00000249440 C16orf78Q8WTQ4 265 aa15.73■□□□□ 0.11
HOXD3-201ENST00000249440 GGHQ92820 318 aa15.73■□□□□ 0.11
HOXD3-201ENST00000249440 CIDECQ96AQ7 238 aaPredicted RBP15.73■□□□□ 0.11
HOXD3-201ENST00000249440 MTERF3Q96E29 417 aa15.73■□□□□ 0.11
HOXD3-201ENST00000249440 NIPSNAP1Q9BPW8 284 aa15.73■□□□□ 0.11
HOXD3-201ENST00000249440 SGPP1Q9BX95 441 aa15.73■□□□□ 0.11
HOXD3-201ENST00000249440 ZCCHC2Q9C0B9 1178 aaKnown RBP15.73■□□□□ 0.11
HOXD3-201ENST00000249440 OR51B5Q9H339 312 aa15.73■□□□□ 0.11
HOXD3-201ENST00000249440 AMBNQ9NP70 447 aa15.73■□□□□ 0.11
HOXD3-201ENST00000249440 ITM2CQ9NQX7 267 aa15.73■□□□□ 0.11
HOXD3-201ENST00000249440 RLIMQ9NVW2 624 aa15.73■□□□□ 0.11
HOXD3-201ENST00000249440 FKBP14Q9NWM8 211 aa15.73■□□□□ 0.11
HOXD3-201ENST00000249440 SAP18O00422 153 aaKnown RBP15.72■□□□□ 0.11
HOXD3-201ENST00000249440 WEE1P30291 646 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 EPHA5P54756 1037 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 TAS2R50P59544 299 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 SLC5A12Q1EHB4 618 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 ZNF658BQ4V348 819 aaPredicted RBP15.72■□□□□ 0.11
HOXD3-201ENST00000249440 BCL7AQ4VC05 210 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 FAM71E1Q6IPT2 247 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 RNF130Q86XS8 419 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 CCDC103Q8IW40 242 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 OR9A1PQ8NGU1 263 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 SLC5A11Q8WWX8 675 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 GEMIN6Q8WXD5 167 aaKnown RBP15.72■□□□□ 0.11
HOXD3-201ENST00000249440 WRAP53Q9BUR4 548 aaKnown RBP15.72■□□□□ 0.11
HOXD3-201ENST00000249440 MMP27Q9H306 513 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 ZBTB20Q9HC78 741 aaPredicted RBP15.72■□□□□ 0.11
HOXD3-201ENST00000249440 SH2B3Q9UQQ2 575 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 MAP4K5Q9Y4K4 846 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 M0R082 166 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 MOSPD3O75425 235 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 KRT75O95678 551 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 PTPN2P17706 415 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 TGM1P22735 817 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 TGFBR1P36897 503 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 SLC19A1P41440 591 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 CTSKP43235 329 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 PPP5CP53041 499 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 ZNF77Q15935 545 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 ZNF404Q494X3 552 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 UNC5DQ6UXZ4 953 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 PARS2Q7L3T8 475 aaKnown RBP15.72■□□□□ 0.11
HOXD3-201ENST00000249440 SNX29P2Q8IUI4 249 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 TRAPPC5Q8IUR0 188 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 METTL4Q8N3J2 472 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 KIAA1958Q8N8K9 716 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 KLHL23Q8NBE8 558 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 UTP15Q8TED0 518 aaKnown RBP15.72■□□□□ 0.11
HOXD3-201ENST00000249440 DTD2Q96FN9 168 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 DACH2Q96NX9 599 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 MARK1Q9P0L2 795 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 ENOPH1Q9UHY7 261 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 PAIP2BQ9ULR5 123 aaKnown RBP15.72■□□□□ 0.11
HOXD3-201ENST00000249440 ITM2BQ9Y287 266 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 FAM32AQ9Y421 112 aaKnown RBP15.72■□□□□ 0.11
HOXD3-201ENST00000249440 WNT6Q9Y6F9 365 aa15.72■□□□□ 0.11
HOXD3-201ENST00000249440 A0A1W2PRB8 838 aa15.71■□□□□ 0.11
HOXD3-201ENST00000249440 EFCAB14O75071 495 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms