RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 SMIM30A4D0T7 59 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 OR2AG2A6NM03 316 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 ARHGEF33A8MVX0 844 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 FFAR1O14842 300 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 SLITRK5O94991 958 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 GALTP07902 379 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 CD70P32970 193 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 OPRD1P41143 372 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 LIMS1P48059 325 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 OLR1P78380 273 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 MXD1Q05195 221 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 NAE1Q13564 534 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 SCARB2Q14108 478 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 TCTN1Q2MV58 587 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 TBRG1Q3YBR2 411 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 MFSD14CQ5VZR4 134 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 CST9Q5W186 159 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 PLAG1Q6DJT9 500 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 ZNF517Q6ZMY9 492 aaPredicted RBP11.88□□□□□ -0.51
NUP88-201ENST00000225696 CBARPQ8N350 705 aaPredicted RBP11.88□□□□□ -0.51
NUP88-201ENST00000225696 PIK3R3Q92569 461 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 CRELD1Q96HD1 420 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 SGK2Q9HBY8 427 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 ABCB8Q9NUT2 735 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 PAQR5Q9NXK6 330 aaPredicted RBP11.88□□□□□ -0.51
NUP88-201ENST00000225696 IGLV3-16A0A075B6K0 115 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 A0A0B4J293 547 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 SERTM1A2A2V5 107 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 FAM172BPA6NC97 362 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 SGTAO43765 313 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 SEMA7AO75326 666 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 SOX14O95416 240 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 OR56A5P0C7T3 313 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 ZNF8P17098 575 aaPredicted RBP11.88□□□□□ -0.51
NUP88-201ENST00000225696 CBLP22681 906 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 CRYBB2P43320 205 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 XCR1P46094 333 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 MRPS15P82914 257 aaKnown RBP11.88□□□□□ -0.51
NUP88-201ENST00000225696 CAMK2BQ13554 666 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 DUSP7Q16829 419 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 SLC5A12Q1EHB4 618 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 UAP1L1Q3KQV9 507 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 ZFP69Q49AA0 526 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 SNAP47Q5SQN1 464 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 RNF130Q86XS8 419 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 HS6ST3Q8IZP7 471 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 MMP21Q8N119 569 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 DEPDC4Q8N2C3 294 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 ARL14EPQ8N8R7 260 aaPredicted RBP11.88□□□□□ -0.51
NUP88-201ENST00000225696 ASCC1Q8N9N2 400 aaKnown RBP11.88□□□□□ -0.51
NUP88-201ENST00000225696 HUS1BQ8NHY5 278 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 C17orf50Q8WW18 174 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 COQ8BQ96D53 544 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 RNF31Q96EP0 1072 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 TMEM246Q9BRR3 403 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 SLC35A5Q9BS91 424 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 CCDC32Q9BV29 185 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 VN1R3Q9BXE9 311 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 RERGLQ9H628 205 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 RANGRFQ9HD47 186 aaPredicted RBP11.88□□□□□ -0.51
NUP88-201ENST00000225696 CCDC177Q9NQR7 707 aaPredicted RBP11.88□□□□□ -0.51
NUP88-201ENST00000225696 TMEM161AQ9NX61 479 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 DNAJC27Q9NZQ0 273 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 LSM2Q9Y333 95 aaKnown RBP11.88□□□□□ -0.51
NUP88-201ENST00000225696 ANAPC1Q9H1A4 1944 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 TRBV4-1A0A0J9YWV2 114 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 MEIOCA2RUB1 952 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 MGAT4DA6NG13 374 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 ZAR1LA6NP61 321 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 RFXAPO00287 272 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 PLK4O00444 970 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 SCO2O43819 266 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 CCNB2O95067 398 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 HBQ1P09105 142 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 CLEC2LP0C7M8 214 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 IL7P13232 177 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 ATP1B2P14415 290 aaPredicted RBP11.87□□□□□ -0.51
NUP88-201ENST00000225696 PREPP48147 710 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 FLT3LGP49771 235 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 C21orf58P58505 322 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 RPS13P62277 151 aaKnown RBP11.87□□□□□ -0.51
NUP88-201ENST00000225696 EEF1A2Q05639 463 aaKnown RBP11.87□□□□□ -0.51
NUP88-201ENST00000225696 CDK10Q15131 360 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 LIPJQ5W064 366 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 TXNDC8Q6A555 127 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 FRMPD2BQ6IN97 320 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 ZNF783Q6ZMS7 281 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 NLRP8Q86W28 1048 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 GALNT12Q8IXK2 581 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 LAS2Q8IYD9 372 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 OR7G3Q8NG95 312 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 MYLIPQ8WY64 445 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 SCRN2Q96FV2 425 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 SLC6A18Q96N87 628 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 SNX18Q96RF0 628 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 PHOX2BQ99453 314 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 PKP4Q99569 1192 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 GDF15Q99988 308 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 NMNAT1Q9HAN9 279 aaPredicted RBP11.87□□□□□ -0.51
NUP88-201ENST00000225696 C1GALT1Q9NS00 363 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms