RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 SLC32A1Q9H598 525 aa19.74■□□□□ 0.75
SNX3-201ENST00000230085 ZDHHC4Q9NPG8 344 aa19.74■□□□□ 0.75
SNX3-201ENST00000230085 SPASTQ9UBP0 616 aa19.74■□□□□ 0.75
SNX3-201ENST00000230085 VPS51Q9UID3 782 aa19.74■□□□□ 0.75
SNX3-201ENST00000230085 PCDHGB6Q9Y5F9 930 aa19.74■□□□□ 0.75
SNX3-201ENST00000230085 IQCF5A8MTL0 148 aa19.73■□□□□ 0.75
SNX3-201ENST00000230085 DLGAP3O95886 979 aa19.73■□□□□ 0.75
SNX3-201ENST00000230085 EPORP19235 508 aa19.73■□□□□ 0.75
SNX3-201ENST00000230085 PPIBP23284 216 aaKnown RBP19.73■□□□□ 0.75
SNX3-201ENST00000230085 EPHA2P29317 976 aa19.73■□□□□ 0.75
SNX3-201ENST00000230085 CDKN2CP42773 168 aa19.73■□□□□ 0.75
SNX3-201ENST00000230085 KIR3DL1P43629 444 aa19.73■□□□□ 0.75
SNX3-201ENST00000230085 PTPN5P54829 565 aa19.73■□□□□ 0.75
SNX3-201ENST00000230085 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.73■□□□□ 0.75
SNX3-201ENST00000230085 TIMM50Q3ZCQ8 353 aa19.73■□□□□ 0.75
SNX3-201ENST00000230085 ZNF544Q6NX49 715 aa19.73■□□□□ 0.75
SNX3-201ENST00000230085 CCBE1Q6UXH8 406 aaPredicted RBP19.73■□□□□ 0.75
SNX3-201ENST00000230085 NUDT18Q6ZVK8 323 aa19.73■□□□□ 0.75
SNX3-201ENST00000230085 ZNF367Q7RTV3 350 aa19.73■□□□□ 0.75
SNX3-201ENST00000230085 ATG16L2Q8NAA4 619 aa19.73■□□□□ 0.75
SNX3-201ENST00000230085 HSH2DQ96JZ2 352 aa19.73■□□□□ 0.75
SNX3-201ENST00000230085 NELL2Q99435 816 aa19.73■□□□□ 0.75
SNX3-201ENST00000230085 CHST8Q9H2A9 424 aa19.73■□□□□ 0.75
SNX3-201ENST00000230085 LMAN1LQ9HAT1 526 aa19.73■□□□□ 0.75
SNX3-201ENST00000230085 NEK6Q9HC98 313 aa19.73■□□□□ 0.75
SNX3-201ENST00000230085 SIRT5Q9NXA8 310 aa19.73■□□□□ 0.75
SNX3-201ENST00000230085 HCN2Q9UL51 889 aa19.73■□□□□ 0.75
SNX3-201ENST00000230085 MAPRE3Q9UPY8 281 aa19.73■□□□□ 0.75
SNX3-201ENST00000230085 CORO2BQ9UQ03 480 aa19.73■□□□□ 0.75
SNX3-201ENST00000230085 CFL2Q9Y281 166 aa19.73■□□□□ 0.75
SNX3-201ENST00000230085 LYVE1Q9Y5Y7 322 aa19.73■□□□□ 0.75
SNX3-201ENST00000230085 CLIC1O00299 241 aa19.72■□□□□ 0.75
SNX3-201ENST00000230085 APOA1P02647 267 aa19.72■□□□□ 0.75
SNX3-201ENST00000230085 TNFRSF4P43489 277 aa19.72■□□□□ 0.75
SNX3-201ENST00000230085 GPR33Q49SQ1 333 aa19.72■□□□□ 0.75
SNX3-201ENST00000230085 GDPD3Q7L5L3 318 aa19.72■□□□□ 0.75
SNX3-201ENST00000230085 SERPINA9Q86WD7 417 aa19.72■□□□□ 0.75
SNX3-201ENST00000230085 SLC7A5P1Q8MH63 180 aa19.72■□□□□ 0.75
SNX3-201ENST00000230085 DEPDC4Q8N2C3 294 aa19.72■□□□□ 0.75
SNX3-201ENST00000230085 CYB5D2Q8WUJ1 264 aa19.72■□□□□ 0.75
SNX3-201ENST00000230085 HTRA1Q92743 480 aa19.72■□□□□ 0.75
SNX3-201ENST00000230085 EGFL8Q99944 293 aa19.72■□□□□ 0.75
SNX3-201ENST00000230085 SPON2Q9BUD6 331 aa19.72■□□□□ 0.75
SNX3-201ENST00000230085 C3orf14Q9HBI5 128 aa19.72■□□□□ 0.75
SNX3-201ENST00000230085 CCDC177Q9NQR7 707 aaPredicted RBP19.72■□□□□ 0.75
SNX3-201ENST00000230085 SIT1Q9Y3P8 196 aa19.72■□□□□ 0.75
SNX3-201ENST00000230085 PCDHGC4Q9Y5F7 938 aa19.72■□□□□ 0.75
SNX3-201ENST00000230085 AGAP14A8MT82 685 aa19.72■□□□□ 0.75
SNX3-201ENST00000230085 MYO1GB0I1T2 1018 aa19.72■□□□□ 0.75
SNX3-201ENST00000230085 PI15O43692 258 aa19.72■□□□□ 0.75
SNX3-201ENST00000230085 EPN2O95208 641 aa19.72■□□□□ 0.75
SNX3-201ENST00000230085 PDYNP01213 254 aa19.72■□□□□ 0.75
SNX3-201ENST00000230085 POLR2EP19388 210 aaKnown RBP19.72■□□□□ 0.75
SNX3-201ENST00000230085 CTSOP43234 321 aaPredicted RBP19.72■□□□□ 0.75
SNX3-201ENST00000230085 KIR2DL1P43626 348 aaPredicted RBP19.72■□□□□ 0.75
SNX3-201ENST00000230085 SLC14A1Q13336 389 aa19.72■□□□□ 0.75
SNX3-201ENST00000230085 C2orf27AQ580R0 203 aa19.72■□□□□ 0.75
SNX3-201ENST00000230085 CBARPQ8N350 705 aaPredicted RBP19.72■□□□□ 0.75
SNX3-201ENST00000230085 OR6F1Q8NGZ6 308 aa19.72■□□□□ 0.75
SNX3-201ENST00000230085 LILRB4Q8NHJ6 448 aa19.72■□□□□ 0.75
SNX3-201ENST00000230085 WFIKKN2Q8TEU8 576 aa19.72■□□□□ 0.75
SNX3-201ENST00000230085 CDCA4Q9BXL8 241 aa19.72■□□□□ 0.75
SNX3-201ENST00000230085 RMI1Q9H9A7 625 aa19.72■□□□□ 0.75
SNX3-201ENST00000230085 LHX3Q9UBR4 397 aa19.72■□□□□ 0.75
SNX3-201ENST00000230085 ACTL7AQ9Y615 435 aa19.72■□□□□ 0.75
SNX3-201ENST00000230085 KMOO15229 486 aa19.71■□□□□ 0.75
SNX3-201ENST00000230085 SCO2O43819 266 aa19.71■□□□□ 0.75
SNX3-201ENST00000230085 PGLSO95336 258 aa19.71■□□□□ 0.75
SNX3-201ENST00000230085 CD160O95971 181 aa19.71■□□□□ 0.75
SNX3-201ENST00000230085 DCNP07585 359 aaKnown RBP19.71■□□□□ 0.75
SNX3-201ENST00000230085 ANXA5P08758 320 aa19.71■□□□□ 0.75
SNX3-201ENST00000230085 ANXA8P13928 327 aa19.71■□□□□ 0.75
SNX3-201ENST00000230085 TIE1P35590 1138 aa19.71■□□□□ 0.75
SNX3-201ENST00000230085 PCDH1Q08174 1060 aa19.71■□□□□ 0.75
SNX3-201ENST00000230085 ZCCHC8Q6NZY4 707 aaKnown RBP19.71■□□□□ 0.75
SNX3-201ENST00000230085 Q6ZS52 159 aa19.71■□□□□ 0.75
SNX3-201ENST00000230085 FAM124AQ86V42 546 aa19.71■□□□□ 0.75
SNX3-201ENST00000230085 ZNF675Q8TD23 568 aa19.71■□□□□ 0.75
SNX3-201ENST00000230085 GGHQ92820 318 aa19.71■□□□□ 0.75
SNX3-201ENST00000230085 EID2BQ96D98 161 aa19.71■□□□□ 0.75
SNX3-201ENST00000230085 RACGAP1Q9H0H5 632 aa19.71■□□□□ 0.75
SNX3-201ENST00000230085 FBXL12Q9NXK8 326 aa19.71■□□□□ 0.75
SNX3-201ENST00000230085 CNOT2Q9NZN8 540 aaKnown RBP19.71■□□□□ 0.75
SNX3-201ENST00000230085 AASSQ9UDR5 926 aa19.71■□□□□ 0.75
SNX3-201ENST00000230085 CBX4O00257 560 aa19.7■□□□□ 0.74
SNX3-201ENST00000230085 ADAMDEC1O15204 470 aa19.7■□□□□ 0.74
SNX3-201ENST00000230085 UGT2B17O75795 530 aa19.7■□□□□ 0.74
SNX3-201ENST00000230085 SPNP16150 400 aa19.7■□□□□ 0.74
SNX3-201ENST00000230085 ITGALP20701 1170 aa19.7■□□□□ 0.74
SNX3-201ENST00000230085 ACRV1P26436 265 aa19.7■□□□□ 0.74
SNX3-201ENST00000230085 ALDH9A1P49189 494 aa19.7■□□□□ 0.74
SNX3-201ENST00000230085 RGS6P49758 472 aa19.7■□□□□ 0.74
SNX3-201ENST00000230085 WNT3P56703 355 aa19.7■□□□□ 0.74
SNX3-201ENST00000230085 KCNJ10P78508 379 aa19.7■□□□□ 0.74
SNX3-201ENST00000230085 LRRC74AQ0VAA2 488 aa19.7■□□□□ 0.74
SNX3-201ENST00000230085 DMC1Q14565 340 aa19.7■□□□□ 0.74
SNX3-201ENST00000230085 CAMKMTQ7Z624 323 aa19.7■□□□□ 0.74
SNX3-201ENST00000230085 UBQLNLQ8IYU4 475 aa19.7■□□□□ 0.74
SNX3-201ENST00000230085 FAM83FQ8NEG4 500 aaPredicted RBP19.7■□□□□ 0.74
SNX3-201ENST00000230085 TMCO6Q96DC7 493 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms