RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 PSMA8Q8TAA3 256 aa15.6■□□□□ 0.09
LTBR-201ENST00000228918 ZNF675Q8TD23 568 aa15.6■□□□□ 0.09
LTBR-201ENST00000228918 IRF7Q92985 503 aa15.6■□□□□ 0.09
LTBR-201ENST00000228918 MRGPRX3Q96LB0 322 aa15.6■□□□□ 0.09
LTBR-201ENST00000228918 ZBP1Q9H171 429 aa15.6■□□□□ 0.09
LTBR-201ENST00000228918 EHD1Q9H4M9 534 aa15.6■□□□□ 0.09
LTBR-201ENST00000228918 PRDM8Q9NQV8 689 aa15.6■□□□□ 0.09
LTBR-201ENST00000228918 GPR83Q9NYM4 423 aa15.6■□□□□ 0.09
LTBR-201ENST00000228918 GULP1Q9UBP9 304 aa15.6■□□□□ 0.09
LTBR-201ENST00000228918 FOXE1O00358 373 aaPredicted RBP15.59■□□□□ 0.09
LTBR-201ENST00000228918 GPR37L1O60883 481 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 C1orf105O95561 183 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 STSP08842 583 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 ITGA2P17301 1181 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 S100A1P23297 94 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 ZNF658BQ4V348 819 aaPredicted RBP15.59■□□□□ 0.09
LTBR-201ENST00000228918 ZNF605Q86T29 641 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 LAS2Q8IYD9 372 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 SYTL1Q8IYJ3 562 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 GPR65Q8IYL9 337 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 FBXO15Q8NCQ5 510 aaPredicted RBP15.59■□□□□ 0.09
LTBR-201ENST00000228918 OR9Q2Q8NGE9 314 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 CYB5D2Q8WUJ1 264 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 GEMIN6Q8WXD5 167 aaKnown RBP15.59■□□□□ 0.09
LTBR-201ENST00000228918 SORCS1Q8WY21 1168 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 PPCDCQ96CD2 204 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 COL21A1Q96P44 957 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 A3GALT2U3KPV4 340 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 KIAA1549LQ6ZVL6 1849 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 MTCL1Q9Y4B5 1905 aaKnown RBP15.59■□□□□ 0.09
LTBR-201ENST00000228918 PIPSLA2A3N6 862 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 AGAP5A6NIR3 686 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 H3BM21 787 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 J3KTA2 159 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 ZNF197O14709 1029 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 UPK1BO75841 260 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 RPLP0P05388 317 aaKnown RBP15.59■□□□□ 0.09
LTBR-201ENST00000228918 MMP12P39900 470 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 XCR1P46094 333 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 LIMS1P48059 325 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 PRIM2P49643 509 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 CDK6Q00534 326 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 FBXO43Q4G163 708 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 CRB2Q5IJ48 1285 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 C10orf62Q5T681 223 aaPredicted RBP15.59■□□□□ 0.09
LTBR-201ENST00000228918 TUBA3EQ6PEY2 450 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 LILRA6Q6PI73 481 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 CCDC149Q6ZUS6 474 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.59■□□□□ 0.09
LTBR-201ENST00000228918 WDR48Q8TAF3 677 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 UTP15Q8TED0 518 aaKnown RBP15.59■□□□□ 0.09
LTBR-201ENST00000228918 C16orf78Q8WTQ4 265 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 AP2M1Q96CW1 435 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 EFCAB11Q9BUY7 163 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 NXF2Q9GZY0 626 aaKnown RBP15.59■□□□□ 0.09
LTBR-201ENST00000228918 MYNNQ9NPC7 610 aa15.59■□□□□ 0.09
LTBR-201ENST00000228918 TAF4O00268 1085 aa15.58■□□□□ 0.08
LTBR-201ENST00000228918 DSCR3O14972 297 aa15.58■□□□□ 0.08
LTBR-201ENST00000228918 KLHL18O94889 574 aa15.58■□□□□ 0.08
LTBR-201ENST00000228918 PTHP01270 115 aa15.58■□□□□ 0.08
LTBR-201ENST00000228918 NPPBP16860 134 aa15.58■□□□□ 0.08
LTBR-201ENST00000228918 XPAP23025 273 aaPredicted RBP15.58■□□□□ 0.08
LTBR-201ENST00000228918 RPL3P39023 403 aaKnown RBP15.58■□□□□ 0.08
LTBR-201ENST00000228918 IRF3Q14653 427 aa15.58■□□□□ 0.08
LTBR-201ENST00000228918 COLEC12Q5KU26 742 aa15.58■□□□□ 0.08
LTBR-201ENST00000228918 THOC7Q6I9Y2 204 aaKnown RBP15.58■□□□□ 0.08
LTBR-201ENST00000228918 FAM71E1Q6IPT2 247 aa15.58■□□□□ 0.08
LTBR-201ENST00000228918 TRIM40Q6P9F5 258 aa15.58■□□□□ 0.08
LTBR-201ENST00000228918 RNF130Q86XS8 419 aa15.58■□□□□ 0.08
LTBR-201ENST00000228918 LYSMD2Q8IV50 215 aa15.58■□□□□ 0.08
LTBR-201ENST00000228918 MTG2Q9H4K7 406 aa15.58■□□□□ 0.08
LTBR-201ENST00000228918 TRIM39Q9HCM9 518 aa15.58■□□□□ 0.08
LTBR-201ENST00000228918 SPHK2Q9NRA0 654 aa15.58■□□□□ 0.08
LTBR-201ENST00000228918 HCFC1R1Q9NWW0 138 aa15.58■□□□□ 0.08
LTBR-201ENST00000228918 IL36AQ9UHA7 158 aa15.58■□□□□ 0.08
LTBR-201ENST00000228918 DYRK1BQ9Y463 629 aa15.58■□□□□ 0.08
LTBR-201ENST00000228918 KIF26AQ9ULI4 1882 aaPredicted RBP15.58■□□□□ 0.08
LTBR-201ENST00000228918 PRAMEF33A0A0G2JMD5 474 aa15.57■□□□□ 0.08
LTBR-201ENST00000228918 ISPDA4D126 451 aa15.57■□□□□ 0.08
LTBR-201ENST00000228918 SAP18O00422 153 aaKnown RBP15.57■□□□□ 0.08
LTBR-201ENST00000228918 CCL16O15467 120 aa15.57■□□□□ 0.08
LTBR-201ENST00000228918 TLL1O43897 1013 aa15.57■□□□□ 0.08
LTBR-201ENST00000228918 PRAMEF10O60809 474 aa15.57■□□□□ 0.08
LTBR-201ENST00000228918 ELFN1P0C7U0 828 aa15.57■□□□□ 0.08
LTBR-201ENST00000228918 DBTP11182 482 aaKnown RBP15.57■□□□□ 0.08
LTBR-201ENST00000228918 POLR2EP19388 210 aaKnown RBP15.57■□□□□ 0.08
LTBR-201ENST00000228918 LIMK1P53667 647 aa15.57■□□□□ 0.08
LTBR-201ENST00000228918 PCBP3P57721 371 aaKnown RBP15.57■□□□□ 0.08
LTBR-201ENST00000228918 C2orf80Q0P641 193 aa15.57■□□□□ 0.08
LTBR-201ENST00000228918 CDC20Q12834 499 aa15.57■□□□□ 0.08
LTBR-201ENST00000228918 EIF4HQ15056 248 aaKnown RBP15.57■□□□□ 0.08
LTBR-201ENST00000228918 SLC5A12Q1EHB4 618 aa15.57■□□□□ 0.08
LTBR-201ENST00000228918 ZNF630Q2M218 657 aaPredicted RBP15.57■□□□□ 0.08
LTBR-201ENST00000228918 POM121L1PQ3SYA9 428 aa15.57■□□□□ 0.08
LTBR-201ENST00000228918 CYP27C1Q4G0S4 372 aa15.57■□□□□ 0.08
LTBR-201ENST00000228918 ZNF805Q5CZA5 627 aa15.57■□□□□ 0.08
LTBR-201ENST00000228918 LIPIQ6XZB0 460 aa15.57■□□□□ 0.08
LTBR-201ENST00000228918 STX19Q8N4C7 294 aa15.57■□□□□ 0.08
LTBR-201ENST00000228918 ZNF557Q8N988 423 aaPredicted RBP15.57■□□□□ 0.08
LTBR-201ENST00000228918 OR5AK3PQ8NH89 298 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms