RNA–Protein interactions for RNA: ENST00000239446.5

PCDHB10-201, Transcript of protocadherin beta 10, humanhuman

APPRIS P1 BASIC

Gene PCDHB10, Length 3,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB10-201ENST00000239446 GABARAPL2P60520 117 aa13.09□□□□□ -0.31
PCDHB10-201ENST00000239446 CBX2Q14781 532 aaPredicted RBP13.09□□□□□ -0.31
PCDHB10-201ENST00000239446 C11orf96Q7Z7L8 435 aa13.09□□□□□ -0.31
PCDHB10-201ENST00000239446 CALHM3Q86XJ0 350 aa13.09□□□□□ -0.31
PCDHB10-201ENST00000239446 MEX3DQ86XN8 651 aaKnown RBP13.09□□□□□ -0.31
PCDHB10-201ENST00000239446 NFKBIDQ8NI38 313 aa13.09□□□□□ -0.31
PCDHB10-201ENST00000239446 HCAR2Q8TDS4 363 aa13.09□□□□□ -0.31
PCDHB10-201ENST00000239446 YIPF6Q96EC8 236 aa13.09□□□□□ -0.31
PCDHB10-201ENST00000239446 CMTM7Q96FZ5 175 aa13.09□□□□□ -0.31
PCDHB10-201ENST00000239446 NIPSNAP1Q9BPW8 284 aa13.09□□□□□ -0.31
PCDHB10-201ENST00000239446 TM9SF3Q9HD45 589 aa13.09□□□□□ -0.31
PCDHB10-201ENST00000239446 SPG21Q9NZD8 308 aa13.09□□□□□ -0.31
PCDHB10-201ENST00000239446 NUFIP1Q9UHK0 495 aaKnown RBP13.09□□□□□ -0.31
PCDHB10-201ENST00000239446 DUSP12Q9UNI6 340 aa13.09□□□□□ -0.31
PCDHB10-201ENST00000239446 DNMT3AQ9Y6K1 912 aaPredicted RBP13.09□□□□□ -0.31
PCDHB10-201ENST00000239446 ISPDA4D126 451 aa13.08□□□□□ -0.31
PCDHB10-201ENST00000239446 TGM5O43548 720 aa13.08□□□□□ -0.31
PCDHB10-201ENST00000239446 WBP4O75554 376 aaKnown RBP13.08□□□□□ -0.31
PCDHB10-201ENST00000239446 ATP1B2P14415 290 aaPredicted RBP13.08□□□□□ -0.31
PCDHB10-201ENST00000239446 RPS3P23396 243 aaKnown RBP eCLIP13.08□□□□□ -0.31
PCDHB10-201ENST00000239446 MAPK1P28482 360 aa13.08□□□□□ -0.31
PCDHB10-201ENST00000239446 GRK5P34947 590 aa13.08□□□□□ -0.31
PCDHB10-201ENST00000239446 GRK3P35626 688 aa13.08□□□□□ -0.31
PCDHB10-201ENST00000239446 RECQLP46063 649 aaPredicted RBP13.08□□□□□ -0.31
PCDHB10-201ENST00000239446 TIGD6Q17RP2 521 aa13.08□□□□□ -0.31
PCDHB10-201ENST00000239446 ARMC4Q5T2S8 1044 aa13.08□□□□□ -0.31
PCDHB10-201ENST00000239446 ZNF438Q7Z4V0 828 aa13.08□□□□□ -0.31
PCDHB10-201ENST00000239446 ZNF740Q8NDX6 193 aa13.08□□□□□ -0.31
PCDHB10-201ENST00000239446 MED30Q96HR3 178 aa13.08□□□□□ -0.31
PCDHB10-201ENST00000239446 PAWRQ96IZ0 340 aaKnown RBP13.08□□□□□ -0.31
PCDHB10-201ENST00000239446 LINC00597Q9H2U6 94 aa13.08□□□□□ -0.31
PCDHB10-201ENST00000239446 TAS2R9Q9NYW1 312 aa13.08□□□□□ -0.31
PCDHB10-201ENST00000239446 RNF6Q9Y252 685 aa13.08□□□□□ -0.31
PCDHB10-201ENST00000239446 KLHL20Q9Y2M5 609 aa13.08□□□□□ -0.31
PCDHB10-201ENST00000239446 PCDHGB6Q9Y5F9 930 aa13.08□□□□□ -0.31
PCDHB10-201ENST00000239446 CFAP20Q9Y6A4 193 aaKnown RBP13.08□□□□□ -0.31
PCDHB10-201ENST00000239446 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 RFXAPO00287 272 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 CTDSP2O14595 271 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 APOL3O95236 402 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 PTTG1O95997 202 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 CSF2P04141 144 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 C8AP07357 584 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 HTR3AP46098 478 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 SLAMF1Q13291 335 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 Q5BKY6 102 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 C22orf39Q6P5X5 142 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 TMEM159Q96B96 161 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 IL17FQ96PD4 163 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 PHOX2BQ99453 314 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 PKP4Q99569 1192 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 C11orf16Q9NQ32 467 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 STMN3Q9NZ72 180 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 RPS6KA6Q9UK32 745 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 SAGE2PA6NJ88 616 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 PRPS1L1P21108 318 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 CHI3L1P36222 383 aaPredicted RBP13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 WNT3P56703 355 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 PFN3P60673 137 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 CHRNEQ04844 493 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 RFX4Q33E94 735 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 LEXMQ3ZCV2 418 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 ZNF385BQ569K4 471 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 KDM4DQ6B0I6 523 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 ASTLQ6HA08 431 aaPredicted RBP13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 AGTRAPQ6RW13 159 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 BCDIN3DQ7Z5W3 292 aaKnown RBP13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 SPERTQ8NA61 448 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 OR10G2Q8NGC3 310 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 VANGL1Q8TAA9 524 aaPredicted RBP13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 ASB11Q8WXH4 323 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 CCDC120Q96HB5 630 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 RDH12Q96NR8 316 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 SLC29A3Q9BZD2 475 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 FBXL12Q9NXK8 326 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 THSD7BQ9C0I4 1608 aa13.08□□□□□ -0.32
PCDHB10-201ENST00000239446 RTCAO00442 366 aaKnown RBP13.07□□□□□ -0.32
PCDHB10-201ENST00000239446 GFRA2O00451 464 aa13.07□□□□□ -0.32
PCDHB10-201ENST00000239446 SCAMP1O15126 338 aa13.07□□□□□ -0.32
PCDHB10-201ENST00000239446 SLC16A6O15403 523 aa13.07□□□□□ -0.32
PCDHB10-201ENST00000239446 TLL1O43897 1013 aa13.07□□□□□ -0.32
PCDHB10-201ENST00000239446 IGFBP1P08833 259 aaPredicted RBP13.07□□□□□ -0.32
PCDHB10-201ENST00000239446 CKMT1AP12532 417 aa13.07□□□□□ -0.32
PCDHB10-201ENST00000239446 PTNP21246 168 aa13.07□□□□□ -0.32
PCDHB10-201ENST00000239446 EXOC3L2Q2M3D2 409 aa13.07□□□□□ -0.32
PCDHB10-201ENST00000239446 GPR33Q49SQ1 333 aa13.07□□□□□ -0.32
PCDHB10-201ENST00000239446 ARSIQ5FYB1 569 aa13.07□□□□□ -0.32
PCDHB10-201ENST00000239446 LRIF1Q5T3J3 769 aa13.07□□□□□ -0.32
PCDHB10-201ENST00000239446 TPGS2Q68CL5 300 aa13.07□□□□□ -0.32
PCDHB10-201ENST00000239446 SYCE2Q6PIF2 218 aa13.07□□□□□ -0.32
PCDHB10-201ENST00000239446 ZNF517Q6ZMY9 492 aaPredicted RBP13.07□□□□□ -0.32
PCDHB10-201ENST00000239446 LGI4Q8N135 537 aa13.07□□□□□ -0.32
PCDHB10-201ENST00000239446 SLC39A11Q8N1S5 342 aa13.07□□□□□ -0.32
PCDHB10-201ENST00000239446 AMER2Q8N7J2 671 aa13.07□□□□□ -0.32
PCDHB10-201ENST00000239446 HUS1BQ8NHY5 278 aa13.07□□□□□ -0.32
PCDHB10-201ENST00000239446 TCEAL4Q96EI5 215 aa13.07□□□□□ -0.32
PCDHB10-201ENST00000239446 VPS35Q96QK1 796 aa13.07□□□□□ -0.32
PCDHB10-201ENST00000239446 GBF1Q92538 1859 aa13.07□□□□□ -0.32
PCDHB10-201ENST00000239446 PLXNA4Q9HCM2 1894 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms